prot_Ecto-sp13_S_contig15046.3815.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig15046.3815.1
Unique Name	prot_Ecto-sp13_S_contig15046.3815.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	225

Homology

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BLAST of mRNA_Ecto-sp13_S_contig15046.3815.1 vs. uniprot
Match: A0A6H5KWQ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ4_9PHAE)

HSP 1 Score: 330 bits (845), Expect = 1.290e-100
Identity = 210/225 (93.33%), Postives = 217/225 (96.44%), Query Frame = 0

Query:    1 VLATEAEARIHAARETALAAETSLEATREEARDLRKNHENAMIALAAEMGEKQRRGKEGVAVRLQEKKAKRLAELKKAKAKGDEVQDELARLEQEAEREQKQVEADIEQEAAILEQAEAKMLAKREAEARATRLTAESSRRAGELELQKIRQGHEENQRILEEAQENKRKLRQRVLAERLERRRQEKMNAAIAALESAEAQQKLAASLEQERVAARAELEEELVK 225
            VLATEAEARIHAARETALAAETSLEAT+EEARDLRKNHENAMIALAAEM +KQR+GKEGVA RLQ KKA+RLAELKKAKAK DEVQDELARLEQEAEREQK+VEADIEQEAAILEQAEAKMLA+REAEARATRLTAESSRRAGELELQKIRQ H+ENQRILEEAQENKRKLRQR LAERLERRRQEKMNAAIAA ESAEAQQKLAASLEQERVAA AELEEELVK
Sbjct: 1856 VLATEAEARIHAARETALAAETSLEATQEEARDLRKNHENAMIALAAEMAKKQRQGKEGVAARLQAKKARRLAELKKAKAKDDEVQDELARLEQEAEREQKEVEADIEQEAAILEQAEAKMLARREAEARATRLTAESSRRAGELELQKIRQAHDENQRILEEAQENKRKLRQRALAERLERRRQEKMNAAIAASESAEAQQKLAASLEQERVAASAELEEELVK 2080

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BLAST of mRNA_Ecto-sp13_S_contig15046.3815.1 vs. uniprot
Match: D8LR26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR26_ECTSI)

HSP 1 Score: 309 bits (792), Expect = 1.760e-93
Identity = 196/208 (94.23%), Postives = 199/208 (95.67%), Query Frame = 0

Query:    1 VLATEAEARIHAARETALAAETSLEATREEARDLRKNHENAMIALAAEMGEKQRRGKEGVAVRLQEKKAKRLAELKKAKAKGDEVQDELARLEQEAEREQKQVEADIEQEAAILEQAEAKMLAKREAEARATRLTAESSRRAGELELQKIRQGHEENQRILEEAQENKRKLRQRVLAERLERRRQEKMNAAIAALESAEAQQKLAASL 208
            VLATEAEARIHAARETALAAETSLE T+EEARDLRKNHENAMIALAAEM EKQRRGKEGV  RLQEKKAKRLAELKK KAK DEVQDELARLEQEAEREQKQVEADIEQEAAILEQAEAKMLAKR AEARATRLTAESSRRAGELELQKIRQ HEENQRILEEAQE+KRKLRQR LAERLERRRQEKMNA+IAALESAEAQQKLAASL
Sbjct: 5380 VLATEAEARIHAARETALAAETSLEVTQEEARDLRKNHENAMIALAAEMAEKQRRGKEGVGARLQEKKAKRLAELKKVKAKDDEVQDELARLEQEAEREQKQVEADIEQEAAILEQAEAKMLAKRAAEARATRLTAESSRRAGELELQKIRQAHEENQRILEEAQESKRKLRQRTLAERLERRRQEKMNASIAALESAEAQQKLAASL 5587

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig15046.3815.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig15046.3815.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KWQ4_9PHAE	1.290e-100	93.33	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LR26_ECTSI	1.760e-93	94.23	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 61..120
None	No IPR available	COILS	Coil	Coil	coord: 198..225
None	No IPR available	COILS	Coil	Coil	coord: 17..48
None	No IPR available	COILS	Coil	Coil	coord: 147..181

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig15046	contig	Ecto-sp13_S_contig15046:477..3016 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig15046.3815.1	mRNA_Ecto-sp13_S_contig15046.3815.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig15046 477..3017 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig15046.3815.1 ID=prot_Ecto-sp13_S_contig15046.3815.1|Name=mRNA_Ecto-sp13_S_contig15046.3815.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=225bp
VLATEAEARIHAARETALAAETSLEATREEARDLRKNHENAMIALAAEMG
EKQRRGKEGVAVRLQEKKAKRLAELKKAKAKGDEVQDELARLEQEAEREQ
KQVEADIEQEAAILEQAEAKMLAKREAEARATRLTAESSRRAGELELQKI
RQGHEENQRILEEAQENKRKLRQRVLAERLERRRQEKMNAAIAALESAEA
QQKLAASLEQERVAARAELEEELVK