prot_Ecto-sp13_S_contig15045.3814.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig15045.3814.1
Unique Name	prot_Ecto-sp13_S_contig15045.3814.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	236

Homology

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BLAST of mRNA_Ecto-sp13_S_contig15045.3814.1 vs. uniprot
Match: A0A6H5K2M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M0_9PHAE)

HSP 1 Score: 418 bits (1074), Expect = 2.950e-133
Identity = 221/234 (94.44%), Postives = 225/234 (96.15%), Query Frame = 0

Query:    1 GGSWHDPTSGGGGGRASDGFNVGGGWGLPEHHDLQAFVQWYSHDKQRDIRDGLRRRVSKTLAPLSKARDKAAGKQASKREKATRQAQKRELEASSAREKAATDALERCRAHAEKCSDRTTAAIDSWLAERRRRWEAGKTRCHELAPPVRSHVADGHAFDGGTNHVPAGEQAAAIPGAAVNAAAGLGGTQGGGMTPRDGKASSSWDWGRDGGEGASFEDFFETFAGGDFDEGAGL 234
            GGSWHDP+   GGGRASDGFNVGGGWGLPEHHDLQAFVQWYSHD+QRDIRDGLRRRVSKTL PLSKARDKAAGKQASKREKATRQAQKRELEASSAREKAATDALERCRAHAEKCSDRTTAAIDSWLAERRRRWEAGKTRCHELAPPVRSHVADG+AFDGGTNHVPAGEQAAAIPGAAVNAAAGLGGTQG G TPRDGKAS SW WGRDGGEGA FEDFFETFAGGD+DEGAGL
Sbjct: 1257 GGSWHDPS---GGGRASDGFNVGGGWGLPEHHDLQAFVQWYSHDEQRDIRDGLRRRVSKTLDPLSKARDKAAGKQASKREKATRQAQKRELEASSAREKAATDALERCRAHAEKCSDRTTAAIDSWLAERRRRWEAGKTRCHELAPPVRSHVADGNAFDGGTNHVPAGEQAAAIPGAAVNAAAGLGGTQGVGTTPRDGKASLSWAWGRDGGEGARFEDFFETFAGGDYDEGAGL 1487

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BLAST of mRNA_Ecto-sp13_S_contig15045.3814.1 vs. uniprot
Match: D8LQH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH1_ECTSI)

HSP 1 Score: 419 bits (1076), Expect = 1.800e-131
Identity = 219/233 (93.99%), Postives = 222/233 (95.28%), Query Frame = 0

Query:    3 SWHDPTSGGGGGRASDGFNVGGGWGLPEHHDLQAFVQWYSHDKQRDIRDGLRRRVSKTLAPLSKARDKAAGKQASKREKATRQAQKRELEASSAREKAATDALERCRAHAEKCSDRTTAAIDSWLAERRRRWEAGKTRCHELAPPVRSHVADGHAFDGGTNHVPAGEQAAAIPGAAVNAAAGLGGTQGGGMTPRDGKASSSWDWGRDGGEGASFEDFFETFAGGDFDEGAGLP 235
            SWHDP+   GGGRASDGFNVGGGWGLPEHHDLQAFVQWYSHD+QRD RDGLRRRVSKTLAPLSKARDKAAGKQASKREKATRQAQKRELEASSAREKAATDALERCRAHAEKCSDRTTAAIDSWLAERRRRWEAGKTRCHELAPP RSHVADG+AFDGGTNHVPAGEQAAAIPGAA NAAAGLGGTQGGGM PRDGK S  WDWGRDGGEGASFEDFFETFAGGD DEGAGLP
Sbjct: 3510 SWHDPS---GGGRASDGFNVGGGWGLPEHHDLQAFVQWYSHDEQRDTRDGLRRRVSKTLAPLSKARDKAAGKQASKREKATRQAQKRELEASSAREKAATDALERCRAHAEKCSDRTTAAIDSWLAERRRRWEAGKTRCHELAPPARSHVADGNAFDGGTNHVPAGEQAAAIPGAAANAAAGLGGTQGGGMAPRDGKESLPWDWGRDGGEGASFEDFFETFAGGDDDEGAGLP 3739

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig15045.3814.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig15045.3814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5K2M0_9PHAE	2.950e-133	94.44	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LQH1_ECTSI	1.800e-131	93.99	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 79..99

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig15045	contig	Ecto-sp13_S_contig15045:1790..3291 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig15045.3814.1	mRNA_Ecto-sp13_S_contig15045.3814.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig15045 1790..4267 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig15045.3814.1 ID=prot_Ecto-sp13_S_contig15045.3814.1|Name=mRNA_Ecto-sp13_S_contig15045.3814.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=236bp
GGSWHDPTSGGGGGRASDGFNVGGGWGLPEHHDLQAFVQWYSHDKQRDIR
DGLRRRVSKTLAPLSKARDKAAGKQASKREKATRQAQKRELEASSAREKA
ATDALERCRAHAEKCSDRTTAAIDSWLAERRRRWEAGKTRCHELAPPVRS
HVADGHAFDGGTNHVPAGEQAAAIPGAAVNAAAGLGGTQGGGMTPRDGKA
SSSWDWGRDGGEGASFEDFFETFAGGDFDEGAGLP*