prot_Ecto-sp13_S_contig15045.3813.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15045.3813.1
Unique Nameprot_Ecto-sp13_S_contig15045.3813.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length113
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15045.3813.1 vs. uniprot
Match: D8LQH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH1_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 5.020e-25
Identity = 58/60 (96.67%), Postives = 58/60 (96.67%), Query Frame = 0 
Query:    1 ALPSLSGSSRWSLGSLSLLPTSTAPTSVSCMSDDAEGEQETLATQQTAPQSPQRNKAFFP 60
            ALPSLSGSSRWSLGSLSLLPTSTAPTSVSCMSDDAEGEQETLAT Q APQSPQRNKAFFP
Sbjct: 3273 ALPSLSGSSRWSLGSLSLLPTSTAPTSVSCMSDDAEGEQETLATHQKAPQSPQRNKAFFP 3332
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BLAST of mRNA_Ecto-sp13_S_contig15045.3813.1 vs. uniprot
Match: A0A6H5K2M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M0_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 1.100e-23
Identity = 56/60 (93.33%), Postives = 57/60 (95.00%), Query Frame = 0 
Query:    1 ALPSLSGSSRWSLGSLSLLPTSTAPTSVSCMSDDAEGEQETLATQQTAPQSPQRNKAFFP 60
            ALPSLSGSSRWSLGSLSLLPTSTAPTSVSC+SDDAEGEQETLAT QTAPQSPQRNK  FP
Sbjct: 1040 ALPSLSGSSRWSLGSLSLLPTSTAPTSVSCISDDAEGEQETLATHQTAPQSPQRNKIVFP 1099
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15045.3813.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQH1_ECTSI5.020e-2596.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K2M0_9PHAE1.100e-2393.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15045contigEcto-sp13_S_contig15045:750..1393 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15045.3813.1mRNA_Ecto-sp13_S_contig15045.3813.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15045 750..1395 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15045.3813.1 ID=prot_Ecto-sp13_S_contig15045.3813.1|Name=mRNA_Ecto-sp13_S_contig15045.3813.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=113bp
ALPSLSGSSRWSLGSLSLLPTSTAPTSVSCMSDDAEGEQETLATQQTAPQ
SPQRNKAFFPPTPPPFNSAAAGSWPPSAPGGSMSSYFAASSGAAGGAADG
AARNGGASGSGGA
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