prot_Ecto-sp13_S_contig15044.3812.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15044.3812.1
Unique Nameprot_Ecto-sp13_S_contig15044.3812.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length349
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15044.3812.1 vs. uniprot
Match: A0A6H5JZQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ7_9PHAE)

HSP 1 Score: 392 bits (1008), Expect = 1.020e-122
Identity = 260/351 (74.07%), Postives = 264/351 (75.21%), Query Frame = 0 
Query:    1 SKVTGFVPREDGGLSALEMHGQLLEGDVLTHLNGSNARLLDFTDILKACRGPDRGGLPRPLVMKFSRSEALSPPASPVPSXXXXPTAERGQAAAVTSKTDAXXXXXXXXXXXXXGASSLLADLDDFMGGLSLPGGEARIPGMSHIKGVFRAELQAQGMLGGSGDGGDAGGDAEGSGNSGEPSPPGEGLFLNMLRRLENVDVTGEDSPRAAAXXXXXXXXXXAANGFNRDESRGGGGDGAEVTAQGTYHQEVATPGGGGVGSSFAGVGAKLRSKFRKPGRGFGLPQGVSGRGGGGGG---DQTVGGATEGVGEGGKAFVEGASKALAVNRERMMGWMKELRPKDWSPKEAER 348
            +KVTGFVPREDGGLSALEMHGQLLEGDVLTHLNGSNARLLDFTDILKACRGPDRGGLPRPLVMKFSRSEALSPPASP   XXXX TAERGQA+A TSKTDAXXXXXXXXXXXXXGASSLLADLDDFMGGLSLPGGEARIPGMSHIKGVFRAELQAQGMLGGSGDG              + SPPGEGLFLNMLRRLENVDV GEDSPR AA XXXXXXXX                  A+  A G                                  GFGLPQGV GRG        DQTVGGATEGVGEGGKAFVEGASKALAVNRERMMGWMKELRPKDWSPKEAER
Sbjct:   76 AKVTGFVPREDGGLSALEMHGQLLEGDVLTHLNGSNARLLDFTDILKACRGPDRGGLPRPLVMKFSRSEALSPPASPAXXXXXXXTAERGQASAATSKTDAXXXXXXXXXXXXXGASSLLADLDDFMGGLSLPGGEARIPGMSHIKGVFRAELQAQGMLGGSGDGXXXXXXXXXXXXXXDSSPPGEGLFLNMLRRLENVDVAGEDSPRVAAAXXXXXXXX------------------ADGVANG----------------------------------GFGLPQGVGGRGXXXXXXXXDQTVGGATEGVGEGGKAFVEGASKALAVNRERMMGWMKELRPKDWSPKEAER 374
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BLAST of mRNA_Ecto-sp13_S_contig15044.3812.1 vs. uniprot
Match: D7FQI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI4_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 5.290e-75
Identity = 143/147 (97.28%), Postives = 144/147 (97.96%), Query Frame = 0 
Query:    1 SKVTGFVPREDGGLSALEMHGQLLEGDVLTHLNGSNARLLDFTDILKACRGPDRGGLPRPLVMKFSRSEALSPPASPVPSXXXXPTAERGQAAAVTSKTDAXXXXXXXXXXXXXGASSLLADLDDFMGGLSLPGGEARIPGMSHIKG 147
            +KVTGFVPREDGGLSALEMHGQLLEGDVLTHLNGSNARLLDFTDILKACRGPDRGGLPRPLVMKFSRSEALSPPASP P XXXX TAERGQAAAVTSKTDAXXXXXXXXXXXXXGASSLLADLDDFMGGLSLPGGEARIPGMSHIKG
Sbjct:   76 AKVTGFVPREDGGLSALEMHGQLLEGDVLTHLNGSNARLLDFTDILKACRGPDRGGLPRPLVMKFSRSEALSPPASPAPXXXXXXTAERGQAAAVTSKTDAXXXXXXXXXXXXXGASSLLADLDDFMGGLSLPGGEARIPGMSHIKG 222
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15044.3812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JZQ7_9PHAE1.020e-12274.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQI4_ECTSI5.290e-7597.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15044contigEcto-sp13_S_contig15044:156..2496 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15044.3812.1mRNA_Ecto-sp13_S_contig15044.3812.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15044 155..2496 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15044.3812.1 ID=prot_Ecto-sp13_S_contig15044.3812.1|Name=mRNA_Ecto-sp13_S_contig15044.3812.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=349bp
SKVTGFVPREDGGLSALEMHGQLLEGDVLTHLNGSNARLLDFTDILKACR
GPDRGGLPRPLVMKFSRSEALSPPASPVPSPPASPTAERGQAAAVTSKTD
AAGGGASGGGGATSGASSLLADLDDFMGGLSLPGGEARIPGMSHIKGVFR
AELQAQGMLGGSGDGGDAGGDAEGSGNSGEPSPPGEGLFLNMLRRLENVD
VTGEDSPRAAAAAAAATAADGAANGFNRDESRGGGGDGAEVTAQGTYHQE
VATPGGGGVGSSFAGVGAKLRSKFRKPGRGFGLPQGVSGRGGGGGGDQTV
GGATEGVGEGGKAFVEGASKALAVNRERMMGWMKELRPKDWSPKEAERT
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