prot_Ecto-sp13_S_contig15039.3809.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15039.3809.1
Unique Nameprot_Ecto-sp13_S_contig15039.3809.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length198
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15039.3809.1 vs. uniprot
Match: A0A6H5KWQ1_9PHAE (Polynucleotide adenylyltransferase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ1_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 5.460e-29
Identity = 88/122 (72.13%), Postives = 91/122 (74.59%), Query Frame = 0 
Query:    1 MTTIPADGNGXXXXXXXXXXXXXXAPNRSSNAQRPATARVIPPGDATAAGDMTADVAVSKGRGGGGDVAGTVGAAKLRRARPQGVGGRVAAAAAXXXXXXXXAGTAAVARVKEAAVHSRGVA 122
            MT IP DG+    XXXXXXXXX   P RSSNA    TARVIPPG ATAAGDM  DVAV KG GGGGDVAGTVGAA+LRRARP+GVG RV AAAA        AG A VARVKEAAVHSRGVA
Sbjct:  668 MTIIPGDGDDNAAXXXXXXXXXSPVPKRSSNA----TARVIPPGGATAAGDMAVDVAVPKGSGGGGDVAGTVGAARLRRARPRGVGARVPAAAAATTIAVTAAGAAGVARVKEAAVHSRGVA 785
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15039.3809.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KWQ1_9PHAE5.460e-2972.13Polynucleotide adenylyltransferase (Fragment) n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15039contigEcto-sp13_S_contig15039:862..1455 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15039.3809.1mRNA_Ecto-sp13_S_contig15039.3809.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15039 783..1559 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15039.3809.1 ID=prot_Ecto-sp13_S_contig15039.3809.1|Name=mRNA_Ecto-sp13_S_contig15039.3809.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=198bp
MTTIPADGNGNTAAAAGGGSGSSPAPNRSSNAQRPATARVIPPGDATAAG
DMTADVAVSKGRGGGGDVAGTVGAAKLRRARPQGVGGRVAAAAAATTIAA
TSAGTAAVARVKEAAVHSRGVAGDGGGGGRGAGGRGGQKEIGAPAKRRRK
SGNGSNGAAAAPGAGGGGGGEAGGNRGDAGSVGKGRGGLAATVRPNE*
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