mRNA_Ecto-sp13_S_contig1502.3798.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1502.3798.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 535 bits (1378), Expect = 1.600e-178 Identity = 476/666 (71.47%), Postives = 484/666 (72.67%), Query Frame = 1
Query: 1 MDSADTPKVSRGEGQRFDIGCESYTPQMWMQDLELLRASGASMADFTALHSAATYNRVDFVQLMLANGYEKDAVSDIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRGHLAATRALLDAGADATLRPYDNAGMCXXXXXXXXXXXXXXXXXXXXXXDVNAAGPNGNTALHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGNIAATQALLDAGADASSRSEGEASSALDCAVCQGYTDVVRVIIEHGINVNISDVDGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVALRQNGVGLSXXXXXXXXXXXXXXXXXXXXXXXVNAKVNNGITALXXXXXXXXXXXXXXXXXXXXXXXXQANGSTPLH------------------------NAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVGLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILCRAHYHGGRVQFGHRTSQAPAIGVAKRTRSSEEPSRAERDWAGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL 1926
MDSADTP+VS EG++FDIGCESYTPQMWMQDLELLRASGA+M DF AL SAATYNRVDFVQLMLANGYEKDA+SDIG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LDAGADATLRP DNAGMCXXXXXXXXXXXXXXXXXXXXXXDVNAA PNGNTALHI GEGN+AATQALLDAGADASS+SEGEASSALDCAVCQGYTDVVRV IEH I+VNISDVDGK DVALRQNGVGLS XXXXXXXXXXXXXXXXXX VNAKVNNGITAL QANGSTPLH NAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMV LKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLIL RAHY GGRVQFGHRTSQAPA GVAKRTRSSEEPSRAE DWAGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL
Sbjct: 130 MDSADTPEVSPREGKQFDIGCESYTPQMWMQDLELLRASGANMTDFNALQSAATYNRVDFVQLMLANGYEKDALSDIGFTPLYHAAIMGHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDAGADATLRPDDNAGMCXXXXXXXXXXXXXXXXXXXXXXDVNAAVPNGNTALHIAAIEDEADMVLLLCSKGAGKDSINSQGSTPLQMAAGEGNVAATQALLDAGADASSQSEGEASSALDCAVCQGYTDVVRVKIEHEIDVNISDVDGKTALHHAVAAGKVEMGCTPLHLVAMAGRAAAAQALLDAGA-----------------DVALRQNGVGLSSXXXXXXXXXXXXXXXXXXHGGDVNAKVNNGITALRVASAFDKAPAIDVLTEAGANIEAQANGSTPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRAEIDWAGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL 778
BLAST of mRNA_Ecto-sp13_S_contig1502.3798.1 vs. uniprot
Match: D7FQ25_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ25_ECTSI) HSP 1 Score: 347 bits (890), Expect = 1.500e-108 Identity = 445/524 (84.92%), Postives = 448/524 (85.50%), Query Frame = 1
Query: 82 MWMQDLELLRASGASMADFTALHSAATYNRVDFVQLMLANGYEKDAVSDIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRGHLAATRALLDAGADATLRPYDNAGMCXXXXXXXXXXXXXXXXXXXXXXDVNAAGPNGNTALHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGNIAATQALLDAGADASSRSEGEASSALDCAVCQGYTDVVRVIIEHGINVNISDVDGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVALRQNGVGLSXXXXXXXXXXXXXXXXXXXXXXXVNAKVNNGITALXXXXXXXXXXXXXXXXXXXXXXXXQANGSTPLHNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVGLKTEESDSLAEDVDRVRKLL 1653
MWMQDLELLRASGA+MADFTALHSAATYNRVDFVQLMLANGYEKDA+SDIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX HLAATRALLDAGADATLRP DNAGMC XXXXXXXXXXXXXX DVNAAGPNGNTALHI GEGNIAATQALLD GADA SRSEGEASSALDCAVCQGYTDVVRVIIEHGI+VNISDVDGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVALRQNGVGLSXXXXXXXXXXXXXXXXXXXXXXX NAKVNNGITAL XXXXXXX NAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVGLKTEESDSLAEDVDRVRKLL
Sbjct: 1 MWMQDLELLRASGANMADFTALHSAATYNRVDFVQLMLANGYEKDALSDIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLAATRALLDAGADATLRPDDNAGMCALDXXXXXXXXXXXXXXIEHGVDVNAAGPNGNTALHIAAIEDEADMVLLLCSKGAGKDSINSQGSTPLQMAAGEGNIAATQALLDVGADAGSRSEGEASSALDCAVCQGYTDVVRVIIEHGIDVNISDVDGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVALRQNGVGLSXXXXXXXXXXXXXXXXXXXXXXXXNAKVNNGITALHVASAFDKAPAIDVLIEXXXXXXXXXXXXXXXXNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVGLKTEESDSLAEDVDRVRKLL 524
BLAST of mRNA_Ecto-sp13_S_contig1502.3798.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 111 bits (278), Expect = 9.270e-23 Identity = 78/168 (46.43%), Postives = 94/168 (55.95%), Query Frame = 1
Query: 1462 TPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVGLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILCRAHYHGGRVQFGHRTSQAPAIGVAKRTRSSEEPSRAER-------------DWAGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL 1926
TPL +AG G AE+V+ LLR GADET + G+ A DM+G EE D L EDV+RVR+LLA APADRAWRRRG+LI+CRA RV TS VA+RTRS + +RA +WA VVS + ISL +G IF IV YL
Sbjct: 245 TPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQ--PDRVPERRMTSGTHYTNVARRTRSRAKMARARGIAGESTVDESTGGNWAVVVSKV-------ISLQEEG---IFRTIVEYL 400
BLAST of mRNA_Ecto-sp13_S_contig1502.3798.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 93.2 bits (230), Expect = 1.100e-16 Identity = 50/82 (60.98%), Postives = 59/82 (71.95%), Query Frame = 1
Query: 1468 LHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVGLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILCRA 1713
L VA +AG G E+VDLLLR GADET V+ NG AAD +G+K E D + E+ + VRKLLA APADRAWRRR L+LCRA
Sbjct: 266 LEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRA 347
BLAST of mRNA_Ecto-sp13_S_contig1502.3798.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI) HSP 1 Score: 89.7 bits (221), Expect = 1.800e-15 Identity = 64/163 (39.26%), Postives = 81/163 (49.69%), Query Frame = 1
Query: 1489 AGSPGTAEMVDLLLRRGADETAVSENGHTAADMVGLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILCRAHYHGGRVQFGHRTSQAPAIGVAKRTRSSEE-----------------PSRAERDWAGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL 1926
AG G E+VDLLLR ADET GHT ++VG T E+DS+ +V RV KLL AP DRAWRRRG L+LCRAH R+ S V + TRS + R R+W+ +V ++G + +G IF IVGYL
Sbjct: 250 AGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPE--RLGLRQNASHVQESTVLRVTRSRTKLVEREQVAGGSGEGAAADGRTAREWSNMVYRVLG--------LDEG---IFRTIVGYL 399
BLAST of mRNA_Ecto-sp13_S_contig1502.3798.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI) HSP 1 Score: 87.0 bits (214), Expect = 1.660e-14 Identity = 57/119 (47.90%), Postives = 72/119 (60.50%), Query Frame = 1
Query: 1480 AAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVGLKTEESDSL-AEDVDRVRKLLARAPADRAWRRRGFLILCRAHYHGGRVQFGHRTSQAPAIGVAKRTRSSEEPSRAERDWAG 1833
A+ AG G+AE+VDLLLRRGADET NG AD VG E D L +V V +LLA APADRAWRRRG L+LCRA R++ G+++RTRS + +R++ AG
Sbjct: 269 ASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLR--QEDGGDTRGGLSRRTRSRAKLARSDAVGAG 385
BLAST of mRNA_Ecto-sp13_S_contig1502.3798.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 86.7 bits (213), Expect = 2.600e-14 Identity = 48/89 (53.93%), Postives = 63/89 (70.79%), Query Frame = 1
Query: 1459 QTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVGLKTEESDSLA--EDVDRVRKLLARAPADRAWRRRGFLILCRAHY 1719
+TPL + A +AG G +VD+LLR GADETA++ +G TAA++VG E + +DV+RVR LL AP DRAWRRRGFL+LCRA +
Sbjct: 206 ETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFW 294
BLAST of mRNA_Ecto-sp13_S_contig1502.3798.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI) HSP 1 Score: 85.9 bits (211), Expect = 3.080e-14 Identity = 50/82 (60.98%), Postives = 60/82 (73.17%), Query Frame = 1
Query: 1501 GTAEMVDLLLRRGADETAVSENGHTAADMVGLKT-EESDSLAEDVDRVRKLLARAPADRAWRRRGFLILCRAHYHGGRVQFG 1743
G+A++VDLLLR GADET VS+ G TAAD +G + +D ED +R R LLARAPADRAWRRRG L+LCRAH R+Q G
Sbjct: 288 GSAQVVDLLLRWGADETIVSKQGETAADSIGTRRCHRTDP--EDDERARSLLARAPADRAWRRRGLLVLCRAH--PDRLQLG 365
BLAST of mRNA_Ecto-sp13_S_contig1502.3798.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 7.270e-14 Identity = 53/114 (46.49%), Postives = 72/114 (63.16%), Query Frame = 1
Query: 1459 QTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVGLKTEESDSLA--EDVDRVRKLLARAPADRAWRRRGFLILCRAHYHGGRVQFGHRTSQAPAIGVAKRTRS 1794
+TPL + A +AG G +VD+LLR GADETA++ +G TAA++VG E + +D++RVR LL APADRAWRRRG L+LCRA + R R + + A G+ R S
Sbjct: 255 ETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFWIKSRRL---RAASSSARGIGPRAMS 365
BLAST of mRNA_Ecto-sp13_S_contig1502.3798.1 vs. uniprot
Match: D8LTL5_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTL5_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 1.230e-11 Identity = 60/173 (34.68%), Postives = 86/173 (49.71%), Query Frame = 1
Query: 1462 TPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVGLKTEES---DSLAEDVDRVRKLLARAPADRAWRRRGFLILCRAHYHGGRVQFGHRTSQAPAIGVAKRTRSSEEPSRAER---------------DWAGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL 1926
TPLH ++ G V+LLLRRGADE +E G AD+VG + + + D R+R++LARAPADR+WRRRG L+L R+ RVQ +R+S +IG +K + P+ + DW +V L I L DG +F +VG++
Sbjct: 223 TPLHRACKRSSVTG----VELLLRRGADEELTNEEGDAPADIVGASPSNATVDEEIEVDNQRIRRMLARAPADRSWRRRGLLVLSRSC--PTRVQIANRSSSGSSIGSSKGCFAKVSPASRKNSGGDNEETGDQMVMVDWRYLVCRL-------IELEVDG---LFRLVVGFV 379 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1502.3798.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1502.3798.1 >prot_Ecto-sp13_S_contig1502.3798.1 ID=prot_Ecto-sp13_S_contig1502.3798.1|Name=mRNA_Ecto-sp13_S_contig1502.3798.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=643bp MDSADTPKVSRGEGQRFDIGCESYTPQMWMQDLELLRASGASMADFTALHback to top mRNA from alignment at Ecto-sp13_S_contig1502:12918..14918+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1502.3798.1 ID=mRNA_Ecto-sp13_S_contig1502.3798.1|Name=mRNA_Ecto-sp13_S_contig1502.3798.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2001bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1502:12918..14918+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1502:12918..14918+ >mRNA_Ecto-sp13_S_contig1502.3798.1 ID=mRNA_Ecto-sp13_S_contig1502.3798.1|Name=mRNA_Ecto-sp13_S_contig1502.3798.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1929bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1502:12918..14918+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |