mRNA_Ecto-sp13_S_contig15013.3795.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15013.3795.1 vs. uniprot
Match: A0A6H5K5H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H9_9PHAE) HSP 1 Score: 64.3 bits (155), Expect = 1.410e-10 Identity = 39/76 (51.32%), Postives = 44/76 (57.89%), Query Frame = 1
Query: 1 GRYEEAEPLHEPS*VIGETMLGPEHPGVATSLNNRALLLEHH---------------GEYAEG*PLYERSLAVFEK 183
G+Y EAEPL+E I ET LGPEHP VAT+LNNRA LLE G+Y E PLY SLA+ EK
Sbjct: 31 GKYAEAEPLYERWQAIFETALGPEHPNVATALNNRAGLLEDQRRQTNFSPPLPVTFQGKYEEAEPLYMLSLAIDEK 106
BLAST of mRNA_Ecto-sp13_S_contig15013.3795.1 vs. uniprot
Match: A0A1J5RTI5_9ZZZZ (Tetratricopeptide repeat protein n=1 Tax=mine drainage metagenome TaxID=410659 RepID=A0A1J5RTI5_9ZZZZ) HSP 1 Score: 59.3 bits (142), Expect = 1.790e-9 Identity = 28/63 (44.44%), Postives = 41/63 (65.08%), Query Frame = 1
Query: 1 GRYEEAEPLHEPS*VIGETMLGPEHPGVATSLNNRALLLEHHGEYAEG*PLYERSLAVFEKAV 189
G Y + + + VI E +GP+HP VATSLNN A + H G+YA+ LY+RSL +++KA+
Sbjct: 40 GEYARGAEVTKSAIVIAEQEMGPDHPEVATSLNNLAAIYVHQGKYAQAVLLYKRSLTIYKKAL 102
BLAST of mRNA_Ecto-sp13_S_contig15013.3795.1 vs. uniprot
Match: A0A6H5KN14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN14_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 3.560e-9 Identity = 38/83 (45.78%), Postives = 50/83 (60.24%), Query Frame = 1
Query: 1 GRYEEAEPLHEPS*VIGETMLGPEHPGVATSLNNRALLL-----------EHHGEYAEG*PLYERSLAVFEKAVVWIARILPR 216
G++ EAEPL+ + I ET LGPEHP VAT+LNNRA LL + G++ + PLY+RSLAV + VV A + R
Sbjct: 2 GKFAEAEPLYRRATEIWETALGPEHPHVATALNNRAGLLIKQVLNNRGLLKAQGKHDQVGPLYDRSLAVEKGGVVESAALNNR 84
BLAST of mRNA_Ecto-sp13_S_contig15013.3795.1 vs. uniprot
Match: UPI001BE10FAB (tetratricopeptide repeat protein n=1 Tax=Klebsiella pneumoniae TaxID=573 RepID=UPI001BE10FAB) HSP 1 Score: 55.5 bits (132), Expect = 1.240e-8 Identity = 25/42 (59.52%), Postives = 33/42 (78.57%), Query Frame = 1
Query: 61 LGPEHPGVATSLNNRALLLEHHGEYAEG*PLYERSLAVFEKA 186
LGP+HP VATSLNN A L G+YA+ PL++RSLA++E+A
Sbjct: 2 LGPDHPDVATSLNNLAELYRSQGQYAQAEPLFKRSLAIWERA 43
BLAST of mRNA_Ecto-sp13_S_contig15013.3795.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE) HSP 1 Score: 59.3 bits (142), Expect = 1.420e-8 Identity = 29/40 (72.50%), Postives = 32/40 (80.00%), Query Frame = 1
Query: 1 GRYEEAEPLHEPS*VIGETMLGPEHPGVATSLNNRALLLE 120
G+Y EAEPL+E S I E +LGPEHP V TSLNNRALLLE
Sbjct: 661 GKYAEAEPLYERSQAIQENVLGPEHPDVGTSLNNRALLLE 700
BLAST of mRNA_Ecto-sp13_S_contig15013.3795.1 vs. uniprot
Match: A0A256BF49_9CYAN (Uncharacterized protein n=1 Tax=Pseudanabaena sp. SR411 TaxID=1980935 RepID=A0A256BF49_9CYAN) HSP 1 Score: 54.7 bits (130), Expect = 3.160e-8 Identity = 26/48 (54.17%), Postives = 34/48 (70.83%), Query Frame = 1
Query: 46 IGETMLGPEHPGVATSLNNRALLLEHHGEYAEG*PLYERSLAVFEKAV 189
I E LG +HP VA SLNN ALL E G+Y+E PLY R++ +F+KA+
Sbjct: 6 ILERQLGADHPSVAASLNNLALLYEAQGKYSEAEPLYLRAIQIFKKAL 53
BLAST of mRNA_Ecto-sp13_S_contig15013.3795.1 vs. uniprot
Match: A0A6H5K0C4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0C4_9PHAE) HSP 1 Score: 57.0 bits (136), Expect = 6.470e-8 Identity = 27/43 (62.79%), Postives = 32/43 (74.42%), Query Frame = 1
Query: 43 VIGETMLGPEHPGVATSLNNRALLLEHHGEYAEG*PLYERSLA 171
I E +LGP+HP +AT+LNNRA LLE G+Y E PLYERS A
Sbjct: 84 AIKEKVLGPDHPSLATTLNNRAGLLEAQGKYVEAEPLYERSQA 126
BLAST of mRNA_Ecto-sp13_S_contig15013.3795.1 vs. uniprot
Match: A0A1A9NP79_9PROT (Uncharacterized protein n=2 Tax=Methylobacillus sp. MM3 TaxID=1848039 RepID=A0A1A9NP79_9PROT) HSP 1 Score: 57.0 bits (136), Expect = 9.130e-8 Identity = 31/63 (49.21%), Postives = 41/63 (65.08%), Query Frame = 1
Query: 1 GRYEEAEPLHEPS*VIGETMLGPEHPGVATSLNNRALLLEHHGEYAEG*PLYERSLAVFEKAV 189
G Y+ A + S + E GP+HP VATSLNN A L + G+YA+ PLY+RSLA+ EKA+
Sbjct: 38 GNYDNAMATIKKSLQVAERG-GPDHPNVATSLNNLAALYKAKGQYADAEPLYQRSLAIREKAL 99
BLAST of mRNA_Ecto-sp13_S_contig15013.3795.1 vs. uniprot
Match: A0A6H5K4D0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D0_9PHAE) HSP 1 Score: 56.6 bits (135), Expect = 1.290e-7 Identity = 38/93 (40.86%), Postives = 45/93 (48.39%), Query Frame = 1
Query: 1 GRYEEAEPLHEPS*VIGETMLGPEHPGVATSLNN------------------------------RALLLEHHGEYAEG*PLYERSLAVFEKAV 189
G+Y+EA L+E S I E LGP+HP VA SLNN RALLL+ G Y E LYERSLA+ EKA+
Sbjct: 832 GKYDEAGKLYERSLAIREKALGPDHPDVAQSLNNWAVLLESQVRAIRIPGSFLWYPIDSGVLNNRALLLKAQGNYDEAGKLYERSLAIREKAL 924
BLAST of mRNA_Ecto-sp13_S_contig15013.3795.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI) HSP 1 Score: 56.2 bits (134), Expect = 1.760e-7 Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 1
Query: 1 GRYEEAEPLHEPS*VIGETMLGPEHPGVATSLNNRALLLE 120
G+Y EAEPL+E S I E +LGPEHP VATSL+NRA LLE
Sbjct: 694 GKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLLE 733 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15013.3795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15013.3795.1 >prot_Ecto-sp13_S_contig15013.3795.1 ID=prot_Ecto-sp13_S_contig15013.3795.1|Name=mRNA_Ecto-sp13_S_contig15013.3795.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=70bp MRKPSRCMSRHRSSERRCWAQSTLVWPHRSTTGRCCWSTTASTLRASHCTback to top mRNA from alignment at Ecto-sp13_S_contig15013:2422..2917- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15013.3795.1 ID=mRNA_Ecto-sp13_S_contig15013.3795.1|Name=mRNA_Ecto-sp13_S_contig15013.3795.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=496bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15013:2422..2917- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15013:2422..2917- >mRNA_Ecto-sp13_S_contig15013.3795.1 ID=mRNA_Ecto-sp13_S_contig15013.3795.1|Name=mRNA_Ecto-sp13_S_contig15013.3795.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=210bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15013:2422..2917- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |