prot_Ecto-sp13_S_contig1501.3793.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1501.3793.1
Unique Nameprot_Ecto-sp13_S_contig1501.3793.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length552
Homology
BLAST of mRNA_Ecto-sp13_S_contig1501.3793.1 vs. uniprot
Match: D8LLD7_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLD7_ECTSI)

HSP 1 Score: 923 bits (2386), Expect = 0.000e+0
Identity = 488/553 (88.25%), Postives = 508/553 (91.86%), Query Frame = 0
Query:    1 MKVSPDMRLSWLQRWQSMDEDGSNLLDYTEFLQACGLRDNMWSWRMFNLLDKKFVEVAFRMCSRRGSTWDPDKSVLDEKDIRLFVEERIWRHL-SSGFKEGLTSARARWARSMSPAELSSSVKTASKRATKHLAESARDISQGGGAIRQLSTRKMADTRDWLKVESEMLTEAAKGAARDVEKFARLKATVAVAIAVNRMRALAEAARQARQAKRKYEPDGETAPNTGKRVGEAAKVGGEETLAALRRSFVATTAARYFSEAGKDVAQGGLRRHDQQRPTSANLEGGDPDVADNGDGLLLGEDEDSEDSQRARDDDESEVPATAEENPWDILTDAKAKAEVKVFQERHWAVTEKFYENLVTATERLEEKRTREKGYDFSADFPKLWCAANMRGSQGEREIQYRRKRRSSATKRAANVYLRFITLWQARHQVAGNDSGRSKLAKAFNRWRLNTCDATVDDLSGSLSTLGRGGTAASEESSTHPPRHIPSLKEMWESAAAY-EGEGTHLHAIIMRKAQADRPLPRELCEAYEREMVERIDRRQAENNVPIVPMPIC 551
            M VSPDMRLSWLQRWQSMDEDGSNLLDY EFLQAC LRDNMWSWRMFNLLDK FVEVAFRMCSRRGSTWDPDKSVLDEKDIRLFVEERI  HL + G K+G TSARARWARSMSPAELSS VK ASKR TKHLAESARDISQ GGAIR+LS RKMADTRDWLKVESEMLTEAAKGAARD+EKF RLKATV VA+AVNRMRALAEAARQ         PDGETA NTGKRVGEAAKVGGE+ L+ALRRSFVA TAARYFSEAG D A+G LRRHDQQRPTSANLEGGDP+VAD+GDG+LLGEDEDSEDSQRAR+D ESEVPATA E PWDILTDAKAKAEVK+FQERHWAVTEKFY NLVTA+ERLEEKRT+EKGYDFSADFPKLWCAANMRGSQGEREIQYRRKRRSSA+K+AANVYLRFITLWQ    VAG+DSGRSKLAKAFNRWRLNTCDA VDDLSGSLSTL RGGTAASEESST+ PRHIPSLKEMWESAAA  EGEGTH+HAIIMRKAQADRPLPRELCEAYEREMVERIDRRQAENNVPIVPMPIC
Sbjct:    1 MNVSPDMRLSWLQRWQSMDEDGSNLLDYPEFLQACELRDNMWSWRMFNLLDKNFVEVAFRMCSRRGSTWDPDKSVLDEKDIRLFVEERILHHLYNEGLKDGPTSARARWARSMSPAELSSPVKIASKRETKHLAESARDISQSGGAIRELSARKMADTRDWLKVESEMLTEAAKGAARDLEKFGRLKATVTVAVAVNRMRALAEAARQ--------RPDGETARNTGKRVGEAAKVGGEKALSALRRSFVAITAARYFSEAGPDPARGELRRHDQQRPTSANLEGGDPNVADSGDGMLLGEDEDSEDSQRAREDFESEVPATAVEKPWDILTDAKAKAEVKMFQERHWAVTEKFYANLVTASERLEEKRTKEKGYDFSADFPKLWCAANMRGSQGEREIQYRRKRRSSASKKAANVYLRFITLWQ----VAGDDSGRSKLAKAFNRWRLNTCDAAVDDLSGSLSTLSRGGTAASEESSTYAPRHIPSLKEMWESAAAAGEGEGTHVHAIIMRKAQADRPLPRELCEAYEREMVERIDRRQAENNVPIVPMPIC 541          
BLAST of mRNA_Ecto-sp13_S_contig1501.3793.1 vs. uniprot
Match: A0A6H5JXQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ3_9PHAE)

HSP 1 Score: 735 bits (1897), Expect = 8.220e-260
Identity = 438/703 (62.30%), Postives = 464/703 (66.00%), Query Frame = 0
Query:    1 MKVSPDMRLSWLQRWQSMDEDGSNLLDYTEFLQACGLRDNMWSWRMFNLLDKKFVEVAFRMCSRRGSTWDPDKSVLD--------------------------------EKDIRLFVEERIWRHLSSG-----------------------------------------------------------------FKEGLTSARARWARSMSPAELSSSVKTASKRATKHLAESARDISQGGGAIRQLSTRKMADTRDWLKVESEMLTEAAKGAARDVEKFARLKATVAVAIAVNRMRALAEAARQARQAKRKYEPDGETAPNTGKRVGEAAKVGGEETLAALRRSFVATTAARYFSEAGKDVAQGGLRRHDQQRPTSANLEGGDPDVADNGDGLLLGEDEDSEDSQRARDDDESEVPATAEENPWDILTDAKAKAEVKVFQERHWAVTEKFYENLVTATERLEEKRTREKG------------------------------YDFSADFPKLWCAANMRGSQGEREIQYRRKRRSSATKRAANVYLRF------------ITLWQA------------RHQVAGNDSGRSKLAKAFNRWRLNTCDATVDDLSGSLSTLGRGGTAASEESSTHPPRHIPSLKEMWESAAAY-EGEGTHLHAIIMRKAQADRPLPRELCEAYEREMVERIDRRQAENNVPIVPMPIC 551
            MKVS DMRLSWLQRWQSMDEDGSNLLDYTEFLQACGLRDN+WSWRMFNLLDK FV V       RG     ++ V                                  +K  R+  E  I RHL+SG                                                                 F E LT ARARWARSMSPAELSSSVKTASKRATKHLAESARDISQ GGAIRQLS RKMADTR WLKVESEMLTEAAKGAARD+EKF RLKA   VA+A                      PD ETA  TGKRVGEAAKVGGE+ LAALRRSFVA TA RYFSEA KD A+GGLRR DQQRPTSANL GGDPDVAD+G G+LLG DEDSEDSQRAR+DDESEVPATAEE  WDILTDAKAKAEVKVFQERHWA TEKFYENLVTATERLEEK+T+EKG                              YDFSADFPKLWC A MR SQGER+IQYRRKRRSSA+K+AANV++               T+WQ             +HQ AG+DSGRSKLAKAFNRWRLNTCDA VDDLSGSLSTL +GG AASEESST+ PRHIPSL EMWESAAA  EGEGTHLHAIIM+K QADRPLPRELCEAYEREMVERIDRRQAENNVPIVPMPIC
Sbjct:    1 MKVSSDMRLSWLQRWQSMDEDGSNLLDYTEFLQACGLRDNIWSWRMFNLLDKNFVGVMEAYLGARGFVTAVNRRVAAAAQRQFQTMALAAASKKMQVLNGMSSIGNTTAKKIRRVASESSIGRHLNSGGNERPTVAKPGDVVMKRLKLWTTATSAVDSERPLTTRVERVRATLRRVVSDSDLGNIGKSERSAKFGESLTGARARWARSMSPAELSSSVKTASKRATKHLAESARDISQSGGAIRQLSARKMADTRGWLKVESEMLTEAAKGAARDLEKFGRLKAIATVAVA---------------------RPDDETARKTGKRVGEAAKVGGEKALAALRRSFVAITAVRYFSEAVKDAARGGLRRQDQQRPTSANL-GGDPDVADSGYGMLLGGDEDSEDSQRAREDDESEVPATAEEKLWDILTDAKAKAEVKVFQERHWAATEKFYENLVTATERLEEKKTKEKGKYSILNGIVGKKQFLNVTPCLPLRSGYEKRYDFSADFPKLWCVATMRDSQGERKIQYRRKRRSSASKKAANVFMCLGLDVNRQRKREQSTVWQVLASIQNNKLVLQQHQEAGDDSGRSKLAKAFNRWRLNTCDAAVDDLSGSLSTLSKGGRAASEESSTNAPRHIPSLMEMWESAAAAGEGEGTHLHAIIMKKVQADRPLPRELCEAYEREMVERIDRRQAENNVPIVPMPIC 681          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1501.3793.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLD7_ECTSI0.000e+088.25EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JXQ3_9PHAE8.220e-26062.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 19..31
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 6..41
score: 8.237
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 12..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1501contigEcto-sp13_S_contig1501:9511..15939 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1501.3793.1mRNA_Ecto-sp13_S_contig1501.3793.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1501 9511..15939 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1501.3793.1 ID=prot_Ecto-sp13_S_contig1501.3793.1|Name=mRNA_Ecto-sp13_S_contig1501.3793.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=552bp
MKVSPDMRLSWLQRWQSMDEDGSNLLDYTEFLQACGLRDNMWSWRMFNLL
DKKFVEVAFRMCSRRGSTWDPDKSVLDEKDIRLFVEERIWRHLSSGFKEG
LTSARARWARSMSPAELSSSVKTASKRATKHLAESARDISQGGGAIRQLS
TRKMADTRDWLKVESEMLTEAAKGAARDVEKFARLKATVAVAIAVNRMRA
LAEAARQARQAKRKYEPDGETAPNTGKRVGEAAKVGGEETLAALRRSFVA
TTAARYFSEAGKDVAQGGLRRHDQQRPTSANLEGGDPDVADNGDGLLLGE
DEDSEDSQRARDDDESEVPATAEENPWDILTDAKAKAEVKVFQERHWAVT
EKFYENLVTATERLEEKRTREKGYDFSADFPKLWCAANMRGSQGEREIQY
RRKRRSSATKRAANVYLRFITLWQARHQVAGNDSGRSKLAKAFNRWRLNT
CDATVDDLSGSLSTLGRGGTAASEESSTHPPRHIPSLKEMWESAAAYEGE
GTHLHAIIMRKAQADRPLPRELCEAYEREMVERIDRRQAENNVPIVPMPI
C*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair