mRNA_Ecto-sp13_S_contig15008.3789.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15008.3789.1
Unique NamemRNA_Ecto-sp13_S_contig15008.3789.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15008.3789.1 vs. uniprot
Match: A0A6H5JH17_9PHAE (Clu domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JH17_9PHAE)

HSP 1 Score: 672 bits (1734), Expect = 1.660e-228
Identity = 333/338 (98.52%), Postives = 336/338 (99.41%), Query Frame = 1
Query:    1 EGGAAAAAGEVDPAAEAAAQRIQRALDIRGRLKDSRVPVVGAEGLGAFYGVGLGLAVEEVASPSPEEGGGKDKGGKDRDGPITCLKGVSVSAWNPPPPQRRLVGDLMYLEVVALDGTVINITCTQGGFYVNGTSRGNFDPRPISGNPCHSHELAVCLLARNPSFAKAWNNAVAQAWKRIQSDDPVHALARAMREGRGDTVMVKPQWNMPVPDPKWGEHKADPGRAQDDLSSGFGMEDRGVPREWNDEYQCLLELPSDTAELSMTRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSASQ 1014
            EGGAAAA GEVDPAAEAAAQRIQRALDIRGRLKDSRVPVVGAEGLGAFYGVGLGLAVEEVASPSPEEGGGKDKGGKDRDGPITCLKGVSVSAWNPPPPQRRLVGDLMYLEVVALDGTVINITCTQGGFYVNGTSRGNFDPRPISGNPCHSHELAVCLLARN SFAKAWNNAVAQAW+RIQSDDPVHALARAMREGRGDTVMVKPQWNMP+PDPKWGEHKADPGRAQDDLSSGFGMEDRGVPREWNDEYQCLLELPSDTAELS+TRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSASQ
Sbjct:  157 EGGAAAAVGEVDPAAEAAAQRIQRALDIRGRLKDSRVPVVGAEGLGAFYGVGLGLAVEEVASPSPEEGGGKDKGGKDRDGPITCLKGVSVSAWNPPPPQRRLVGDLMYLEVVALDGTVINITCTQGGFYVNGTSRGNFDPRPISGNPCHSHELAVCLLARNSSFAKAWNNAVAQAWERIQSDDPVHALARAMREGRGDTVMVKPQWNMPIPDPKWGEHKADPGRAQDDLSSGFGMEDRGVPREWNDEYQCLLELPSDTAELSLTRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSASQ 494          
BLAST of mRNA_Ecto-sp13_S_contig15008.3789.1 vs. uniprot
Match: A0A836CKQ1_9STRA (Clustered mitochondria-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKQ1_9STRA)

HSP 1 Score: 229 bits (583), Expect = 1.630e-63
Identity = 133/316 (42.09%), Postives = 179/316 (56.65%), Query Frame = 1
Query:   79 DIRGRLKDSRVPVVGAEGLGAFYGVGLGLAVEEVASPSPEEGGGKDKGGKDRDGPITCLKGVSVSAWNPPPPQRRLVGDLMYLEVVALDGTVINITCTQGGFYVNGTSRGNFDPRPISGNPCHSHELAVCLLARNPSFAKAWNNAVAQAWKR-IQSDDPVHALARAMREGRGDTVMVKPQWNMP-----VPDPKWGEHKADPGRAQDDLSSGFGMEDRGVPREWNDEYQCLLELPSDTAELSMTRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSA 1008
            D   RLKD+ +PV   +GL AFY V L   +  V      +G G   G +       CLK +   AWNPPP +RRL+GDL+YLEVV LD   +++T T  GFYVN T    FDP P +  P  SH+L  CL++ +PSF + W   +A+A +R +  +DP+  LA  +R+G+ D V   PQWN+P     + +P  G H AD  RA++D +S FGME+RG  R+WN+E Q                         DFQ+AAT GA AI  G++ P N  E+  SHV+VFNNIFFS A D+ +  +AV+GD  A KSA
Sbjct:  240 DALARLKDASIPVGRPQGLAAFYDVALATDISHVP-----KGAGLGAGSR-------CLKSLVFGAWNPPPARRRLLGDLVYLEVVTLDDATLHVTATPAGFYVNNTRHATFDPAPAA-VPHFSHDLLTCLISASPSFREHWTAVMARAAERAVLPEDPLQTLAVMVRDGKVDAVTTTPQWNVPNTTEGINNPL-GPHMADQSRAEEDATSTFGMEERGPLRDWNEELQS------------------------DFQEAATLGAQAICQGYVTPINGMESPRSHVYVFNNIFFSNALDTKEGGRAVNGDPMAHKSA 517          
BLAST of mRNA_Ecto-sp13_S_contig15008.3789.1 vs. uniprot
Match: A0A4D9CWV2_9STRA (Clu domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWV2_9STRA)

HSP 1 Score: 206 bits (525), Expect = 8.790e-56
Identity = 107/253 (42.29%), Postives = 148/253 (58.50%), Query Frame = 1
Query:  250 CLKGVSVSAWNPPPPQRRLVGDLMYLEVVALDGTVINITCTQGGFYVNGTSRGNFDPRPISGNPCHSHELAVCLLARNPSFAKAWNNAVAQAWKRIQSDDPVHALARAMREGRGDTVMVKPQWNMPVPDPKWGEHKADPGRAQDDLSSGFGMEDRGVPREWNDEYQCLLELPSDTAELSMTRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSA 1008
            CL  +  S WNPPP  RRL GDL+YLEV A+DG+V+++T    GFYVNGT    FDP P       +H+L   L A  P F  AW  AV  A    + D+P+ +LA         TV+ +              H  D GR+ +DL   FGM++RG  R+WN++YQ   E+P+ T    + R++ LH++L DF +AA AGA+A+  GF+ P NP EA  +HV+VFNNIFFSYA ++ + +K + GD  A K+A
Sbjct:  266 CLHNLGFSGWNPPPAHRRLQGDLLYLEVQAMDGSVLHLTAVPRGFYVNGTRGQVFDPSPDPAAAHFAHDLLPLLGAALPCFQDAWRQAVLAARDHSRPDEPMESLALG-------TVLAR--------------HHLDEGRSAEDLVQAFGMDERGALRDWNEDYQGAREMPAGTVGEKIVRAKVLHRVLADFGEAAVAGALAVVQGFVVPINPNEARRNHVYVFNNIFFSYALETQNTFKVIEGDGPAFKNA 497          
BLAST of mRNA_Ecto-sp13_S_contig15008.3789.1 vs. uniprot
Match: A0A7S2D7Q1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D7Q1_9STRA)

HSP 1 Score: 206 bits (525), Expect = 9.210e-56
Identity = 130/348 (37.36%), Postives = 182/348 (52.30%), Query Frame = 1
Query:  145 YGVGLG--LAVEEVASPSP-----EEGGGKDKGGKDRDGPITCLKGVSVSAWNPPPPQRRLVGDLMYLEVVALDGT----------VINITCTQGGFYVNGTSRGN-------FDPRP---ISGNPCHSHELAVCLLARNPSFAKAWNNAVAQAW-KRIQSDDPVHALARAMREGRGDTVMVKPQWNMPVPDPKWG------------------------------EHKADPGRAQDDLSSG--FGMEDRGVPREWNDEYQCLLELPSDTAELSMTRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSA 1008
            YG  L    A  E A+ SP     +E  G D    + +  + C++ +  S WNPPPP+RRL+GDL+Y+EV  LD             + +T T  G+YVN ++ GN       F P P     G P  S EL   L+  +P  AK W   + +A  K +  + P+  LA  + EGR D+V+++PQW +P   P+                                E   D  RA++DLS+   +GM++RG  R+WN+EYQC+ ELP+ T    + R++ ++K+  DFQ+AA  GA AIS G +PP NPTE    HV+VFNN+FFSY  DS DAYK + GD AA KSA
Sbjct:  378 YGASLNGSAASTETAATSPTSLPADEQLGSDGTSDEGETTVKCIRYMCSSGWNPPPPERRLLGDLLYMEVGLLDEECDEKGEMTHQTVQLTATSRGWYVNASTSGNRNGRAPQFRPEPKFTSDGRPVASPELLGVLIQASPVCAKRWKLLLERAKSKSLLHESPLEMLALMVTEGRMDSVIIRPQWCIPPTPPRLDYPPSSGKTEGEGMCAESSTTGSDSTEGRGVEWSMDLNRAEEDLSANLPWGMDERGALRDWNEEYQCVHELPTRTLSEKLNRAKMVYKVWLDFQEAAMNGAAAISAGHVPPINPTEPTRQHVYVFNNLFFSYGVDSKDAYKVLGGDGAAVKSA 725          
BLAST of mRNA_Ecto-sp13_S_contig15008.3789.1 vs. uniprot
Match: A0A7S2XXM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXM4_9STRA)

HSP 1 Score: 189 bits (479), Expect = 2.060e-52
Identity = 124/338 (36.69%), Postives = 159/338 (47.04%), Query Frame = 1
Query:  238 GPITCLKGVSVSAWNPPPPQRRLVGDLMYLEVVALDGTVINITCTQGGFYVNGTSRGN------FDPRPISGNPCHSHELAVCLLARNPSFAKAWNNAVAQAWKRIQSD-DPVHALARAMREGRGDTVMVKPQWN----------------------MPVPDPKWGE----------------------------------------------------HKADPGRAQDDLSSGFGMEDRGVPREWNDEYQCLLELPSDTAELSMTRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSA 1008
            G   CLKG+  S +NPPPP RRLVGD+ YLE   L    + ITC   GFYVN T++        FDPR  S  PC +  L   LL  +PSF   W  A AQA + I+ +   +  LA    EGRG+  + KPQWN                      +P+ DP  G                                                     H  D  R +D+L + FGM+DRG  R+WN+EYQ ++E+PS+T +  + R R + K+L DF +AA AGA  I  G I P NP E   +HV+V+NNIFFS A DS  AY  V GD+AA K A
Sbjct:    5 GGAPCLKGLCFSGFNPPPPARRLVGDIFYLEAHTLGEGRLYITCCPAGFYVNQTAQLTEGGEVVFDPRAAS-PPCLARTLLDTLLLASPSFRNQWTTARAQASQHIKDNMSALDILATMFAEGRGEAALTKPQWNAFVPTIKATNPGAAAGADTGGAVPLADPAPGRRRGRAFIKPAIGANLSAPSNSTPQQQQQAGQTSPALGGXXXXXXXXQSPVPHHAFDLNRMEDELLATFGMDDRGALRDWNEEYQSVMEMPSNTLQERILRCRGIFKVLTDFSEAAAAGAGGIFRGEISPINPMEPARAHVYVYNNIFFSRAVDSRGAYAVVGGDNAAYKFA 341          
BLAST of mRNA_Ecto-sp13_S_contig15008.3789.1 vs. uniprot
Match: A0A2P4X663_9STRA (Eukaryotic translation initiation factor 3 subunit (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X663_9STRA)

HSP 1 Score: 187 bits (474), Expect = 7.940e-51
Identity = 104/258 (40.31%), Postives = 156/258 (60.47%), Query Frame = 1
Query:  250 CLKGVSVSAWNPPPPQRRLVGDLMYLEV-VALDGTVINITCTQGGFYVNGTSRGNFDPRPISGNPCHSHELAVCLLARNPSFAKAWNNAVAQAWKRIQSDDP--VHALARAMREGRGDTVMVKPQWNMPVPDPKWGEHKADPGRAQDDLSSGFGMEDRGVPREWNDEYQCLLELPSDTAELSMTRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSASQ 1014
            C+K +  S +NPPP  R+LVGDL+YL+V VA D T  +IT    GF+VN ++   FDPRP    P HSH L   L   +P F +++   +++A   +  + P  +  +  A     G  +  K  WN P+     GEH  D  RA+D+L + +GM++RGV R+WN+EYQC  ELP+D+ +  + R+R ++K++ +F +AAT GAVAI +G IPP NP + + +HV+VFNNIFFS + D      A  G+  A  +A++
Sbjct:  255 CVKSIVFSGYNPPPGPRKLVGDLLYLDVIVAGDNTRYHITAHVNGFFVNRSTATKFDPRPHKTAPAHSHLLVDVLSTVSPKFRESYAALLSKAAS-LAKEGPSSIEWMVAA-----GSNLGGKLPWNTPIATAT-GEHTYDLNRAEDELCATYGMDERGVLRDWNEEYQCCRELPTDSLKDEVVRARVMYKIVTEFVEAATQGAVAIVEGNIPPINPMDDKSAHVYVFNNIFFSVSIDGKSTKDAAGGEENAYSAANR 505          
BLAST of mRNA_Ecto-sp13_S_contig15008.3789.1 vs. uniprot
Match: A0A662WVJ9_9STRA (Clu domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WVJ9_9STRA)

HSP 1 Score: 187 bits (476), Expect = 2.740e-49
Identity = 104/260 (40.00%), Postives = 155/260 (59.62%), Query Frame = 1
Query:  247 TCLKGVSVSAWNPPPPQRRLVGDLMYLEV-VALDGTVINITCTQGGFYVNGTSRGNFDPRPISGNPCHSHELAVCLLARNPSFAKAWNNAVAQAWKRI-QSDDPVHALARAMREGRGDTVMVKPQWNMPVPDPKWGEHKADPGRAQDDLSSGFGMEDRGVPREWNDEYQCLLELPSDTAELSMTRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPD--AYKAVSGDSAARKSASQ 1014
            +CLK +  S +NPPP  R+L GDL+YLEV +A D T  ++T    GF+VN ++   FDPRP +   CH+H L   L + +P F  ++   +++A     Q    +  +  A     G ++  K  WN P       EH  D  RA+D+L + +GM++RGV R+WN+EYQC  ELP  + +  + R+R ++K++ +F +AAT GAVAI +G IPP NP + E +HV+VFNNIFFS + D  D  A  A  G+ AA  +A++
Sbjct:  251 SCLKSIVFSGYNPPPGPRKLAGDLLYLEVTIAGDNTRYHVTAHVNGFFVNRSTASKFDPRPHNSAACHAHLLVDVLSSASPKFKASFATLLSKAAALAKQGPSSIEWMVAA-----GSSLGGKLPWNTPASTAA-DEHTYDLNRAEDELCASYGMDERGVLRDWNEEYQCCRELPVTSLKEELVRARVMYKIVTEFVEAATQGAVAIVEGHIPPINPMDDESAHVYVFNNIFFSLSIDGKDKAAKDAAGGEEAAYSAANR 504          
BLAST of mRNA_Ecto-sp13_S_contig15008.3789.1 vs. uniprot
Match: D0P366_PHYIT (Clustered mitochondria protein homolog n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0P366_PHYIT)

HSP 1 Score: 186 bits (472), Expect = 9.640e-49
Identity = 104/258 (40.31%), Postives = 154/258 (59.69%), Query Frame = 1
Query:  250 CLKGVSVSAWNPPPPQRRLVGDLMYLEVVAL-DGTVINITCTQGGFYVNGTSRGNFDPRPISGNPCHSHELAVCLLARNPSFAKAWNNAVAQAWKRIQSDDP--VHALARAMREGRGDTVMVKPQWNMPVPDPKWGEHKADPGRAQDDLSSGFGMEDRGVPREWNDEYQCLLELPSDTAELSMTRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSASQ 1014
            C++ +  S +NPPP  R+L GDL+YLEVVA  D +  +IT    GF+VN ++   FDPRP    P HSH L   L   +P F +++   +A+A   +  + P  +  +  A     G ++  K  WN PV      EH  D  RA+D+L + +GM++RGV R+WN+EYQC  ELP DT +  + R+R ++K++ +F +AAT GAVAI +G IPP NP + + +HV+VFNNIFFS + D      A  G+  A  +A++
Sbjct:  253 CVQSIVFSGYNPPPGPRKLAGDLLYLEVVAAGDNSRYHITSHVNGFFVNRSTATKFDPRPHKTVPAHSHLLVDVLSNVSPKFKESYGALLAKAAS-LAKEGPSSIEWMVAA-----GSSLGGKLPWNTPVA-AAMEEHSYDLNRAEDELCTTYGMDERGVLRDWNEEYQCCRELPKDTLKAEIVRARVMYKIVAEFVEAATKGAVAIVEGNIPPINPMDDKSAHVYVFNNIFFSVSIDGKSTKDAAGGEENAYSAANR 503          
BLAST of mRNA_Ecto-sp13_S_contig15008.3789.1 vs. uniprot
Match: A0A3M6VMY7_9STRA (Clustered mitochondria protein homolog n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VMY7_9STRA)

HSP 1 Score: 186 bits (472), Expect = 9.670e-49
Identity = 104/258 (40.31%), Postives = 154/258 (59.69%), Query Frame = 1
Query:  250 CLKGVSVSAWNPPPPQRRLVGDLMYLEVV-ALDGTVINITCTQGGFYVNGTSRGNFDPRPISGNPCHSHELAVCLLARNPSFAKAWNNAVAQAWKRIQSDDP--VHALARAMREGRGDTVMVKPQWNMPVPDPKWGEHKADPGRAQDDLSSGFGMEDRGVPREWNDEYQCLLELPSDTAELSMTRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSASQ 1014
            C++ +  S +NPPP  R+L GDL+YLEVV A D T  +IT    GFYVN ++   FDP+P   N  H+H L   L   +P F +++   +A+A   +  + P  +  +  A     G  +  K  WN   P     EHK D  RA+D+L + +GM++RGV R+WN+EYQC  ELP+DT +  + R+R ++K++ +F +AAT GAVAI +G IPP NP + + +HV+VFNNIFFS + D      A  G+  A  +A++
Sbjct:  257 CVESIVFSGYNPPPGPRKLAGDLLYLEVVVAGDNTRYHITAHVSGFYVNRSTATKFDPQPHKTNAAHAHLLVDLLSTVSPKFRESYAALLAKAAS-LAKEGPSSIEWMVAA-----GSNLGGKLPWN--TPSSAMVEHKYDLNRAEDELCASYGMDERGVLRDWNEEYQCCRELPTDTLKEEIVRARVMYKIVVEFVEAATQGAVAIVEGNIPPINPMDDQSAHVYVFNNIFFSMSIDGKSIKDAAGGEENAYSAANR 506          
BLAST of mRNA_Ecto-sp13_S_contig15008.3789.1 vs. uniprot
Match: A0A5D6XWK4_9STRA (Clu domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWK4_9STRA)

HSP 1 Score: 186 bits (471), Expect = 1.310e-48
Identity = 127/357 (35.57%), Postives = 177/357 (49.58%), Query Frame = 1
Query:   19 AAGEVDPAAEAAAQRIQRALDIRGRLKDSRVPVVGAEGLGAFYGVGLGLAVEEVA--------------------SPSPEEGGGKDKGGKDRDGPITCLKGVSVSAWNPPPPQRRLVGDLMYLEVVALDGTVINITCTQGGFYVNGTSRGNFDPRPISGNPCHSHELAVCLLARNPSFAKAWNNAVAQAWKRIQSDDPVHALARAMREGRGDTVMVKPQWNMPVPDPKW-----GEHKADPGRAQDDLSSGFGMEDRGVPREWNDEYQCLLELPSDTAELSMTRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSASQ 1014
            AAG   PA+E + +++Q   DI  +L+   VPV+    L  FY +    AV   A                    S  P+  G       D   P T +K +  S +NPPP  R+L GDL+YLEV   DG V ++T    GF+VN ++   FDP P       +H L   L A + +F  A+   +A+A +  +          A       TV  K  W  P P           H  D  RA+D+L++ FGM++RGV R+WN+EYQC  ELP  T +  + R+R L+K++ +F DAAT GAVAI +G IPP NP +   +HV+VFNNIFFS + D   A K    D A   SA++
Sbjct:  165 AAGGETPASEISEKQLQMLRDIHAKLEGVTVPVLPE--LADFYTLPGASAVVAAAXXXXXXXXXXXXXGSKGKKSSEKPQPAGAVGAAAVDLKLP-TVVKSIVFSGYNPPPGPRKLAGDLLYLEVAVADGAVFHVTAHVDGFFVNRSTAAAFDPLPRQPGAAPTHLLVDVLAAASDAFKSAYAALLAKAAQLAKQGPESLEWMLAAGSSSSATVGGKLPWLAPPPPTASTGAGAAAHTYDLNRAEDELTASFGMDERGVLRDWNEEYQCCRELPRATLKEQVVRARVLYKIVGEFVDAATQGAVAIVEGHIPPINPMDDASAHVYVFNNIFFSLSVDGRAAAKDTGSDEAPYASATR 518          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15008.3789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JH17_9PHAE1.660e-22898.52Clu domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CKQ1_9STRA1.630e-6342.09Clustered mitochondria-domain-containing protein n... [more]
A0A4D9CWV2_9STRA8.790e-5642.29Clu domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A7S2D7Q1_9STRA9.210e-5637.36Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2XXM4_9STRA2.060e-5236.69Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A2P4X663_9STRA7.940e-5140.31Eukaryotic translation initiation factor 3 subunit... [more]
A0A662WVJ9_9STRA2.740e-4940.00Clu domain-containing protein (Fragment) n=1 Tax=N... [more]
D0P366_PHYIT9.640e-4940.31Clustered mitochondria protein homolog n=1 Tax=Phy... [more]
A0A3M6VMY7_9STRA9.670e-4940.31Clustered mitochondria protein homolog n=2 Tax=Per... [more]
A0A5D6XWK4_9STRA1.310e-4835.57Clu domain-containing protein n=1 Tax=Pythium bras... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15008contigEcto-sp13_S_contig15008:9..4163 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score663.7
Seed ortholog evalue4.8e-188
Seed eggNOG ortholog2880.D7G8X4
Model size1059
KEGG koko:K03255
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.intracellular distribution of mitochondria
EggNOG OGsKOG1839@1,KOG1839@2759
Cds size1059
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03012
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15008.3789.1prot_Ecto-sp13_S_contig15008.3789.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15008 9..4163 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462799.7489505-CDS-Ecto-sp13_S_contig15008:8..1371681462799.7489505-CDS-Ecto-sp13_S_contig15008:8..137Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15008 9..137 +
1681462799.7635343-CDS-Ecto-sp13_S_contig15008:671..8721681462799.7635343-CDS-Ecto-sp13_S_contig15008:671..872Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15008 672..872 +
1681462799.7722647-CDS-Ecto-sp13_S_contig15008:1107..12751681462799.7722647-CDS-Ecto-sp13_S_contig15008:1107..1275Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15008 1108..1275 +
1681462799.7815363-CDS-Ecto-sp13_S_contig15008:1947..20831681462799.7815363-CDS-Ecto-sp13_S_contig15008:1947..2083Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15008 1948..2083 +
1681462799.7993567-CDS-Ecto-sp13_S_contig15008:2717..28661681462799.7993567-CDS-Ecto-sp13_S_contig15008:2717..2866Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15008 2718..2866 +
1681462799.8107567-CDS-Ecto-sp13_S_contig15008:3506..35901681462799.8107567-CDS-Ecto-sp13_S_contig15008:3506..3590Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15008 3507..3590 +
1681462799.8208482-CDS-Ecto-sp13_S_contig15008:3971..41631681462799.8208482-CDS-Ecto-sp13_S_contig15008:3971..4163Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15008 3972..4163 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15008.3789.1

>prot_Ecto-sp13_S_contig15008.3789.1 ID=prot_Ecto-sp13_S_contig15008.3789.1|Name=mRNA_Ecto-sp13_S_contig15008.3789.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=353bp
EGGAAAAAGEVDPAAEAAAQRIQRALDIRGRLKDSRVPVVGAEGLGAFYG
VGLGLAVEEVASPSPEEGGGKDKGGKDRDGPITCLKGVSVSAWNPPPPQR
RLVGDLMYLEVVALDGTVINITCTQGGFYVNGTSRGNFDPRPISGNPCHS
HELAVCLLARNPSFAKAWNNAVAQAWKRIQSDDPVHALARAMREGRGDTV
MVKPQWNMPVPDPKWGEHKADPGRAQDDLSSGFGMEDRGVPREWNDEYQC
LLELPSDTAELSMTRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEA
EHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSASQVCFLISIDRAFR
LN*
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mRNA from alignment at Ecto-sp13_S_contig15008:9..4163+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15008.3789.1 ID=mRNA_Ecto-sp13_S_contig15008.3789.1|Name=mRNA_Ecto-sp13_S_contig15008.3789.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4155bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15008:9..4163+ (Ectocarpus species13 EcNAP12_S_4_19m)
GAGGGAGGTGCCGCGGCAGCGGCGGGAGAGGTTGATCCGGCAGCCGAAGC CGCCGCGCAGCGCATCCAGAGGGCGCTGGACATCCGCGGGAGGCTGAAGG ACAGTCGGGTGCCGGTTGTTGGTGCAGAGGTGTGTACGGCTACGTTGCTG CTGTGTTTGTTGTGGTGGTTGTTGTTGTTGTGGTGGTGCGGTTCTTGCTG GGTCCGTTGTTGTTGCCGTGGGTGTTGTTGTGATCGTCGTAGTTGTCATG CTGTTGCTGTTGGGGCGGTGGGTGTTGTTGTTATCGTTGATGGTGTTCTT GTGGTGTTGACAGTTGTTCTTGGTGCTGTCGTCGATGCTGTTATTGTTGG TATTGTTGAGGTGGTGGCGGTGGTTGTTGCTGCTGTTGCCACTGTGCTGG GGGTGGTCGATGCTGTTGTTTGGTCTCATCGTATCTCCGTTGGTTGGAAG CATGTACATGTGGTGAGGACGATGCCTCCCCCTGGCCATGGACGGCAACA TGTCTGTCATGTCAAGTAATAAGTTGCTACGGTGCTGAATTGCGTCTGAG ATGGCTACCGGCTATCGTGCCCTCTCCTTATAGATGAAGGAGCACTCATC AAGATCTCTGACCTCCCTTCCCTCATATGGTGATACCCAAACACGCCTTG GTGGAAACCCCAGGGGCTTGGAGCGTTCTATGGTGTCGGTCTCGGTCTTG CCGTCGAGGAAGTAGCGTCTCCATCGCCGGAGGAGGGCGGCGGCAAAGAC AAGGGGGGCAAGGACAGGGACGGGCCAATCACGTGCCTCAAGGGGGTTTC GGTGTCTGCGTGGAACCCGCCCCCTCCCCAGCGGAGGCTGGTGGGCGACC TCATGTACCTGGAGGTGAGAAACAGGGAGAAAAAAGAGGTTTGTGAGAAG TGAGGATGCGTACGTGAAAAGAGTATACTTTGGAAGTATGAGCCGCCGAG TAAAAAAGAAAAAGCCACATCATCAACGGCGAGAAGCGGCAACGACTACA ACTACAACGAAAAAATCATCATCATCATCAGCAACATTAACACCAACGGT AACACAAGCAACCTTAAAACGCCACCTCTCCTTGCCAACATGAAAACAGG TGGTGGCGTTGGACGGTACTGTGATCAACATCACCTGCACGCAGGGGGGC TTCTACGTGAACGGCACCAGCCGGGGAAATTTCGACCCAAGACCCATCTC CGGGAACCCTTGCCATTCCCACGAGCTCGCCGTGTGCCTCCTCGCCAGAA ACCCCAGCTTCGCCAAGGTATGTATCATTCGTTGCTCTAGCCCTGAGTAC TGCTTCCTGCAATAGTTCCCACAGGTGCGGGTGGTTGTATTTGTGATTAG CACCGACCGCGCTAGTCGGCTGCCCCATGCACAGACCTCGTCTTACAAGA GCGGATGTATGTGTTTTGATTTGCATCCCCGGGCTCACCAACGCAAAAGA TGTCAATGTGTGCTTATGGCTTTCTTGAGTTGGCATCGACGCGCTGACCG GGTGACCAATGGAAAGACATCAATCTCGATGCGGCTGAAAACAGGAAAAT GCTCCTCAAGGCCATGACATGTATATATCATGGTGTGTGTGTTTCTTTTT GTTACGCTGACGGGACCGGCTGACCAATCAATAGGCGTTAGTCTTGTGTG TCTTGTGTGGGCAGAAGGGGAATGCCATTCTGTGATCGGCCGGTTGGGCT GCACAGGTGTTGCTGTCACTGGACAAGGCGTGTTTCTCATCCGGCATTGT TACCGCCACGGTTTTCGCGTTCCGCGTTCCGTTGCCCTTACCCCTGCACT GTCAAAAAACCGTTTCTGTTTCGTGTACCGTGTTCCCGTTACCGTCACCC CTGTACCGTTTCCGCATTCCGTTTCCTGCATTAATTCTCAACATGTCCCG ATTACCGTTGCCATTGATTGCCCTACCGTTGCCGCGAAGGCCTGGAATAA TGCCGTGGCCCAGGCGTGGAAGCGCATCCAGTCAGACGACCCCGTCCACG CCCTGGCGAGGGCCATGCGGGAGGGCAGAGGGGACACAGTGATGGTGAAG CCACAGTGGAACATGCCTGTCCCCGGTGAGAAGAACAACGAAGAACGCCT CCTCCTGCTCCTGGCGCTTTTTTCAACCTCCTTGTATGTTTTGTGACTTC GCTAGGATTTAAAATTTGCCAATCTTAGCAGTGTAGTTGTCAGGTTTTGG AATATACCAATCCTCGCAGAACTTTTGTTTCAAGCGTGATTTCATTGTTT TCCCCGTCGGTGCGTCAAGCTATAGCGGTGGGGCATACCGAAATATTTCC GTTAAATGGGGGCACGAGAAGGCACTTGACTTGCGGTATCGTGCTTTGCG GGACGGGGAGACCCCGAAACATGTACATGTAGCTTTCAACAGTTTCTGTG CAGAAAAGCCATCCGATGTCCGGCATTCCAATCGATAATTTAGCGCTTTT GTCGACAGCGAAGGATTGAAATTCACCGCTCATCAAGAACCTGACGCCCA TTCGCCACCGCCATCATATCTTGGTACTTGTCCCTGCTGGAATGGCTGCT GTCCATTCCGGATGTTTTCACCAAACATAAGCATTTAACCACTGTCCGCA CTGCTTCCCCGAAATATTTCTCAACAAACAACGGTTCTCACACACAACAA ATCTTGACCGAATGCATGCACGCGTGTTGCACGTGAATTCTATGCGTTTA TCCTTGAAGATCCCAAGTGGGGAGAGCACAAGGCCGACCCAGGCCGCGCC CAAGACGACCTATCTTCCGGGTTTGGTATGGAGGACAGAGGCGTTCCTAG GGAGTGGAACGACGAGTATCAGTGCCTGTTGGAGCTGCCCAGCGATACCG CCGAGCTGGTGAGAAGGAGGGGGTGAAACACCTGCGTGTGCGAGGTTGTA CGTCCGATTAGTGTGATGTTTTTGTTTCTCTTCGTTGCATCTAGACCTCG TGCGGTGTGTATACTTTGCATGGTTCGGGGCATAGACGGTTTCTTGGTCT CTTGTTGCTCGCAATCTTACTGGTTCATATGGTACGTGACCGATCAAGCA TTTTCGCCGGAAGGTTCGTCATGATTCCAGTGCCTTACGACAACGATTGC AGCATCACCAACATTCGGGTTGCTGGACCTGATCCACGAGGGGTCGCCTA CCAACCCGACCATACCGTGCACATCAGTGCGCCTGTGTTGCTTGTGGACG GTCTCTCAAGAGTCACCGTGTTGCTTTCATGCAAAGGACTGTGGTGGTGT CTCGCTCTTGGTCGCCACTCGTGAATGAAGACCGCCACGGTTGCAATACG TGTTCATGTTTAGTGCAGGTTTGGTGCACTAACCTCAACGAACAATGTGT CGTTCATGTAAGCACCTGGTAGGGTCTGTTATCAGTCACTTCATCGTTTC CCGTGGTGTTTGCTCTCTTCTTCTTAAACTTTCAACCCTGACGCTGTCGC TGTTGATCGTTTCCCTCGTCTTTTCGGGTGCTATCCATTGTGGTGCAGAG CATGACCCGGTCGAGGGCTCTGCACAAGCTGCTGTGCGATTTCCAGGACG CTGCCACGGCGGGGGCGGTTGCCATCAGCGATGTGAGAAGTGTGCACAGC AGTGCACAGGGGGTACATGCAGGAGTAGAAAGGACTGTTGCGCTTGTGAA GAAATGCAATGACAACACACATGGGGCGAATGTGCTGCTTGCTGCGGTAC GATCCAAACCACTCGTGTCCTGTGCTTAGGTGTTGTATGAAGATGTAGTA CAAAGCTGTTAAGTCTAGAACAGGCTCGACAACGCTGGCCCGAGCGAAGA AGAGCTCTTTGTCTTGAACGTGGCTTGAAATTGTCGTCTTTTTGTTGACG CCGCATGCAATATCTTTTTTCCCAGTTCAATGCAAAGACTCCATACGACG GGTAGTCTTCCTGTGATTTTGCATTATTTCCTAATAATTATGTTGTTGTC TTGGCGACGACAGGGCTTCATCCCCCCTGCAAACCCTACCGAGGCGGAGC ACAGCCACGTCTTCGTCTTCAACAACATCTTCTTCAGCTACGCCGCGGAT AGCCCGGACGCCTACAAGGCTGTGTCGGGAGACTCGGCCGCTCGCAAGTC TGCCTCGCAGGTTTGTTTTTTAATAAGCATCGACCGTGCTTTCCGGCTGA ACTAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15008:9..4163+

>mRNA_Ecto-sp13_S_contig15008.3789.1 ID=mRNA_Ecto-sp13_S_contig15008.3789.1|Name=mRNA_Ecto-sp13_S_contig15008.3789.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1059bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15008:9..4163+ (Ectocarpus species13 EcNAP12_S_4_19m)
GAGGGAGGTGCCGCGGCAGCGGCGGGAGAGGTTGATCCGGCAGCCGAAGC
CGCCGCGCAGCGCATCCAGAGGGCGCTGGACATCCGCGGGAGGCTGAAGG
ACAGTCGGGTGCCGGTTGTTGGTGCAGAGGGGCTTGGAGCGTTCTATGGT
GTCGGTCTCGGTCTTGCCGTCGAGGAAGTAGCGTCTCCATCGCCGGAGGA
GGGCGGCGGCAAAGACAAGGGGGGCAAGGACAGGGACGGGCCAATCACGT
GCCTCAAGGGGGTTTCGGTGTCTGCGTGGAACCCGCCCCCTCCCCAGCGG
AGGCTGGTGGGCGACCTCATGTACCTGGAGGTGGTGGCGTTGGACGGTAC
TGTGATCAACATCACCTGCACGCAGGGGGGCTTCTACGTGAACGGCACCA
GCCGGGGAAATTTCGACCCAAGACCCATCTCCGGGAACCCTTGCCATTCC
CACGAGCTCGCCGTGTGCCTCCTCGCCAGAAACCCCAGCTTCGCCAAGGC
CTGGAATAATGCCGTGGCCCAGGCGTGGAAGCGCATCCAGTCAGACGACC
CCGTCCACGCCCTGGCGAGGGCCATGCGGGAGGGCAGAGGGGACACAGTG
ATGGTGAAGCCACAGTGGAACATGCCTGTCCCCGATCCCAAGTGGGGAGA
GCACAAGGCCGACCCAGGCCGCGCCCAAGACGACCTATCTTCCGGGTTTG
GTATGGAGGACAGAGGCGTTCCTAGGGAGTGGAACGACGAGTATCAGTGC
CTGTTGGAGCTGCCCAGCGATACCGCCGAGCTGAGCATGACCCGGTCGAG
GGCTCTGCACAAGCTGCTGTGCGATTTCCAGGACGCTGCCACGGCGGGGG
CGGTTGCCATCAGCGATGGCTTCATCCCCCCTGCAAACCCTACCGAGGCG
GAGCACAGCCACGTCTTCGTCTTCAACAACATCTTCTTCAGCTACGCCGC
GGATAGCCCGGACGCCTACAAGGCTGTGTCGGGAGACTCGGCCGCTCGCA
AGTCTGCCTCGCAGGTTTGTTTTTTAATAAGCATCGACCGTGCTTTCCGG
CTGAACTAA
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