mRNA_Ecto-sp13_S_contig15.3786.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15.3786.1 vs. uniprot
Match: A0A6H5LJ12_9PHAE (BRCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJ12_9PHAE) HSP 1 Score: 1240 bits (3208), Expect = 0.000e+0 Identity = 1098/1596 (68.80%), Postives = 1124/1596 (70.43%), Query Frame = 2
Query: 326 DLRSTNGTYIIDTGTGDKTRLAPKKATMLPEEGCRVQFGGAACKVAMGPLPEPGALSEEEKNGVYDNDTQIPGVIDLGDDEEGEXXXXXXXXXXEDAAAGSKKSDTEPLPGAEEEGKSEAEAGIPLAGTDASEPGRGAGDDRGRQDQGVEETKGEGCASDGGAKPRSPSRVRFEEEPASXXXXXXXXXXXXXXXXAEQPTQAMALELLDDSSDNGKEREGDDAKAATEQGSGSSAAMALELXXXXXXXXXXXXXAEAGEINQGDGDAAVPADPRGATEETAASAAPPGDXXXADAEVAPTDPPAHADSDGDTADEGDAALLFEKLDEDGNGKAKARXXXXXXXXAPAGEENSGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDAAGGAGAGLPSAAPRSPGPSAMAGLSGTPMTPSTLPDITGRSVTSPGNVSDVSTQRQESPRAPLRVAEEHRQXXXXXXXXXXXXXXXXDSPGGARETGWVDADIGNDARPAKREXXXXXXXXXX---------GSEVSGALLPAEDDLDDFEDDLLDAGAAEPAETGGNXXXXXXXXXXXXXXXXXXXXXXXXXETDATEVDTDEGPLAAGQTENIRDPPAVEENASAGGGTGSSSYMGAPQEPAEGTTVSSGRASPGASSGSDANAGGVDASEEEHQGRPGQQPPAQEDARSPGGSLLRRVSTEDSMMAIAREHARSEARAAAMNQESXXXXXXXHDQVRGARAGA---------------------------------------AGEGVPAVEA---------------------------------ALPEEEEEEVGVEPPMEAGDAGEEVVEEXXXXXXXXXQAGNDGHXXDQQREHEGPRGSKEEERSRDNVGAEEEGEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGTPGSASATAAPALTRTSGRRKQARKGDSTVDAPEGSTSKGLEEQAVNNTAPRAVGRRAGTRRAAASASHPEDLPEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDAEPQEELASAVAAGKKTRGRWRAAKESEPSHEDTAATPKATTATARGGSQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-GARKRKTEEAGVPSYPQADGTDEDNVASAPAXXXXXXXXXXXXXXXXXXAKKGTDSMPAAVAPATPSKRGRCRPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSQSSVDVKVVCFTGVKPTPKERSCMKKLGVSEVESVLEATHLVAGGSGVSLKRTPKLLAGLGRCRFVVDVEWLYQSAKDGKLLDGVEYVLSDAEAEKKWGFNMRVSLGRRPEAGLLSGLFVHVDPCVAGVKGMGCPPLEEMEMVVISAGGQWLPQLPKRGGPEPESLLVISHPDTLKAAGAKGAKSRAAAAAGRNGKAYLPEMLFLCILRQKMSWPADLVAGGGSAEAGPASKKPAKRRRV 4867
DLRS NGTYIIDT TGDKTRLAPKKATMLPEEGCR+ FGGAACKVAMGPLPEPGAL+EEEK+GVYDNDTQIPGVIDLGDDEE E EDAAA KKSDTEPL GAE EAGIPLAGTDASEPGRGAG DR RQDQGVEETKGEGCASDGGAKPRSPSRVRFEE PA+ AEQPTQAMALELLDDS DN XXXXXXXXXX AE +Q DGDAAVPADPRGATEETAASAAPPGD ADAEV PTDPPAHAD+DGDTADEGDAALLFEK DE+G+G KAR PAGEENSGDXXXXXXXXXXXX GSD A LP+AAPRSPGPSA AGLSGTPMTPSTLPDITGRSVTSPGNVSDVSTQRQESPRAPLR E XXXXXXXXXXXXXXXX XXXXXXXXXX GSEVSGALLPAEDDLD FEDDLLDAGAAEPAETGG+XXXXXXXXXXXXXXXXXXXXXXXXX TDATEVDTDEGPLAAG+TEN+ DPPAVEENASAGGGT SSS MGAP EPAEGTTVSSG ASPGASSGSDANAGGVDAS+ E QGR GQQPPAQEDARSPGGSLLRRVSTEDSMMAIAREHARSEA AAAMNQE XXXXXXX AG+G VE ALPEEEEEEVGVEPP+EAGDAG++VVE+ QAG+D XX SKEEERS + +GAEEEGEGG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TRTSGRRK+ K STVDAPEGSTSKGL+EQA NNT PRAVG RAGTRRAAASASHPE LPE XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX DDAEPQEE ASAV AGK+ RGR RAAKES TARG SQA XXXXXXXXXXXXXXXXX XX + GARKRK EEAGVPS PQADGTDED XXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDS+SS DVKV CFTGVKPTPKERSCMKKLGVSEVESVLEATHLVAGGSGVSLKRTPKLLAGLGRCRFVVDVEWLYQSAKDGKLLDGVEYVL DAEAEKKWGFNMRVSLGRRPEAGLLSGL VHVDPCVAGVKGMGCPPLEEMEMVVISAGGQWLPQLPKRGGPEPESLLVISHPD LKAAGAKGAKSRAAAAAGRNGKAYLPEMLFLCILRQKMSWPADLVAGGG AEAGPASKKPAKRRRV
Sbjct: 2 DLRSPNGTYIIDTETGDKTRLAPKKATMLPEEGCRIHFGGAACKVAMGPLPEPGALAEEEKDGVYDNDTQIPGVIDLGDDEEEEGKAEAGAGAEEDAAADGKKSDTEPLSGAEXXXXXXXEAGIPLAGTDASEPGRGAGVDRSRQDQGVEETKGEGCASDGGAKPRSPSRVRFEEAPANLSGGGGAVSGGTGDDDAEQPTQAMALELLDDSGDNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANAEEAGNSQDDGDAAVPADPRGATEETAASAAPPGDGGGADAEVVPTDPPAHADTDGDTADEGDAALLFEKSDEEGDGNVKARAAGAAAAAGPAGEENSGDXXXXXXXXXXXXDDDADGAMAKAVTDAGGGGSDXXXXXXACLPAAAPRSPGPSATAGLSGTPMTPSTLPDITGRSVTSPGNVSDVSTQRQESPRAPLRGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEVSGALLPAEDDLDGFEDDLLDAGAAEPAETGGDXXXXXXXXXXXXXXXXXXXXXXXXXXTDATEVDTDEGPLAAGRTENVPDPPAVEENASAGGGTRSSSAMGAPPEPAEGTTVSSGGASPGASSGSDANAGGVDASKGERQGRRGQQPPAQEDARSPGGSLLRRVSTEDSMMAIAREHARSEALAAAMNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDGTEVVEEGDSPPQQDEFLTPDTSALSPSKAQADGNEPRGKALPEEEEEEVGVEPPIEAGDAGKKVVEDPAGGEEEGDQAGSDXXXXXXXXXXXXXXXSKEEERSLEKMGAEEEGEGGREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XTRTSGRRKRTLKDVSTVDAPEGSTSKGLKEQATNNTTPRAVGGRAGTRRAAASASHPEVLPE-GEQEPAPPAPAGRRGRGGKKSPGGVASEPXXXXXXXXXXXXXXXXXXXXXXXXEEAEEVSLSETEGTARGDGKGGTAASAPAXXXXXXXXXXXXXXXXXSTSLGDDKGDDAEPQEEPASAVTAGKRARGRGRAAKESXXXXXXXXXXXXXXXXTARGCSQARGKXXXXXXXXXXXXXXXXXAEDAELSAEESDGAWAQSRQGKAGGKXXNSTGARKRKAEEAGVPSSPQADGTDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSESSCDVKV-CFTGVKPTPKERSCMKKLGVSEVESVLEATHLVAGGSGVSLKRTPKLLAGLGRCRFVVDVEWLYQSAKDGKLLDGVEYVLCDAEAEKKWGFNMRVSLGRRPEAGLLSGLSVHVDPCVAGVKGMGCPPLEEMEMVVISAGGQWLPQLPKRGGPEPESLLVISHPDALKAAGAKGAKSRAAAAAGRNGKAYLPEMLFLCILRQKMSWPADLVAGGGGAEAGPASKKPAKRRRV 1587
BLAST of mRNA_Ecto-sp13_S_contig15.3786.1 vs. uniprot
Match: D7G2Z1_ECTSI (Chain A, Crystal Structure Of The Brct Repeat Region From The Mediator Of Dna Damage Checkpoint Protein 1, Mdc1 pdb|2ADO|B Chain B, Crystal Structure Of The Brct Repeat Region From The Mediator Of Dna n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z1_ECTSI) HSP 1 Score: 1144 bits (2959), Expect = 0.000e+0 Identity = 1155/1725 (66.96%), Postives = 1183/1725 (68.58%), Query Frame = 2
Query: 71 MTQHMGMMDFSDEEEMDEDSNPVVGYLQVLPPNARMLREIKDGETTVGRNEDQDITVADPSVSGAHAVIEVLEVPGGGGKRLTLKDLRSTNGTYIIDTGTGDKTRLAPKKATMLPEEGCRVQFGGAACKVAMGPLPEPGALSEEEKNGVYDNDTQIPGVIDLGDDEEGEXXXXXXXXXXEDAAAGSKKSDTEPLPGAEEEGKSEAEAGIPLAGTDASEPGRGAGDDRGRQDQGVEETKGEGCASDGGAKPRSPSRVRFEEEPASXXXXXXXXXXXXXXXXAEQPTQAMALELLD--------------------------------DSSDNGKEREGDDAKAATEQGSGSSAAMALELXXXXXXXXXXXXXAEAGEINQGDGDAAVPADPRGATEETAASAAPPGDXXXADAEVAPTDPPAHADSDGDTADEGDAALLFEKLDEDGNGKAKARXXXXXXXXAPAGEENSGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDAAGGAG-------AGLPSAAPRSPGPSAMAGLSGTPMTPSTLPDITGRSVTSPGNVSDVSTQRQESPRAPLRVAEEHRQXXXXXXXXXXXXXXXXDSPGGARETGWVDADIGNDARPAKREXXXXXXXXXXGSEVSGALLPAEDDLDDFEDDLLDAGAAEPAETGGNXXXXXXXXXXXXXXXXXXXXXXXXXETDATEVDTDEGPLAAGQTENIRDPPAVEENASAGGGTGSSSYMGAPQEPAEGTTVSSGRASPGASSGSDANAGGVDASEEEHQGRPGQQPPAQEDARSPGGSLLRRVSTEDSMMAIAREHARSEARAAAMNQESXXXXXXXH-----------------------------------------------------------------------------------DQVRGARAGAAGEGVPAVEAALPEEEEEEVGVEPPMEAGDAGEEVVEEXXXXXXXXXQAGNDGHXXDQQREHEGPRGSKEEE-RSRDNVGAEEEGEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGTPGSASATAAPALTRTSGRRKQARKGDSTVDAPEGSTSKGLEEQAVNNTAPRAVGRRAGTRRAAASASHPEDLP-EEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDAEPQEELASAVAAGKKTRGRWRAAKESEPSHEDTAATPKATTATARGGSQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGARKR--KTEEAGVPSYPQADGTDEDNVASAPAXXXXXXXXXXXXXXXXXXAKKGTDSMPAAVAPATPSKRGRCRPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSQSSVDVKVVCFTGVKPTPKERSCMKKLGVSEVESVLEATHLVAGGSGVSLKRTPKLLAGLGRCRFVVDVEWLYQSAKDGKLLDGVEYVLSDAEAEKKWGFNMRVSLGRRPEAGLLSGLFVHVDPCVAGVKGMGCPPLEEMEMVVISAGGQWLPQLPKRGGPEPESLLVISHPDTLKAAGAKGAKSRAAAAAGRNGKAYLPEMLFLCILRQKMSWPADLVAGGGSAEAGPASKKPAKRRRV 4867
MTQHMGMMDFSDEEEMDEDS+PVVGYLQVLPPNARML+EIKDGETTVGRNEDQDITVADPSVSGAHAVIEVLEVPGGGGKRLT+KDLRSTNGTYIIDT TGDK RLAPKKATMLPEEGCR+QFGGAACKVAMGPLPEPGALSEEEK+GVYDNDTQI GVIDLG+DEE E EDAAAG KKSDTEPLPGAEEEGKSEAEAG PLAGTDASEPGRGAG DR RQDQGVEETKGEGC SDGGAK XXXXXXXXXXXXXXXX D+S+ G+ EG +A+AA XXXXXXXXXXXXX XXXXXXXX XXXXXXXXXXXXXXXXXXX +DA G AGLP+AAPRSPGPSA AGLSGTPMTPSTLPDITGRSVTSPGNVSDVSTQRQESPRAP R EE XXXXXXXXXXXXXXXXDSPGGA DLD FEDDLLDAGAAEPAETGG+XXXXXXXXXXXXXXXXXXXXXXXX ETDATEVDTDEGPLAAGQTEN+ DPPAVEENA A GGTGSSS +GAP EPAEGTTVSSGRASPGASSGSDAN GGVDASEEE QGRPGQ PPAQEDARSPGGSLLRRVSTEDSMMAIAREHARSEARAAAMN ESXXXXXXX ++ RGAR GAAGEG AVE ALPE+ XXXXXXXXX XX R+R+NV AEE+GE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S RRKQA K DST+DAPEGSTSKGL+EQA NNT PRAVGRRAGTRRAAASASHPEDLP EE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX X ASAVAAGK+TRG RAAKESEPS EDT ATPKAT TARG SQA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K EEAGVPS PQADGTDED+VA XXXXXXXXXXXXXXXXXX GTDS PAAVAP TPSK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSQSS DVKV CFTGVKPTPKERSCMKKLGVSEVESVLEATHLVAGGSGV+LKRTPKLLAGLGRCRFVVDVEWLYQSAKDGKLLDGVEYVL DAEAEKKWGFNMRVSLGRRPEAGLL+GL VHVDPCVAGVKGMGCPPLEEMEMVVISAGGQWLPQLPKRGGPEPESLLVISHPD LKAAGAKG KSRAAAAAGRNGKAYLPEM FLCILRQKMSWPADLVAGGG AEAGPASKKPAKRRRV
Sbjct: 1 MTQHMGMMDFSDEEEMDEDSSPVVGYLQVLPPNARMLKEIKDGETTVGRNEDQDITVADPSVSGAHAVIEVLEVPGGGGKRLTVKDLRSTNGTYIIDTETGDKKRLAPKKATMLPEEGCRIQFGGAACKVAMGPLPEPGALSEEEKDGVYDNDTQIAGVIDLGNDEEAEGKAAAGAGAREDAAAGGKKSDTEPLPGAEEEGKSEAEAGTPLAGTDASEPGRGAGGDRSRQDQGVEETKGEGCGSDGGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNSEGGEGEEGANAEAAGNNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDADGAMAKAVTDAGGXXXXXXXXXXAGLPAAAPRSPGPSATAGLSGTPMTPSTLPDITGRSVTSPGNVSDVSTQRQESPRAPFRGGEEXXXXXXXXXXXXXXXXXXXDSPGGAH------------------------------------------DLDGFEDDLLDAGAAEPAETGGDXXXXXXXXXXXXXXXXXXXXXXXX-ETDATEVDTDEGPLAAGQTENVPDPPAVEENAPAAGGTGSSSSVGAPPEPAEGTTVSSGRASPGASSGSDANVGGVDASEEERQGRPGQHPPAQEDARSPGGSLLRRVSTEDSMMAIAREHARSEARAAAMNLESXXXXXXXXXXXXXXXXXXGETEVDNGTGEAATQAIPVQLEEXXXXXXXXXXXXXXXXXTEVVEEGDSPPQQDDFFTPDTSALSPSKAQADGNKPRGARGGAAGEGAAAVEVALPEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNRENVVAEEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------XXXXSRRRKQALKDDSTLDAPEGSTSKGLKEQAANNTTPRAVGRRAGTRRAAASASHPEDLPGEEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAPLSGTEETARGRGKGETAASTSIPPAAKRGRRSSRAAPAPAASASLGGDEXXXXXXXXXPASAVAAGKRTRGWGRAAKESEPSEEDTTATPKATRGTARGASQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAEEAGVPSSPQADGTDEDDVAXX--XXXXXXXXXXXXXXXXXXXXXGTDSEPAAVAPVTPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSQSSGDVKV-CFTGVKPTPKERSCMKKLGVSEVESVLEATHLVAGGSGVALKRTPKLLAGLGRCRFVVDVEWLYQSAKDGKLLDGVEYVLCDAEAEKKWGFNMRVSLGRRPEAGLLAGLSVHVDPCVAGVKGMGCPPLEEMEMVVISAGGQWLPQLPKRGGPEPESLLVISHPDALKAAGAKGTKSRAAAAAGRNGKAYLPEMFFLCILRQKMSWPADLVAGGGGAEAGPASKKPAKRRRV 1629
BLAST of mRNA_Ecto-sp13_S_contig15.3786.1 vs. uniprot
Match: A0A835YMU5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMU5_9STRA) HSP 1 Score: 167 bits (423), Expect = 1.150e-37 Identity = 97/215 (45.12%), Postives = 125/215 (58.14%), Query Frame = 2
Query: 4172 VCFTGVKPTPKERSCMKKLGVSEVESVLEATHLVAGGSGVSLKRTPKLLAGLGRCRFVVDVEWLYQSAKDGKLLDGVEYVLSDAEAEKKWGFNMRVSLGRRPE-----AGLLSGLFVHVDPCVAGVKGMGCPPLEEMEMVVISAGGQWLPQLPKRGGPEPESLLVISHPDTLKAAGAKGAKSRAAAAAGRNGKAYLPEMLFLCILRQKMSWPADL 4801
VCFTG+ P E + KK GV+ V+SV EATHL+A V LKRT KLLAGL C VV EWL S K Y + DA+AE+KW FN+ +L R G+LSG VH P + G G+ CPP E++ +V SAG +W P L +GG + ++L+V++HPD A K+R A AGR GKAYLPE+L L Q+ +W DL
Sbjct: 1537 VCFTGIVPGAAELAAAKKAGVAIVDSVTEATHLIAS---VPLKRTAKLLAGLCACAHVVTPEWLLASGKRKAPAPEAAYTVKDADAEEKWKFNLAEALARAATLRAAGGGVLSGYRVHALPAMLGRSGLRCPPAAELKQIVESAGAEWAPSLRGKGG-DADTLIVLAHPDVCTTA-----KARKEAGAGRGGKAYLPELLTRACLLQECAWWPDL 1742
BLAST of mRNA_Ecto-sp13_S_contig15.3786.1 vs. uniprot
Match: A0A7S2LQ78_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LQ78_9STRA) HSP 1 Score: 100 bits (250), Expect = 7.860e-18 Identity = 63/172 (36.63%), Postives = 100/172 (58.14%), Query Frame = 2
Query: 4172 VCFTGVKPTPKERSCMKKLGVSEVESV---LEATHLVAGGSGVSLKRTPKLLAGLGRCRFVVDVEWLYQSAKDGKLLDGVEYVL-SDAEAEKKWGFNMRVSLGRRPEAGLLSGLF--VHVDPCVAGVKGMGCPPLEEMEMVVISAGGQWLPQLPKRGGPEPESLLVISHPDT 4669
V FTGV+ + K + ++ +G S +ES+ ATH++AG + SL+RTPKL+ L ++ + WL +S K G++L +Y+L D AEKK+ F+M+ ++ EA G+F ++V C GV G P ++E+E++V SAGG +L LPK L++ S P T
Sbjct: 341 VLFTGVEVSDKHKKMVRSIGASLIESIDDAASATHVIAGDTKNSLRRTPKLMVALCVTPNILHLNWLNESFKAGEVLKCNKYLLLKDKAAEKKYNFSMKTTIKNGSEAREKGGIFADMYVYFC-KGVAGNKAPSIKELEIMVSSAGGTFLKVLPKNNVDTKMILIITSDPAT 511
BLAST of mRNA_Ecto-sp13_S_contig15.3786.1 vs. uniprot
Match: A0A7F8RUS3_LEPWE (mediator of DNA damage checkpoint protein 1-like n=1 Tax=Leptonychotes weddellii TaxID=9713 RepID=A0A7F8RUS3_LEPWE) HSP 1 Score: 92.8 bits (229), Expect = 6.380e-17 Identity = 64/163 (39.26%), Postives = 90/163 (55.21%), Query Frame = 2
Query: 4145 SQSSVDVKVVCFTGVKPTPKERSCMKKLGVSEVESVLEATHLVAGGSGVSLKRTPKLLAGLGRCRFVVDVEWLYQSAKDGKLLDGVEYVLSDAEAEKKWGFNMRVSLGRRPEAGLLSGLFVHVDPCVAGVKGMGCPPLEEMEMVVISAGGQWLPQLPKRGGPE 4633
+Q S KV+ FTGV ER+ + LG S SV EA+HLV ++RT K L LGR ++ ++WL+QS K G L EYV++D E EK +GF++R +L R E LL G +HV P GV+ PP +M ++ GG LP +P+ P+
Sbjct: 43 NQESTAPKVL-FTGVVDARGERAVLA-LGGSLASSVAEASHLVTD----RVRRTVKFLCALGRGIPILSLDWLHQSRKAGCFLPPDEYVVTDPEQEKNFGFSLRDALSRARERRLLEGYEIHVTP---GVQ----PPPPQMGEIISCCGGTVLPSMPRSYKPQ 192
BLAST of mRNA_Ecto-sp13_S_contig15.3786.1 vs. uniprot
Match: A0A2F0B331_ESCRO (Mediator of DNA damage checkpoint protein 1 (Fragment) n=1 Tax=Eschrichtius robustus TaxID=9764 RepID=A0A2F0B331_ESCRO) HSP 1 Score: 94.7 bits (234), Expect = 1.290e-15 Identity = 64/162 (39.51%), Postives = 89/162 (54.94%), Query Frame = 2
Query: 4148 QSSVDVKVVCFTGVKPTPKERSCMKKLGVSEVESVLEATHLVAGGSGVSLKRTPKLLAGLGRCRFVVDVEWLYQSAKDGKLLDGVEYVLSDAEAEKKWGFNMRVSLGRRPEAGLLSGLFVHVDPCVAGVKGMGCPPLEEMEMVVISAGGQWLPQLPKRGGPE 4633
Q S KV+ FTGV ER+ + LG S SV EA+HLV ++RT K L LGR ++ ++WL+QS K G L EYV++D E EK +GF++R +L R E LL G +HV P GV+ PP +M ++ GG LP +P+ P+
Sbjct: 767 QESTAPKVL-FTGVVDAHGERAVLA-LGGSMASSVAEASHLVTD----RIRRTVKFLCALGRGIPILSLDWLHQSRKAGCFLPPAEYVVTDPEQEKNFGFSLREALSRARERRLLEGYEIHVTP---GVQ----PPPPQMGEIISCCGGTVLPSMPRSYKPQ 915
BLAST of mRNA_Ecto-sp13_S_contig15.3786.1 vs. uniprot
Match: A0A384B2W9_BALAS (Mediator of DNA damage checkpoint protein 1 n=3 Tax=Cetacea TaxID=9721 RepID=A0A384B2W9_BALAS) HSP 1 Score: 94.7 bits (234), Expect = 1.700e-15 Identity = 64/162 (39.51%), Postives = 89/162 (54.94%), Query Frame = 2
Query: 4148 QSSVDVKVVCFTGVKPTPKERSCMKKLGVSEVESVLEATHLVAGGSGVSLKRTPKLLAGLGRCRFVVDVEWLYQSAKDGKLLDGVEYVLSDAEAEKKWGFNMRVSLGRRPEAGLLSGLFVHVDPCVAGVKGMGCPPLEEMEMVVISAGGQWLPQLPKRGGPE 4633
Q S KV+ FTGV ER+ + LG S SV EA+HLV ++RT K L LGR ++ ++WL+QS K G L EYV++D E EK +GF++R +L R E LL G +HV P GV+ PP +M ++ GG LP +P+ P+
Sbjct: 1506 QESTAPKVL-FTGVVDAHGERAVLA-LGGSMASSVAEASHLVTD----RIRRTVKFLCALGRGIPILSLDWLHQSRKAGCFLPPAEYVVTDPEQEKNFGFSLREALSRARERRLLEGYEIHVTP---GVQ----PPPPQMGEIISCCGGTVLPSMPRSYKPQ 1654
BLAST of mRNA_Ecto-sp13_S_contig15.3786.1 vs. uniprot
Match: A0A8B8YUL2_BALMU (Mediator of DNA damage checkpoint protein 1 n=3 Tax=Cetacea TaxID=9721 RepID=A0A8B8YUL2_BALMU) HSP 1 Score: 94.7 bits (234), Expect = 1.750e-15 Identity = 64/162 (39.51%), Postives = 89/162 (54.94%), Query Frame = 2
Query: 4148 QSSVDVKVVCFTGVKPTPKERSCMKKLGVSEVESVLEATHLVAGGSGVSLKRTPKLLAGLGRCRFVVDVEWLYQSAKDGKLLDGVEYVLSDAEAEKKWGFNMRVSLGRRPEAGLLSGLFVHVDPCVAGVKGMGCPPLEEMEMVVISAGGQWLPQLPKRGGPE 4633
Q S KV+ FTGV ER+ + LG S SV EA+HLV ++RT K L LGR ++ ++WL+QS K G L EYV++D E EK +GF++R +L R E LL G +HV P GV+ PP +M ++ GG LP +P+ P+
Sbjct: 1666 QESTAPKVL-FTGVVDAHGERAVLA-LGGSMASSVAEASHLVTD----RIRRTVKFLCALGRGIPILSLDWLHQSRKAGCFLPPAEYVVTDPEQEKNFGFSLREALSRARERRLLEGYEIHVTP---GVQ----PPPPQMGEIISCCGGTVLPSMPRSYKPQ 1814
BLAST of mRNA_Ecto-sp13_S_contig15.3786.1 vs. uniprot
Match: A0A384B3E1_BALAS (Mediator of DNA damage checkpoint protein 1 n=7 Tax=Balaenoptera TaxID=9766 RepID=A0A384B3E1_BALAS) HSP 1 Score: 94.7 bits (234), Expect = 1.750e-15 Identity = 64/162 (39.51%), Postives = 89/162 (54.94%), Query Frame = 2
Query: 4148 QSSVDVKVVCFTGVKPTPKERSCMKKLGVSEVESVLEATHLVAGGSGVSLKRTPKLLAGLGRCRFVVDVEWLYQSAKDGKLLDGVEYVLSDAEAEKKWGFNMRVSLGRRPEAGLLSGLFVHVDPCVAGVKGMGCPPLEEMEMVVISAGGQWLPQLPKRGGPE 4633
Q S KV+ FTGV ER+ + LG S SV EA+HLV ++RT K L LGR ++ ++WL+QS K G L EYV++D E EK +GF++R +L R E LL G +HV P GV+ PP +M ++ GG LP +P+ P+
Sbjct: 1678 QESTAPKVL-FTGVVDAHGERAVLA-LGGSMASSVAEASHLVTD----RIRRTVKFLCALGRGIPILSLDWLHQSRKAGCFLPPAEYVVTDPEQEKNFGFSLREALSRARERRLLEGYEIHVTP---GVQ----PPPPQMGEIISCCGGTVLPSMPRSYKPQ 1826
BLAST of mRNA_Ecto-sp13_S_contig15.3786.1 vs. uniprot
Match: A0A384B360_BALAS (Mediator of DNA damage checkpoint protein 1 n=2 Tax=Balaenoptera acutorostrata scammoni TaxID=310752 RepID=A0A384B360_BALAS) HSP 1 Score: 94.7 bits (234), Expect = 1.760e-15 Identity = 64/162 (39.51%), Postives = 89/162 (54.94%), Query Frame = 2
Query: 4148 QSSVDVKVVCFTGVKPTPKERSCMKKLGVSEVESVLEATHLVAGGSGVSLKRTPKLLAGLGRCRFVVDVEWLYQSAKDGKLLDGVEYVLSDAEAEKKWGFNMRVSLGRRPEAGLLSGLFVHVDPCVAGVKGMGCPPLEEMEMVVISAGGQWLPQLPKRGGPE 4633
Q S KV+ FTGV ER+ + LG S SV EA+HLV ++RT K L LGR ++ ++WL+QS K G L EYV++D E EK +GF++R +L R E LL G +HV P GV+ PP +M ++ GG LP +P+ P+
Sbjct: 1708 QESTAPKVL-FTGVVDAHGERAVLA-LGGSMASSVAEASHLVTD----RIRRTVKFLCALGRGIPILSLDWLHQSRKAGCFLPPAEYVVTDPEQEKNFGFSLREALSRARERRLLEGYEIHVTP---GVQ----PPPPQMGEIISCCGGTVLPSMPRSYKPQ 1856 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15.3786.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15.3786.1 >prot_Ecto-sp13_S_contig15.3786.1 ID=prot_Ecto-sp13_S_contig15.3786.1|Name=mRNA_Ecto-sp13_S_contig15.3786.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1600bp MTQHMGMMDFSDEEEMDEDSNPVVGYLQVLPPNARMLREIKDGETTVGRNback to top mRNA from alignment at Ecto-sp13_S_contig15:39949..50439- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15.3786.1 ID=mRNA_Ecto-sp13_S_contig15.3786.1|Name=mRNA_Ecto-sp13_S_contig15.3786.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10491bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15:39949..50439- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15:39949..50439- >mRNA_Ecto-sp13_S_contig15.3786.1 ID=mRNA_Ecto-sp13_S_contig15.3786.1|Name=mRNA_Ecto-sp13_S_contig15.3786.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=4800bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15:39949..50439- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |