mRNA_Ecto-sp13_S_contig15.3784.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15.3784.1
Unique NamemRNA_Ecto-sp13_S_contig15.3784.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15.3784.1 vs. uniprot
Match: D7G2Z3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z3_ECTSI)

HSP 1 Score: 2484 bits (6439), Expect = 0.000e+0
Identity = 1286/1479 (86.95%), Postives = 1337/1479 (90.40%), Query Frame = 1
Query:    1 MLSSPRGETGLAETGSAPSPFAGGDRHEEHAPASADGIYAVDEKKQENQHQHQKLVQPQQPGRRPSASESNGNGRSYWRRFKVIGCMVGGALIIDLYLAFLGSRSEGVPSTRGESFLASSSAVSSSDQHSKDGSRILQFPSRTAALDDENMGIRRRSIPNLVVANGNMPYFDENGVPETGTERALPSAGIKQQTGQATVMVAGEHDVELLHNRTSAVASPSEYWITGIDPWGAQAPPQPTQPDQFNGQKVAVVVPYVGKDLPVWWDAFAEQARLNDGLVDWVIFCDQASNSQKRTLSKLVRKRSPPNIKFFPMTTRRMAWLLAGVVEPDDPSPVHGGDRRDGLESGDGDGDKSDGDVESVPETHAEIEVQENDGNEGKDSDVEAAVTSRVWEEPITEALAKNAVKRKRAASLLHQLLITSPYFIVEFKPAFGWLFREYLAEYSHWAFGDLDVLFGDMRRGWLEPTELQDFDIITFSFGDQYRAYLRGQLTIHKNKFDVNRVWTRCSHLTNYSERLEAFRVNHGLPLESAEGCYSLAAASDPSLRIKFTVKALSDVDQEDEEAVALKRGREVIIDGHGLVTLCPDLEYYYNEPPGAGAGTNYGASDADGGGNGESQGGLSPSMQDAVGPMTSVEKATGRCEHWIKPEHQTCVKDVGGSQTLFLIGGKYYKQEFINTAQSTGGRECRAGAFYHFQARLDIQLREHKRSYRSWNSRPPIYPAHFGISAGPGGIVPLPAGGWRERA-SGPGIRPPPEHTGRVKHYCLGWTERRQSRTTESGRPEQTCAVMVSSEEVVVVVLDTRNASGREERQGRTDAFHANAVTLGLVGGPADLEALLLEAAQWDGPKIIAMVFDDDDLAATREMDALKGAKYIRGGVLIVALARPPPSPDVPRMIASFPRKALMNLVTDLCETRYLLALPASARLSPRASQAVSAQLRSIRRPPYPVRQSQDSRPPSKRNSAGTGGPRAPRRSPDTLGPITLVVPFETAGEAPQFLEEREAGTSASYAWSLDSPPAGSGDISNPSNKVALPGMGSVSSTVANDGAAEDAARATSLASGHTGVAPGSAPTARGAIESAEKSAAAAGQAEVEDFAAASAGGWGNGFGITSFRDTGGDETSTRTRSYSTALGRDAVGSGLRDRGGGMLPVEEEGGTTRSAGPGAGAGRQRASTPLKISFLAPAGRAPASNGSVTGRDTRTLSRHNVRRQGPAVDSPRPASVTQWRAEQQRRGP----PASTSMGGDRAGLGRGGWEGGPDVPITTTASASLSLPGFDDDGEAQLIRDVRRRLGASSGDGAGGRASGSVSDSAVAAGGRGVEMEQDEADWVWGLLFSGPGTPGLVVDLWSPGPIFLRHVEEFGDTGCMEAAYALGLWRAGSSFQVVQGARLTPTAAVPPPLQSHDYSRDRRAFTSDQEERLFRVPGGACLRSEAVASTASIYSAFLRQVENVYRRPWSRRTGRTYQDRGGRTTNGRQAPGDNDKI 4422
            MLSSP GETGLAE GSAP+PFAG D HE+HAPASADGIY V E+KQ NQHQHQKLVQPQQPGRRPSA ESNG+GRSYWRRFKVIGCMVGGALIIDLYLAFLGSRSE VPSTRGESFLASSSAV SSDQHSKD S+ILQFPSRTAALDDENMGIRRRSIP+LV ANGN PYFDENGVPETGTERALPSAGIKQQTGQATV VAG+  VELL NRTSA+A PSEYW TGI+PWGAQAPPQPT+PDQFNGQKVAVVVPYVGKDLPVWWD FAEQARLNDGLVDW+IFCDQ          KLVRKRSPPNIKFFPMTTRRMAWLLAGVVEP DPSP HGGDR D L+ GD DGD  DGDV+   ++HAEIEVQENDGNEG+D+DVE A TSRVWEE ITE  A NAVKRKRAAS LHQLLITSPYFIVEFKPAFGWLFREYL EYSHWAFGDLDVLFGDMRRGWLEPTELQDFDIITFSFGDQYRAYLRGQLTIHKNK DVNRVW RCSHLTNYSERLEAFRVNHGLPLESAEGCYSLAAASDPSLRIKFTVKALSDVDQEDEEAVA KRGREVIIDGHGLVTLCPDLEYYYNEPPGAGAGTNYGAS+ADGGGNGE + GLSPSMQDAVGPMTSVEKA GRCEHWIKPEHQTCVKDVGGSQTL+LIGGKYYKQEFINTA STGGRECRAGAFYHFQ        EHK SYRSWNS PP+YPAHFGISAGPGGIVPLPAGGWRER  SGPG++PPPEHTGRV HYCLGWTERRQSRT ESGRPEQ CAVMVSSEEV+VV LDTRNA+G +ERQG+TDAF+AN+VTLGLVGGPADLEAL+LEAAQWDGPKIIAMV   +DLAATREMDALKGAKYIRGGVLI AL RPPPSPDVPRMIA+FPRKALMNLVTDLCETRYLL LPASARLSPRASQAVSAQLRS RRPPYPVRQS DSRPP + N+AGTGGPRAPRR+PDTLGPITLVVPF+TAGEAPQF +EREAGTSA Y    DSPPAGSG ISN SNK ALPGMGSVSS V ND AA+DAARATSLASGH GVA GSAP+A G I S E SA   GQA V+D AAASAGGWGNGFGITSF DTG +E S+RTR+YSTALG DAVGS LRD+GGG+LPVE EGGTTRS G GAG GRQRA+TPLKISFLAPAGRAP SNGSVTGR+TRTLSRHNVRRQGPAVDSPRPASVTQWR EQQRRGP     A  S  GDRAGLGRGGWEGGPDVP+TTTASASLSLPGFDDDGEAQLIRDVRRRLG+S GDGAGG+ASGSVSDSAVA GG  VEMEQDEADWVW LLFSGPGTPGLVVDLWSPGPIFLRHVEEFGDTGCMEAAYALGLWRAGSSFQVVQGARLT         QSHDYSRDRRAFTSDQEERLFRVPGGACLRS+AVASTASIYSAFLRQVENVYRRPWSRRTGRTYQDRG RTTNGRQAPGDNDKI
Sbjct:    1 MLSSPDGETGLAEAGSAPNPFAGADDHEKHAPASADGIYGVGERKQNNQHQHQKLVQPQQPGRRPSAGESNGSGRSYWRRFKVIGCMVGGALIIDLYLAFLGSRSEEVPSTRGESFLASSSAVPSSDQHSKDRSQILQFPSRTAALDDENMGIRRRSIPDLVAANGNTPYFDENGVPETGTERALPSAGIKQQTGQATVKVAGKLFVELLDNRTSAIAGPSEYWTTGINPWGAQAPPQPTEPDQFNGQKVAVVVPYVGKDLPVWWDVFAEQARLNDGLVDWIIFCDQ----------KLVRKRSPPNIKFFPMTTRRMAWLLAGVVEPGDPSPAHGGDRGDVLDGGDCDGDNFDGDVDGAQKSHAEIEVQENDGNEGEDADVETAATSRVWEESITEVFAMNAVKRKRAASFLHQLLITSPYFIVEFKPAFGWLFREYLTEYSHWAFGDLDVLFGDMRRGWLEPTELQDFDIITFSFGDQYRAYLRGQLTIHKNKADVNRVWRRCSHLTNYSERLEAFRVNHGLPLESAEGCYSLAAASDPSLRIKFTVKALSDVDQEDEEAVAQKRGREVIIDGHGLVTLCPDLEYYYNEPPGAGAGTNYGASNADGGGNGERKEGLSPSMQDAVGPMTSVEKAKGRCEHWIKPEHQTCVKDVGGSQTLYLIGGKYYKQEFINTAASTGGRECRAGAFYHFQ--------EHKLSYRSWNSCPPVYPAHFGISAGPGGIVPLPAGGWRERVVSGPGVKPPPEHTGRVNHYCLGWTERRQSRTLESGRPEQACAVMVSSEEVIVV-LDTRNAAGEQERQGQTDAFNANSVTLGLVGGPADLEALMLEAAQWDGPKIIAMVLGGEDLAATREMDALKGAKYIRGGVLIAALVRPPPSPDVPRMIATFPRKALMNLVTDLCETRYLLTLPASARLSPRASQAVSAQLRSNRRPPYPVRQSPDSRPPPETNNAGTGGPRAPRRTPDTLGPITLVVPFKTAGEAPQFPKEREAGTSAPYPG--DSPPAGSGGISNTSNKDALPGMGSVSSNVVNDIAAQDAARATSLASGHVGVALGSAPSAGGTIGSGENSAVGIGQAAVKDSAAASAGGWGNGFGITSFSDTGSNEASSRTRTYSTALGGDAVGSRLRDQGGGVLPVEVEGGTTRSVGAGAGVGRQRAATPLKISFLAPAGRAPGSNGSVTGRETRTLSRHNVRRQGPAVDSPRPASVTQWRTEQQRRGPLESHAAIPSKSGDRAGLGRGGWEGGPDVPVTTTASASLSLPGFDDDGEAQLIRDVRRRLGSSPGDGAGGQASGSVSDSAVAVGGXXVEMEQDEADWVWELLFSGPGTPGLVVDLWSPGPIFLRHVEEFGDTGCMEAAYALGLWRAGSSFQVVQGARLTTXXXXXXXXQSHDYSRDRRAFTSDQEERLFRVPGGACLRSDAVASTASIYSAFLRQVENVYRRPWSRRTGRTYQDRGDRTTNGRQAPGDNDKI 1458          
BLAST of mRNA_Ecto-sp13_S_contig15.3784.1 vs. uniprot
Match: A0A6H5L1U3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1U3_9PHAE)

HSP 1 Score: 2100 bits (5440), Expect = 0.000e+0
Identity = 1149/1458 (78.81%), Postives = 1186/1458 (81.34%), Query Frame = 1
Query:    1 MLSSPRGETGLAETGSAPSPFAGGDRHEEHAPASADGIYAVDEKKQENQHQHQKLVQPQQPGRRPSASESNGNGRSYWRRFKVIGCMVGGALIIDLYLAFLGSRSEGVPSTRGESFLASSSAVSSSDQHSKDGSRILQFPSRTAALDDENMGIRRRSIPNLVVANGNMPYFDENGVPETGTERALPSAGIKQQTGQATVMVAGEHDVELLHNRTSAVASPSEYWITGIDPWGAQAPPQPTQPDQFNGQKVAVVVPYVGKDLPVWWDAFAEQARLNDGLVDWVIFCDQASNSQKRTLS-KLVRKRSPPNIKFFPMTTRRMAWLLAGVVEPDDPSPVHGGDRRDGLESGDGDGDKSDGDVESVPETHAEIEVQENDGNEGKDSDVEAAVTSRVWEEPITEALAKNAVKRKRAASLLHQLLITSPYFIVEFKPAFGWLFREYLAEYSHWAFGDLDVLFGDMRRGWLEPTELQDFDIITFSFGDQYRAYLRGQLTIHKNKFDVNRVWTRCSHLTNYSERLEAFRVNHGLPLESAEGCYSLAAASDPSLRIKFTVKALSDVDQEDEEAVALKRGREVIIDGHGLVTLCPDLEYYYNEPPGAGAGTNYGASDADGGGNGESQGGLSPSMQDAVGPMTSVEKATGRCEHWIKPEHQTCVKDVGGSQTLFLIGGKYYKQEFINTAQSTGGRECRAGAFYHFQARLDIQL---------REHKRSYRSWNSRPPIYPAHFGISAGPGGIVPLPAGGWRERASGPGIRPPPEHTGRVKHYCLGWTERRQSRTTESGRPEQTCAVMVSSEEVVVVVLDTRNASGREERQGRTDAFHANAVTLGLVGGPADLEALLLEAAQWDGPKIIAMVFDDDDLAATREMDALKGAKYIRGGVLIVALARPPPSPDVPRMIASFPRKALMNLVTDLCETRYLLALPASARLSPRASQAVSAQLRSIRRPPYPVRQ------SQDSRPPSKRNSAGTGGPRAPRRSPDTLGPITLVVPFETAGEAPQFLEEREAGTSASYAWSLDSPPAGSGDISNPSNKVALPGMGSVSSTVANDGAAEDAARATSLASGHTGVAPGSAPTARGAIESAEKSAAAAGQAEVEDFAAASAGGWGNGFGITSFRDTGGDETSTRTRSYSTALGRDAVGSGLRDRGGGMLPVEEEGGTTRSAGPGAGAGRQRASTPLKISFLAPAGRAPASNGSVTGRDTRTLSRHNVRRQGPAVDSPRPASVTQWRAEQQRRGPPAST----SMGGDRAGLGRGGWEGGPDVPITTTASASLSLPGFDDDGEAQLIRDVRRRLGASSGDGAGGRASGSVSDSAVAAGGRGVEMEQDEADWVWGLLFSGPGTPGLVVDLWSPGPIFLRHVEEFGDTGCMEAAYALGLWRAGSSFQVVQGARLTPTAAVPPPLQSHDYSRDRRAFTSDQEERLFRVPGGACLRSEAVASTASIYSAFLRQV 4314
            MLSSP GETGLAE GSAPSPFAG DRHEEHAPASADGI+AV EKKQENQ QHQKLVQPQ PGRRPSASESNGNGR Y RRFKVIGCMVGGALIIDLYLAFLGSRSE       ES L SSSAVSSSDQHSKD SRILQ PSRTAALDDENMGIRRRSIP+LV  N NMPYFDENGVP+TGTERALPSA IKQQTGQATV VA  HDVELL NRTSAVA P+EYWITG DPW  QAPPQPTQPDQFNGQKVAVV+PYVGKDLPVWWDAFAEQARLNDGLVDW+IFCDQA  +    LS KLVRK+SPPNIKFFPMTTRRMAWLLAGVVEP+DP PVHGGDR DGL+ GDG+GDKSDGDVESVPETHAEIEVQENDGNEGKDS VE A  SR+WEE ITEALAKNAVKRKRAAS LHQL ITSPYFIVEFKPAFGWLFREYL EYSHWAFGDLDVLFGDMRRGWLEPTELQDFDIITF      RAYLRGQLTIHKNK DVNRVW RCSHLTNYSERLEA                                  LSDVDQED EAVAL RGREVIIDGHGLVTLCPDLE +YNEP GAGAGTNYG S+ADGGGN ES+GGLSPSMQ AVGPMT VEKA GRCEHWIKPEHQTCVKDVGGSQTLFLIGGKYYKQ  I        +      FY    R    L         +EHKRSYR+WNSRPP+YPAHFGISAGPGGIVPLPAGGWR+R SGPGI PPP                                        V+VVLDTRNA+GREERQGRTDA +ANAVTLGLVGGPADLEA +LEAAQWDGPKIIAMV D DDL ATREMDA KGAKY+RGGVLIVALARPPP PDVPRMIA+FPRKALMNLVTDLCETRYLLALPASARL+PRASQAVSAQLRS RRPPYPVRQ      SQDSRPPSK NSAGTG PRAPRR+PDTLGP TLVVPFETAGEAPQF EEREAGTSASYAWSL SPPA SG ISN SN   LPG+GSVSSTVAND AAEDAARATSLAS H GVA GSAPTA GAI S EKSA   GQA V+D A ASA GWGNGFGITSF +TG DETS+R R YSTALG DAV S LRDRGGGMLPVE EGGT RSAG GAGAGR+RA+TPLKISFLAPA +AP  NGSVTGRDTRTLSRH VRRQGP VDSPRPASVTQWR EQ RRGPP S     S GGDRAGLGRGG EGGPDVPITTTASASLSLPGFDDDGEAQLIRDVRRRLG+S GDGAG RASGSVSDSAVAAGG GV    DEADWVW LLFSGPGTPGLVVDLWSPGP+FLRHVE                        VVQGARLTPTAAVPPPLQSHDYSRDRRAFTSDQEERLFRVPGGACLRSEAVASTASIYS FLRQV
Sbjct:    1 MLSSPDGETGLAEAGSAPSPFAGTDRHEEHAPASADGIFAVREKKQENQRQHQKLVQPQHPGRRPSASESNGNGRRYRRRFKVIGCMVGGALIIDLYLAFLGSRSE-------ESLLVSSSAVSSSDQHSKDESRILQLPSRTAALDDENMGIRRRSIPDLVAVNENMPYFDENGVPQTGTERALPSASIKQQTGQATVKVAVNHDVELLENRTSAVADPTEYWITGKDPWRGQAPPQPTQPDQFNGQKVAVVIPYVGKDLPVWWDAFAEQARLNDGLVDWIIFCDQAKLAPTVALSLKLVRKQSPPNIKFFPMTTRRMAWLLAGVVEPEDPLPVHGGDRGDGLDGGDGNGDKSDGDVESVPETHAEIEVQENDGNEGKDSGVETAA-SRIWEESITEALAKNAVKRKRAASFLHQLFITSPYFIVEFKPAFGWLFREYLVEYSHWAFGDLDVLFGDMRRGWLEPTELQDFDIITF------RAYLRGQLTIHKNKVDVNRVWRRCSHLTNYSERLEA----------------------------------LSDVDQEDGEAVALMRGREVIIDGHGLVTLCPDLECFYNEPLGAGAGTNYGTSNADGGGNDESKGGLSPSMQVAVGPMTIVEKAKGRCEHWIKPEHQTCVKDVGGSQTLFLIGGKYYKQGTIVLLLPRNVK------FYQSNTRPAKTLYLHHGYKGCKEHKRSYRTWNSRPPVYPAHFGISAGPGGIVPLPAGGWRDRVSGPGIMPPP----------------------------------------VIVVLDTRNAAGREERQGRTDAVNANAVTLGLVGGPADLEAFMLEAAQWDGPKIIAMVLDGDDLTATREMDAQKGAKYVRGGVLIVALARPPPRPDVPRMIATFPRKALMNLVTDLCETRYLLALPASARLNPRASQAVSAQLRSNRRPPYPVRQPYPVWQSQDSRPPSKPNSAGTGSPRAPRRTPDTLGPFTLVVPFETAGEAPQFPEEREAGTSASYAWSLYSPPADSGGISNTSNTGELPGIGSVSSTVANDAAAEDAARATSLASRHIGVALGSAPTAGGAIGSGEKSAVGLGQAAVKDSAVASASGWGNGFGITSFSNTGSDETSSRMRGYSTALGGDAVRSRLRDRGGGMLPVEVEGGTIRSAGSGAGAGRRRAATPLKISFLAPAVKAPGRNGSVTGRDTRTLSRHYVRRQGPTVDSPRPASVTQWRTEQLRRGPPESLATIPSKGGDRAGLGRGGGEGGPDVPITTTASASLSLPGFDDDGEAQLIRDVRRRLGSSPGDGAGSRASGSVSDSAVAAGGGGVF---DEADWVWELLFSGPGTPGLVVDLWSPGPLFLRHVE------------------------VVQGARLTPTAAVPPPLQSHDYSRDRRAFTSDQEERLFRVPGGACLRSEAVASTASIYSVFLRQV 1337          
BLAST of mRNA_Ecto-sp13_S_contig15.3784.1 vs. uniprot
Match: A0A6H5JLL1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL1_9PHAE)

HSP 1 Score: 395 bits (1015), Expect = 1.560e-113
Identity = 251/705 (35.60%), Postives = 360/705 (51.06%), Query Frame = 1
Query:  727 DQFNG---QKVAVVVPYVGKDLPVWWDAFAEQARLNDGLVDWVIFCDQASNSQKRTLSKLVRKRSPPNIKFFPMTTRRMAWLLAGVVEPDDPSPVHGGDRRDGLESGDGDGDKSDGDVESVPETHAEIEVQENDGNEGKDSDVEAAVTSRVWEEPITEALAKNAVKRKRAASLLHQLLITSPYFIVEFKPAFGWLFREYLAEYSHWAFGDLDVLFGDMRRGWLEPTELQDFDIITFSFGDQYRAYLRGQLTIHKNKFDVNRVWTRCSHLTNYSERLEAFRVNHGLPLESAEGCYSLAAASDPSLRIKFTVKALSDVD---QEDEEAVALKRGREVIIDGHGLVTLCPDLEYYYNEPPGAGAGTNYGASDADGGGNGESQGGLSPSMQDAVGPMTSVEKATGR--CEHWIKPEHQTCVK--DVGGSQTLFLIGGKYYKQEFINTAQSTGGRECRAGAFYHFQARLDIQLREHKRSYRSWNSRPPIYPAHFGISAGPGGIVPLPAGGWRERASGPGIRPPPEHTGRVKHYCLGWTERRQSRTTESGRPEQTCAVMVSSEEVVVVVLDTRNASGREERQGRTDAFHANAVTLGLVGGPADLEALLLEAAQWDGPKIIAMVFDDDDLAATREMDALKGAKYIRGGV--LIVALARPPPSPDVPRMIASFPRKALMNLVTDLCETRYLLALPASARLSPRASQAVSAQLR 2805
            D+ NG    +VAV++PY G  LP W+DAF + A LN  LVDW+IFC++           L + ++PPN++    +   +AW+LAGVV P                           D +  P+ +               SD   A+   + +    +  A+N   R  AA  + +LL  +PY++VEFKPA GW+FREY+ +Y+HWA+GDLDV FGD+ +GWLEP+E++D+DIIT+SFGDQ RAYLRGQLT+HK+   VN +W  C HL+NY  R+E         LESAEGCYS+A      ++ K+ VK  +D+    Q+D+E        EV+I G GLV  CP  +           G      + D GG           MQ   G    VEK      CE+WI P  QTC+K  +      +FL+ G+YY++EF+N  Q      C  GAF+HFQ        E K +YR+WN+RP + P H G+ AG GG+VPLP G W      P   PP +       YCL W+   + RT E+   +  C + ++ ++ ++ + D+R   G              AVTLG VGG +D+  LL     W+GPKII ++ ++        +D ++  + + GG+    +     P S          P KAL+N V DLC+TR+LL LP+  R++  A QAV   L+
Sbjct:  151 DEDNGYGDMRVAVLIPYSGPGLPTWFDAFTDLAALNKDLVDWLIFCEE----------DLAQVKTPPNVRMMSTSPAELAWMLAGVVYP--------------------------ADADERPDVYV--------------SDFHMALMGDLTD---LQMHARNV--RGTAARFIQKLLAKNPYYMVEFKPALGWVFREYIKDYTHWAYGDLDVFFGDLTKGWLEPSEMRDYDIITYSFGDQQRAYLRGQLTVHKSIHKVNHIWRDCPHLSNYYRRIERTMETKQYNLESAEGCYSMALMYSKDVKAKYAVKVFTDMPGGKQDDQE--------EVVITGDGLVKRCPQQQ-----------GRRGDVVEPDFGGK----------MQVDRGEYFPVEKEEQGYFCEYWISPNFQTCLKLKESLTKTNVFLLEGRYYEREFVNLWQDKVEDGCSMGAFHHFQ--------ELKGNYRAWNTRPQMSPVHRGMVAGNGGLVPLPNGDWHAMTLDPNAPPPADRDRFTYRYCLQWSVENE-RTKEA---KFNCDISLTPKDGLLTLHDSRRQEG---------LIGGAAVTLGGVGGVSDVPRLLRSCRDWEGPKIIVLMLNNRQRERVVVLDLIRAEEKV-GGLDNAYIVFFFSPSSGGHEVNGGHLPTKALLNAVGDLCQTRHLLILPSDFRIARGAEQAVVTALK 749          
BLAST of mRNA_Ecto-sp13_S_contig15.3784.1 vs. uniprot
Match: D7FVE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE1_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 3.510e-59
Identity = 118/272 (43.38%), Postives = 158/272 (58.09%), Query Frame = 1
Query: 1216 RKRAASLLHQLLITSPYFIVEFKPAFGWLFREYLAEYSHWAFGDLDVLFGDMRRGWLEPTELQDFDIITFSFGDQYRAYLRGQLTIHKNKFDVNRVWTRCSHLTNYSERLEAFRVNHGLPLESAEGCYSLAAASDPSLRIKFTVKALSDVD---QEDEEAVALKRGREVIIDGHGLVTLCPDLEYYYNEPPGAGAGTNYGASDADGGGNGESQGGLSPSMQDAVGPMTSVEKATGR--CEHWIKPEHQTCVK--DVGGSQTLFLIGGKYYKQ 2010
            R  AA  + +LL  +PY++VEFKPA GW+FREYL +Y+HWA+GDLDV FGD+ +GWLEP+E++D+DIIT+SFGDQ RAYLRGQLT+HK+   VN +W  C HL+NY  R+E         LESAEGCYS+A      ++ K+ VK  +D+    Q+D+E        EV+I G GLV  CP  +           G      + D GG           MQ   G    VE       CE+WI P  QTC+K  +      +FL+ G+YY++
Sbjct:   15 RGTAARFIQKLLAKNPYYMVEFKPALGWVFREYLKDYTHWAYGDLDVFFGDLTKGWLEPSEMRDYDIITYSFGDQQRAYLRGQLTVHKSIHKVNHIWRGCPHLSNYYRRIERTMETKQYNLESAEGCYSMALMYSKDVKAKYAVKVFTDMPGGKQDDQE--------EVVITGDGLVKRCPQQQ-----------GRRGDVVEPDFGGK----------MQVDKGEYFPVETEEQGYFCEYWISPNFQTCLKLKESLTKTNVFLLEGRYYER 257          
BLAST of mRNA_Ecto-sp13_S_contig15.3784.1 vs. uniprot
Match: A0A448ZCW1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZCW1_9STRA)

HSP 1 Score: 169 bits (427), Expect = 1.140e-38
Identity = 107/317 (33.75%), Postives = 165/317 (52.05%), Query Frame = 1
Query: 1216 RKRAASLLHQLLITSPYFIVEFKPAFGWLFREYLAEYSHWAFGDLDVLFGDMRRGWLEPTELQDFDIITFSFGDQYRAYLRGQLTIHKNKFD-VNRVWTRCSHLTNYSERLEAFRVN-HGLPLESAEGCYSLAAASDPSLRIKFTVKALSDVDQEDEE-------AVALKRGREVIIDG---HGLVTLCPDLEYYYNEPPGAGAGTNYGASDADGGGNGESQGGLSPSMQDAVGPMTSVEKATGRCEHWIKPEHQT--CVKDVGGSQTLFLIGGKYYKQEFINTAQSTGGRECRAGAFYHFQARLDIQLREHKRSYR 2124
            +++ A +L +L+   PY +VEFKPA G +F E+L  YSHW + DLD+LFGD+ R W+ P EL DFDI+T+ FGDQ + YLRGQ T H+N  + +N++W +C +L++   R   F      L LESAEGCYS A  +   +++K+ VKA +DV  +D             K+ + VI      H    L     ++  +      G+ Y  S+            L   +   +    +V+K   +C HW+K ++Q+  C+ ++  + TL+ I G+ YK++F   A+  G        F+HFQ        E KR YR
Sbjct:  175 KEKLAGILTKLIRKYPYVMVEFKPALGHVFEEFLEGYSHWGYSDLDILFGDLER-WITPDELNDFDIVTYGFGDQDKVYLRGQFTFHRNDPERINQLWRKCDYLSHMDTRFANFLSGKEKLSLESAEGCYSEAILNTDDIKVKYAVKAFTDVQTKDTAYTHGVYVTTGTKKDKTVIYKAGSDHPEELLTLPRNWFEKK------GSLYANSNEM----------LYRPVGKRIPLSPTVQKEDVKCMHWVKSKYQSKLCIDNIDSNDTLYWIHGQLYKEKF-EIAKMPGN--IMTAPFFHFQ--------EWKRYYR 463          
BLAST of mRNA_Ecto-sp13_S_contig15.3784.1 vs. uniprot
Match: A0A835Z713_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z713_9STRA)

HSP 1 Score: 148 bits (374), Expect = 5.140e-35
Identity = 68/144 (47.22%), Postives = 90/144 (62.50%), Query Frame = 1
Query: 1252 ITSPYFIVEFKPAFGWLFREYLAEYSHWAFGDLDVLFGDMRRGWLEPTELQDFDIITFSFGDQYRAYLRGQLTIHKNKFDVNRVWTRCSHLTNYSERLEAFRVNHGLPLESAEGCYSLAAASDPSLRIKFTVKALSDVDQEDEE 1683
            +  PY++VEFKP  GW+ R+YL  Y+HW FGD+D++FG +  GWL   EL  +D I+FSFGDQYRAYLRGQLTI KN    N VW  C H + Y +R+        L   S EGC S A    P L++   V+A SDV  ++++
Sbjct:  206 VKHPYWLVEFKPVLGWILRDYLINYTHWGFGDMDIIFGHLANGWLPAEELNQWDFISFSFGDQYRAYLRGQLTIQKNTPKANNVWRLCKHFSQYMQRIRQEPPWGPLMRFSGEGCCSWATRLVPGLKVLIPVRAGSDVAHKEQK 349          
BLAST of mRNA_Ecto-sp13_S_contig15.3784.1 vs. uniprot
Match: A0A1Z5JIW8_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIW8_FISSO)

HSP 1 Score: 152 bits (384), Expect = 1.450e-33
Identity = 103/327 (31.50%), Postives = 150/327 (45.87%), Query Frame = 1
Query: 1201 KNAVKRKRAASLLHQLLITSPYFIVEFKPAFGWLFREYLAEYSHWAFGDLDVLFGDMRRGWLEPTELQDFDIITFSFGDQYRAYLRGQLTIHKNKFDVNRVWTRCSHLTNYSERLEAFRVNHG-LPLESAEGCYSLAAASDPSLRIKFTVKALSDVDQEDEEAVALKRGREVIIDGHGLVTLCPDLEYYYNEPPGAGAGTNYGASDADGGGNGESQGGLSPSMQDAVGPMTSVEKATG---------------RCEHWIKPEHQT--CVKD-VGGSQTLFLIGGKYYKQEFINTAQSTGGRECRAGAFYHFQARLDIQLREHKRSYR 2124
            +  ++R     L+  LL   PY +VEFKPA G++F++ L  YSHW + DLD++FGD+   W+   EL ++DI+T+S+GDQ R YLRGQ T HKN   VN +W  C +L +  ER ++   + G   +ESAEGCYS A      +R+K+   A +D     +EA    R    I+  HG+                AG      A              L PS  D  G  T  + + G               +C +W+  E+Q   C+   +   +TL+ I G  YKQ+ +   +           F+HFQ        E KR YR
Sbjct:  114 ETVIERSSLEELMTTLLDLRPYALVEFKPALGYIFQDLLEGYSHWGYTDLDIVFGDLSH-WITEDELLNYDIVTYSYGDQRRLYLRGQFTFHKNNDKVNNIWRYCRYLRDLDERFDSIVKSKGHFRVESAEGCYSAAVLDRNDVRVKYVPHAWTDT---HDEAGGTFRD---ILSSHGVYLARSKSRQVLYRAKSAGENARLVAR-------------LDPSYWDKNGAYTQRDISLGSLEAIDIADAVHNDVKCMYWVPSEYQAKLCLSALIASDETLYWINGSLYKQKVVLHDEGLAD----TAPFFHFQ--------EWKRHYR 408          
BLAST of mRNA_Ecto-sp13_S_contig15.3784.1 vs. uniprot
Match: B7FVG7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FVG7_PHATC)

HSP 1 Score: 152 bits (384), Expect = 1.500e-33
Identity = 107/322 (33.23%), Postives = 157/322 (48.76%), Query Frame = 1
Query: 1207 AVKRKRAASLLHQLLITSPYFIVEFKPAFGWLFREYLAEYSHWAFGDLDVLFGDMRRGWLEPTELQDFDIITFSFGDQYRAYLRGQLTIHKNKFDVNRVWTRCSHLTNYSERL-EAFRVNHGLPLESAEGCYSLAAASDPSLRIKFTVKALSDVDQEDEEAVALKRGREVIIDGHGLVTLCPDLEYYYNEPPGAGAGTNYGASDADGGGNGESQGGLSPS----MQDAVGPMTSVEKATGR---CEHWIKPEHQT--CVKD--VGGSQTLFLIGGKYYKQ----EFINTAQSTGGRECRAGAFYHFQARLDIQLREHKRSYR 2124
            A  R     LL + L   PY +VEFKPA G++F+EYL  YSHW + DLD+LFGD+ R W+ P EL +FD++T+ FGDQ+R Y RGQ T H+N   VN +W +C +L+   +R  +          ESAEGCYS+A      +R+K+ VKA +D   +D           V   G  L        +   +   A  G   G   A   G  ES   +       +Q + G   S++    +   C +W++  +Q+  C+++  V  S T++ I G+ +KQ    E + +  ST         F+HFQ        E KR YR
Sbjct:  144 AFSRDNMILLLAKHLEQFPYALVEFKPALGYIFQEYLESYSHWGYSDLDMLFGDLSR-WITPDELTEFDVVTYGFGDQHRLYARGQFTFHRNTPRVNTLWRKCEYLSRMDQRFAKILSEKKKFKFESAEGCYSVALLQHYDIRVKYAVKAWTDTQAKDT----------VYTHGVYLARSASSFRHVIYKAQSAAQGKVLGELGA---GWFESHDYVYADRQRPLQRSTGERESLDLPNMKDVNCMYWVRGTYQSELCLQESAVSSSDTVYWINGQLFKQPYETEHLESKVSTA-------PFFHFQ--------EWKRYYR 436          
BLAST of mRNA_Ecto-sp13_S_contig15.3784.1 vs. uniprot
Match: A0A7S2LG80_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LG80_9STRA)

HSP 1 Score: 138 bits (347), Expect = 2.410e-32
Identity = 70/148 (47.30%), Postives = 94/148 (63.51%), Query Frame = 1
Query: 1237 LHQLLITSPYFIVEFKPAFGWLFREYLAEYSHWAFGDLDVLFGDMRRGWLEPTELQDFDIITFSFGDQYRAYLRGQLTIHKNKFDV-NRVWTRCSHLTN----YSERLEAFRVNHGLPLESAEGCYSLAAASDPSLRIKFTVKALSDV 1665
            L   +I  PY +VE+KPAFG +F +YL  YSHW + D+DV+FGDM R W++  E  D+DI+T+ FGDQ + YLRGQ T HKN   V N++W  C +L+     YSE+  + R       ESAEGCYS A      +++K+ VKA SDV
Sbjct:   22 LSSQIIYYPYILVEYKPAFGHIFADYLTSYSHWGYSDIDVVFGDMTR-WIDTDEWNDYDIVTYGFGDQDKLYLRGQFTFHKNDPKVINQMWRHCKYLSEMDIRYSEKNASERK-----FESAEGCYSQAVIMRKDIKVKWAVKAFSDV 163          
BLAST of mRNA_Ecto-sp13_S_contig15.3784.1 vs. uniprot
Match: A0A7S0Q6M5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q6M5_9EUKA)

HSP 1 Score: 140 bits (353), Expect = 2.570e-32
Identity = 104/321 (32.40%), Postives = 155/321 (48.29%), Query Frame = 1
Query: 1222 RAASLLHQ----LLITSPYFIVEFKPAFGWLFREYLAEYSHWAFGDLDVLFGDMRRGWLEPTELQDFDIITFSFGDQYRAYLRGQLTIHKNKFDVNRVWTRCSHLTN-----------YSERLEAFRV-NHGLPLESAEGCYSLAAASDPSLRIKFTVKALSDVDQEDEEAVALKRGREVIIDGHGLVTLCP-----DLEYYYN---EPPGAGAGTNYGASDADGGGNGESQGGLSPSMQDAVGPMTSVE-KATGRCEHWIKPEHQTCVKDVG----------GSQTLFLIGGKYYKQEFINTAQSTGGRECRAGAFYHFQ 2079
            R ASLL +    +L   P  + E+KPAFG +F +Y+AEYSHW + DLD++ G+M+  ++E +EL   DI+T+SFGD    YLRGQ T+H+N  DV+ +W  C HL +           +  R+E+  + N+    +SAEGCYS  AAS P +RIK   K    +    +E +            +G V  CP     D+E  ++   +P  A                        P +Q+A+G M  ++  A G C  W+  E++ C  ++           G  T +L  GK+Y Q F +T        CR GAF+H Q
Sbjct:   25 RNASLLIRSMRFMLEKWPRLVAEYKPAFGSIFEQYIAEYSHWGYCDLDMVMGNMQL-FIEHSELASQDIVTYSFGDVDALYLRGQWTVHRNTRDVSLLWKGCPHLGDDLQKELLMKVAWVRRMESRGIKNYAKRFQSAEGCYSHRAASAPGIRIKMAHKQFVGLAVPSDEQIYFV---------NGAVWQCPKGEAVDVELLFSNSQQPCAANL----------------------PGVQEALGAMLPLQVSAEGGCGKWMPVEYRMCAVNMPEPPEREQNTIGFNT-YLRDGKFYAQRFRSTLPVLDNG-CRQGAFFHMQ 311          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15.3784.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2Z3_ECTSI0.000e+086.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1U3_9PHAE0.000e+078.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLL1_9PHAE1.560e-11335.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVE1_ECTSI3.510e-5943.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A448ZCW1_9STRA1.140e-3833.75Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A835Z713_9STRA5.140e-3547.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1Z5JIW8_FISSO1.450e-3331.50Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
B7FVG7_PHATC1.500e-3333.23Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S2LG80_9STRA2.410e-3247.30Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S0Q6M5_9EUKA2.570e-3232.40Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15contigEcto-sp13_S_contig15:19119..31445 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score2516.1
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7G2Z3
Model size5055
Hectar predicted targeting categoryother localisation
Exons16
EggNOG OGs2BMGJ@1,2S1KX@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-09_004310.1
Cds size4425
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15.3784.1prot_Ecto-sp13_S_contig15.3784.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15 19119..30815 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462799.1276762-CDS-Ecto-sp13_S_contig15:19118..200091681462799.1276762-CDS-Ecto-sp13_S_contig15:19118..20009Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15 19119..20009 +
1681462799.1413152-CDS-Ecto-sp13_S_contig15:20791..211571681462799.1413152-CDS-Ecto-sp13_S_contig15:20791..21157Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15 20792..21157 +
1681462799.1518133-CDS-Ecto-sp13_S_contig15:21943..221131681462799.1518133-CDS-Ecto-sp13_S_contig15:21943..22113Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15 21944..22113 +
1681462799.1610355-CDS-Ecto-sp13_S_contig15:22529..226501681462799.1610355-CDS-Ecto-sp13_S_contig15:22529..22650Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15 22530..22650 +
1681462799.1767626-CDS-Ecto-sp13_S_contig15:23038..231401681462799.1767626-CDS-Ecto-sp13_S_contig15:23038..23140Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15 23039..23140 +
1681462799.185327-CDS-Ecto-sp13_S_contig15:23726..239451681462799.185327-CDS-Ecto-sp13_S_contig15:23726..23945Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15 23727..23945 +
1681462799.196151-CDS-Ecto-sp13_S_contig15:24213..243551681462799.196151-CDS-Ecto-sp13_S_contig15:24213..24355Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15 24214..24355 +
1681462799.2094042-CDS-Ecto-sp13_S_contig15:24626..247181681462799.2094042-CDS-Ecto-sp13_S_contig15:24626..24718Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15 24627..24718 +
1681462799.227951-CDS-Ecto-sp13_S_contig15:25467..256171681462799.227951-CDS-Ecto-sp13_S_contig15:25467..25617Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15 25468..25617 +
1681462799.239455-CDS-Ecto-sp13_S_contig15:26011..261311681462799.239455-CDS-Ecto-sp13_S_contig15:26011..26131Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15 26012..26131 +
1681462799.2482724-CDS-Ecto-sp13_S_contig15:26537..266961681462799.2482724-CDS-Ecto-sp13_S_contig15:26537..26696Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15 26538..26696 +
1681462799.2640889-CDS-Ecto-sp13_S_contig15:27050..272501681462799.2640889-CDS-Ecto-sp13_S_contig15:27050..27250Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15 27051..27250 +
1681462799.2721875-CDS-Ecto-sp13_S_contig15:27783..290981681462799.2721875-CDS-Ecto-sp13_S_contig15:27783..29098Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15 27784..29098 +
1681462799.2799726-CDS-Ecto-sp13_S_contig15:29720..298461681462799.2799726-CDS-Ecto-sp13_S_contig15:29720..29846Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15 29721..29846 +
1681462799.2882898-CDS-Ecto-sp13_S_contig15:30067..302051681462799.2882898-CDS-Ecto-sp13_S_contig15:30067..30205Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15 30068..30205 +
1681462799.2971568-CDS-Ecto-sp13_S_contig15:30701..308151681462799.2971568-CDS-Ecto-sp13_S_contig15:30701..30815Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15 30702..30815 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462799.3056924-UTR-Ecto-sp13_S_contig15:30815..314451681462799.3056924-UTR-Ecto-sp13_S_contig15:30815..31445Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15 30816..31445 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15.3784.1

>prot_Ecto-sp13_S_contig15.3784.1 ID=prot_Ecto-sp13_S_contig15.3784.1|Name=mRNA_Ecto-sp13_S_contig15.3784.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1475bp
MLSSPRGETGLAETGSAPSPFAGGDRHEEHAPASADGIYAVDEKKQENQH
QHQKLVQPQQPGRRPSASESNGNGRSYWRRFKVIGCMVGGALIIDLYLAF
LGSRSEGVPSTRGESFLASSSAVSSSDQHSKDGSRILQFPSRTAALDDEN
MGIRRRSIPNLVVANGNMPYFDENGVPETGTERALPSAGIKQQTGQATVM
VAGEHDVELLHNRTSAVASPSEYWITGIDPWGAQAPPQPTQPDQFNGQKV
AVVVPYVGKDLPVWWDAFAEQARLNDGLVDWVIFCDQASNSQKRTLSKLV
RKRSPPNIKFFPMTTRRMAWLLAGVVEPDDPSPVHGGDRRDGLESGDGDG
DKSDGDVESVPETHAEIEVQENDGNEGKDSDVEAAVTSRVWEEPITEALA
KNAVKRKRAASLLHQLLITSPYFIVEFKPAFGWLFREYLAEYSHWAFGDL
DVLFGDMRRGWLEPTELQDFDIITFSFGDQYRAYLRGQLTIHKNKFDVNR
VWTRCSHLTNYSERLEAFRVNHGLPLESAEGCYSLAAASDPSLRIKFTVK
ALSDVDQEDEEAVALKRGREVIIDGHGLVTLCPDLEYYYNEPPGAGAGTN
YGASDADGGGNGESQGGLSPSMQDAVGPMTSVEKATGRCEHWIKPEHQTC
VKDVGGSQTLFLIGGKYYKQEFINTAQSTGGRECRAGAFYHFQARLDIQL
REHKRSYRSWNSRPPIYPAHFGISAGPGGIVPLPAGGWRERASGPGIRPP
PEHTGRVKHYCLGWTERRQSRTTESGRPEQTCAVMVSSEEVVVVVLDTRN
ASGREERQGRTDAFHANAVTLGLVGGPADLEALLLEAAQWDGPKIIAMVF
DDDDLAATREMDALKGAKYIRGGVLIVALARPPPSPDVPRMIASFPRKAL
MNLVTDLCETRYLLALPASARLSPRASQAVSAQLRSIRRPPYPVRQSQDS
RPPSKRNSAGTGGPRAPRRSPDTLGPITLVVPFETAGEAPQFLEEREAGT
SASYAWSLDSPPAGSGDISNPSNKVALPGMGSVSSTVANDGAAEDAARAT
SLASGHTGVAPGSAPTARGAIESAEKSAAAAGQAEVEDFAAASAGGWGNG
FGITSFRDTGGDETSTRTRSYSTALGRDAVGSGLRDRGGGMLPVEEEGGT
TRSAGPGAGAGRQRASTPLKISFLAPAGRAPASNGSVTGRDTRTLSRHNV
RRQGPAVDSPRPASVTQWRAEQQRRGPPASTSMGGDRAGLGRGGWEGGPD
VPITTTASASLSLPGFDDDGEAQLIRDVRRRLGASSGDGAGGRASGSVSD
SAVAAGGRGVEMEQDEADWVWGLLFSGPGTPGLVVDLWSPGPIFLRHVEE
FGDTGCMEAAYALGLWRAGSSFQVVQGARLTPTAAVPPPLQSHDYSRDRR
AFTSDQEERLFRVPGGACLRSEAVASTASIYSAFLRQVENVYRRPWSRRT
GRTYQDRGGRTTNGRQAPGDNDKI*
back to top

mRNA from alignment at Ecto-sp13_S_contig15:19119..31445+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15.3784.1 ID=mRNA_Ecto-sp13_S_contig15.3784.1|Name=mRNA_Ecto-sp13_S_contig15.3784.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=12327bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15:19119..31445+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTTTCATCGCCACGCGGAGAAACAGGACTAGCCGAGACAGGATCAGC GCCCAGTCCTTTTGCAGGTGGTGATCGTCACGAGGAGCATGCGCCGGCCT CTGCGGACGGGATATACGCGGTTGATGAGAAGAAACAAGAGAACCAGCAC CAGCACCAGAAACTAGTGCAACCGCAGCAGCCTGGTCGGCGCCCCAGCGC AAGCGAAAGCAACGGTAATGGTAGGAGCTACTGGAGGCGGTTCAAGGTGA TCGGGTGTATGGTGGGAGGAGCGTTGATCATCGACCTCTACTTGGCATTT TTGGGCAGCAGGTCGGAAGGGGTACCTTCGACCCGGGGAGAATCTTTTCT GGCCAGCAGCTCGGCAGTGTCTTCGTCCGACCAGCACAGCAAAGACGGAA GCCGCATCCTCCAGTTTCCGTCCCGCACAGCTGCCTTGGATGACGAAAAC ATGGGTATCCGCAGGCGGTCCATCCCAAATCTTGTCGTCGCCAACGGAAA CATGCCGTACTTCGACGAAAACGGCGTTCCAGAGACGGGCACAGAGCGTG CACTGCCCTCAGCGGGCATCAAACAACAAACAGGGCAGGCAACAGTCATG GTTGCTGGAGAACATGATGTCGAACTGCTCCACAATCGTACTTCTGCGGT TGCCAGCCCTAGCGAATATTGGATCACTGGGATAGACCCGTGGGGGGCGC AAGCACCGCCACAACCTACCCAACCAGACCAATTCAATGGGCAGAAAGTG GCAGTTGTGGTACCGTACGTCGGGAAAGACCTGCCCGTGTGGTGGGATGC TTTCGCGGAGCAGGCTAGGCTCAACGATGGACTCGTCGACTGGGTTATAT TCTGCGACCAGGCGAGTAATTCACAAAAAAGAACACTCTCCGTCTTCGCA CACTTAGAAGCTTCACAGACACGTCAGCCCTCGGCGTGATACTGAGTACG AAGACAGGGTTTCAACAGAGCTCGCTCCTACGGTAGCACTCAGTTTGGTA CGTGTGGTGATTTGAGTTGTCCTCTTAGAGGAGAAGGGTGGGGTACGCAC CGCTCCACACTCACCGATTTCGTTGTTGGCTGCGTCATACGCTACTGCGG GAGTACGATATTAGTAGTTTTGCCTTGTCTCTCATCGTAGCTCGTAACTT TTCATATATCAGCGTATTTGTAAGGAACCCGAAGCGTTCACGCGAGCCAA TGCGTCCAAACGAATCACCTTTCACTTCTCCGTCCGTCTCACGATGTTGA AGGACCTACACGCGTATGTATCAAACGTTATTGTTGTGGAAACTTGGCGT CTTGAGTCTATTCACACCGAATCTTGGGGTCCACCCTACCTACGTATACC ACGGCGCAGCTCCTACCACCGCCCATCCCTGCAGAATTCACACACATCCA CCCATGGGTAACATTGTCTACAAGCTCCACAGGTGTCACGTCACAAGAAA TACGGACGCAACCGTGTTGCAGTCACTATTCTCGACTGACCTGAGAAAGA GGTTGTCGCTACCGACAAATCCTGAAACCATTGCTCCCCGGTACTTTAAT AAGAGTGGCGGCGTTTCGCTGCCACTCTGCAGGGTTCGGTAGCTCTTGCC ACAATCACCGCAAGTGTATTACTCACGCATTCCACATGTCTCCCTGCCCC CCCGCAAACACTTGGAAAACCAGAAACTGGTGAGAAAGCGAAGTCCCCCG AACATCAAGTTCTTCCCCATGACCACGAGACGCATGGCGTGGCTACTAGC TGGGGTAGTTGAGCCAGACGACCCCTCACCCGTTCACGGTGGTGACCGCA GGGATGGTTTGGAAAGTGGCGATGGCGACGGCGATAAATCGGATGGCGAT GTAGAAAGTGTCCCAGAAACCCACGCCGAGATCGAGGTGCAGGAAAATGA CGGAAACGAGGGGAAAGATAGCGACGTAGAAGCGGCGGTCACAAGTCGTG TCTGGGAAGAACCTATCACGGAAGCGTTGGCGAAGAACGCCGTCAAGCGA AAGAGGGCTGCCTCGCTCTTGCACCAGCTGTTGATAACGGTGAGGACCCG GTGTTCGTGTGCCATCGTGGTAGTCTGGGGTACAGTGTTGCAGGTGCACT CTGTTTTCGGTGGGTTTGGCCACTGCTTATTGGTGGCACTCTCTTGCGGA GCACATCAAGCCCCACCGACCGGCTCTGCATCTGCCGCATCGCCGTGCTT GGTTGTGAAGGAACATTCCATTGTCGCGGCCTACCACAAGGCAAAACTCA GAAAAAAGTGGGTCAGTTGGTATCGTTGTTCCCTTGCAACCCTCCAGATT GCTTGTTCGAATCTCTCTGAAGCGACAAAATCTCAATTTCATGTAAGGTT GAACATCCATCGTCGTGAGCAAAAAATCTAAATGAGAACAAGAAGGGTCA ACCCCCTTTTCGCGTAAGAAATGAAGGGGCAGGGACCGCAGGGGAATAGT TTGAGAAACCCAACAACTCTAGCGTTTACCTTCCCGATTGCCATGCGTGA CTCCGGCTGGTGCGATAATCACATGACGGCAGACAGAGACAGGCACCCAG ACTACATGGAACGAAAACACAGGGTATTGAACGTGGCCCGTGGTTCTTGT GGCCTAAACGATGCTCTCGACGTCTACATGTACGCGTGATGTGACACGTG AAGTCGCCGTCTTCATCGTGGAGTACAGGCTAGTGTTAGGGTGGAGCTCC CGGAACCTACCTCAGAGAGTGCTTCCACCATCCTTTGCAGAGAACCAGAG AAAAAACTATAGTGACCGAAGCTCGAACCCCGTCCATCGCCGCGTGGGTA TGCTGTTTTTGTGCCGCCCGTTCAGTCGCCGTACTTCATCGTGGAGTTCA AGCCAGCGTTCGGCTGGCTCTTCCGGGAGTACCTGGCGGAATACTCCCAC TGGGCGTTCGGGGACCTCGATGTGCTTTTCGGCGACATGCGTAGGGGTTG GCTGGAGCCCACGGAGCTACAAGACTTCGACATAATCACCTTCAGGTTCG TAATTCCTCGTAGAAGACTTGGGGAGGGTCCATCGCCTGGCGTTAAGCAG TTGCGAAGCGCCTTCGATGAGATGGGAACCCCTCGACTGTTGTTCTGTGG TAGCACCAGGGAGCGATACCTAAGGAACCGGCTGAGGGTGCGTTGTCTGT TTTTTTCACCTCCTTTGCATCGACTAGACTCGACGCCTTTTGTAGTGATG GAAACGGCAACCACGACACCACCAACCACAACGCCGGAAGATGCATCAAC ATTAGCAACAGCATGACTAGGACACCCACACCATCTCTGTATGGTTCGAA GCCACGGCCCAGCCATTGCAAGTTTGTCTTTTCCGTGCATGCAGAAGAGA CTTTCGTACGCCATACCAAACACGCATTACATTCAAATGTACACCATGCA ACCTGCCGCAGTTTCGGCGACCAGTACAGGGCTTACCTGAGGGGCCAGCT GACCATCCACAAGAACAAGTTCGACGTAAACCGCGTATGGACGAGGTGCT CGCACCTCACCAACTACTCGGAACGGCTAGAGGTAAAAAAGCTTCGAGTT CTGTCGGCTGCGAATTTCTCGCCTGGCACGTGTGTAAACCTGCACCAAAC GACATGGGAACTGGTAGATCGTGCGGCCATAACTACCAACTGGTGTCGAA CCAGTATCCCCTCGCAATGATAAATACTGCTTACAACGGCTCCAACGGGT TGCCTACTTGTGATTCGTTTACTTCGTCAACAGAATGTCAAGTGGAAGAG CTTTCCTTCTTGCCTGTGGTACTTTCTTTTCCTGCGCCTTCCCTTTGGAA ATGCAACTCAACACGATGTATCTTGTATTCGTGTCTGGTGGGATCGAACG CGCTTCTGGAGTGCTTGTTCTTGGCCGCCGCTCTAAGTGATCTCCAACTC CTTTGCAATGCACTGATCAGGCGTTTCGGGTGAACCACGGGCTGCCCTTG GAAAGCGCGGAGGGGTGCTATAGCCTCGCCGCCGCCTCGGACCCGTCTCT CAGGATCAAGTTTACCGTCAAAGTAATGCGTAACTGTAGGAATGTAGAAG GGTGTAGGGGGTCGGTTATGGTGCAGGGTACGGGGTACTCGCCGTGGCGG ACATGAGCTATCACGTCCTCTAGACCGGTTTTCAATGCTCGATTTCTCCT CAGCAGAAAGAGAGTGACGGTGCCGAAAATGACATTCTTGGAAGGGTCTT GTCGAGAGCATTCTGAAAACGAGTCACCCGGGTTGCAAATCGTCTTCGTC GTGGAGTAACCGAGCCTTGACAATTGGCCCCGGGGATAGCCCGCACTGTG TTACCTACGCCATACATTGAATTTGTTGAGTGAACAAGGATCTCAAAGTG TGACATTCTTACCTTGCGTTTTCTACGCGTGTCACTGGCTGTGGCGTGCG CAACACGAGGGTGAACATGAGTCTTTCTTGAGGCTTGCGCATAAGCGTGA GGAATGCAGTGCCTTGTACGTTTTGTTGTCTCCCAAAAGGTTTGGCTCAT TCGGATTCGGCGAGGATGATGAAACAAGACAGCGTTTAGACCGCCCACAA AGACCATTGCAGCCAACAGAAACGTTTTTCCTTGTCGCCGACTTTCCGCT GGATACAGGCATTGTCGGATGTGGATCAAGAAGACGAAGAGGCTGTTGCG CTAAAAAGAGGGCGAGAGGTCATCATTGATGGGCATGGCCTTGTCACGCT CTGCCCAGACCTTGAATATTACTACAACGAGCCGCCCGGGGCAGGGGCGG GTACCAACTACGGGGCGTCTGACGCGGACGGCGGCGGCAACGGCGAAAGC CAAGGGGGCTTGTCACCGAGCATGCAGGTGAGGTAAAGGAAGAGAGAGAG GGAGAAAATGAGTGACATGCGAGACTGAAGTTGCGTTGTATACCGTGTTG CTGTGCCGGGAATATCTTGTTGCGAAAGTGTCAGGACATTGTTGACGATT TCATCTATTCCGGTGTCGGTGAGGCGACCGAGTAACGGTATCCCAGGACC GCTGATTCATCATGCATGTAGTGAGGTCACGAAAAATCCTTGGTGTTTGA CGACGCACAATATAACACAATCCCAAACGTACGACCCCGCCACAGGATGC GGTGGGCCCAATGACCTCTGTTGAGAAAGCCACGGGAAGATGTGAACACT GGATAAAGCCTGAGCACCAGACGTGTGTCAAGGACGTGGGTGGGAGCCAA ACGCTGTTTCTCATTGGCGGGAAGTACTACAAGCAGGGTGAGAAGACAAC GCAGGAGGATCAAACTTAGGCGGTTCAGTACACGACCTTTACGCCCCTGG GCGCGCTTGTTGTTCCGAAGTATTAGTCGATTTCTCCTGTGCATGGAGCA GATAAAACAGGCCGAACGAGATACAAATGAATCCTTCATGTTGCGTGGGG TCGTCGCACGTTCCGCAGCCGTTAGCTGATGGAGGCGTCAACGCTCGGTC GTCGGTGTTTCTTTTTGCCTGGCTTCACAACTAAATTTCGACCCGTCGTG TTTCGCAGAATTCATAAATACTGCGCAATCCACTGGGGGGAGAGAATGTC GGGCAGGCGCCTTCTACCATTTTCAGGCAAGGTTGGATATTCAACTAAGG GTTGAAAAATGCAACACGAAAAAGTTCGCTGAAGTAGTACAGCCTTGGGA ATTCGAGAACGTAGTAGCAAACCTTTGGATTGTTACAGAATAGTACGAAC GGGTATGTTGAATTCGAGGCACACCATAAAGACTTTCTCGCTTTTGGTTG GGGACGTGCTCGTAGTTGCGTACCCTCTTTGGGCCGCTTCGTAAAGACTA TCAACCTCAGCCGTGGGTATGATAATGTTGCTTCTGACAAGAAATGTATT CAAATCCTATCAGAGTGATACTCGCCCCGCGAAGACGTTATACCTGCCCT ACGGGTACAAAATATGTTTCATAGGCACTTAGGTATCTGGATGGCTTTGA AGTGAACGGATGGCTCATCCAATGCGCAGCAAATGTTTCGAAACAATGAT CGCCGCCTGGATCACGTACAAACTGTAGCGTCACACTTCAGAAAGCGCGC GTGTTCAAAAGCACGCGCATGTTCATCGCACACGTCGGAAGATCCCTATT GGGCACATACATACACGTTTCCTCCCGAGGTCAACTAACTGAACATTGTG AACAATAAGTTCTCTGTTCCATGCAGATGAAAGACGACAACCCCATCGTG TACTCTCCCCCTCTAATAGTGGAGTTGGCGAAACCACTACAGCACGACCT GAGGGCCACGGCCGGGTACCCCAATGACCACACCCCTGTACTTAGAAATC GTGTGACCCCTTCTTCCCTTCTTCCTGTCTTCCCTTCCGGCCGTGACAGG AGCACAAGCGCTCGTACAGGAGCTGGAACTCTCGCCCCCCCATCTATCCG GCCCATTTCGGCATTTCGGCGGGGCCGGGGGGCATCGTCCCGCTCCCAGC CGGAGGCTGGCGAGAGCGGGCATCCGGTCCAGGAATTAGGCCACCCCCGG TAAGGCCGTGCAGCGAATTCTCTTCTTCATACCAGTAGTAATTGGACCAT CGGATTGTGATAAATACCATACAGAAGTGTTTCAAGCGCTCGAGGTGTAC TGCAGTCGCCAAAGCTACTTAGGTCTATTCTTCCCTCGGCGCCAACTTGG CACGGTCACCCGTGCAAACAGAGATAGAATAAAACATTCGATACCTGGGA AACACGGAGCGGCAGTCGTCCACAACAACCTGCTGTAGTCCAATCCTCCC CCTTTCGCCCCAAAGCTTCGAACCGAAGCGAGTGTGTTTGTTGCCTTCAG CTGAAACCAAGCGCAGTCCGTTGCAACCCTCCATCACACCACGTTGGCAT GCATCTCGATTTCTAACCGCAGCACACACGACCGAAAACTCAGGAACACA CGGGGAGAGTGAAACACTATTGCCTGGGGTGGACAGAGCGACGGCAGTCT CGCACGACAGAGAGCGGGCGCCCGGAGCAGACGTGCGCTGTCATGGTTTC AAGCGAAGAGGTAGTCTACAAACGGCACAGTTTGGGGCGCGTTTTGCACC CTTAGTGCTTTCGGCGGTGGATTTGCGGAAGAAGAGCTTCTAAAGCTCGT CCTACGGCGATGGCACAATCAACAGGACGTTGGGTAGTGCAGAGAAAATA GCGTTTCAAGCTACTGCGGGCCTTGGGTTTTTACATGTGACTGTCGGTTC TGGTAGGTAGGAGTCGATGGGATTCCTTACAATCAGCACGAAGCGGTAGG ATACAAACCGAGGGTATGGAGTGGACATGCCATCAACACATATGGAGTGG ACATGCCATTGATCCCACGCGCTTTAATTGTTTCGGCTTTCTTTCTCGTC GGCAACAGCTTTTTGCAGCAAACCTCCGTGCTTTAATGGCTTACCGCTCC GCATCTCGACCACCTTCAGGTTGTCGTCGTCTTGGATACGAGGAATGCCT CAGGGAGAGAGGAGCGCCAGGGCCGAACAGACGCCTTCCATGCGAATGCG GTGACCCTGGGGTTGGTGGGCGGTCCTGCAGATCTGGAGGCGTTACTGCT CGAAGCAGCGCAGTGGGACGGCCCTAAGGTGCTTCAGGACTCCTTCATCA CATTGTCTAGACATATCACGCATTGAAACATATGACAAATTCTCCGCGTG TGAGGACGTGGAGAGCTGACGAACATCTGAACAGCGGGCTTGTTCGTGAA GAGGCAGACTAGCACCAACAATATGACTGCATCGTGTTCAAGGGGGGTAC AGTTTTGCTCAGTCCCGATTTCGTGTCATATGTACCCTCGCTTCAACCTT CAACACGCAACGTCAGCCACCGGCCTGCTGGTTGACCGCTTCGCGTTCTG CCTGTCGAATCTAAAAATTGCAGTGTAAGACCAAACATTTTACAACCAAG CCGTTGACCCAACACTCTCACACGCTTGCAAGATCATCGCGATGGTCTTT GACGACGACGACCTGGCCGCGACCCGAGAAATGGATGCCCTGAAGGGTGC CAAGTACATCAGGGGAGGGGTCTTGATCGTCGCCCTAGCGCGGCCGCCGC CCAGCCCAGACGTTCCCAGGATGATCGCCAGCTTCCCCAGGAAAGCCCTC ATGAACCTCGTGACGGACCTCTGCGAGACCAGGTACTGCAAGGTTTTATC CATTTCGAAATAACTTCAAGATGCGTTGTTCGTGTTGCCTTGGGGTCACA CACCCGGAAAGACGTATCCGAACATGTATCTTTCCACTGCCGAGGGCGTA AGCTGACTTCGTCATTAGCTGGCCAATTGTGTGCAATGTAAACACGAACG CGACTACATGTAGTACCGTCGCGGTTCTCGTGGTTTAACCGCGCATACAC GATGCGCCAGTACTCCCGACAACGGGGTTGTGCACACGTGAAGAAGAGAC AATTGCGCTGCTTTCAAGAAAGGGTACTCATCGCAAGCAGCCACGTTGGT GGCGTTCCCTTTGATATTGCCTACACGGCTCGATACAATCCCGGCGTATG CCGTACCCTACCCAGCAATAGACGCGATTTCCTTCGGCAGTATTGCGCTA AAGGCGTCCACCCAAAGTGGCAAGATCAGGACCAGTGAATAACGAATGAC TGTCAAACTCAACCAGGACCCCCCCCTCCCTCCCCCGTGCTGCACCTCCC CCGCCAACACTACAGGTACCTTCTTGCCCTTCCCGCGTCTGCACGCCTAA GCCCTCGCGCCTCCCAAGCAGTATCCGCCCAGCTCCGCAGCATCCGGCGG CCACCCTACCCTGTCCGGCAAAGCCAAGACAGCCGTCCTCCGTCGAAGAG AAACAGCGCTGGTACTGGCGGCCCTCGAGCCCCTCGTCGATCGCCCGACA CCCTTGGCCCAATCACGCTGGTGGTACCGTTCGAAACGGCAGGAGAAGCG CCGCAATTTCTGGAGGAGCGCGAGGCCGGGACTTCGGCTTCTTACGCCTG GAGCTTGGATTCTCCCCCCGCTGGCAGTGGCGACATCAGCAATCCCAGCA ACAAAGTCGCCTTGCCGGGGATGGGATCGGTCTCCTCGACCGTCGCGAAT GATGGTGCTGCTGAGGATGCTGCGCGGGCGACTAGTCTTGCTTCGGGACA TACTGGCGTTGCCCCTGGCTCTGCGCCAACAGCGAGAGGGGCGATCGAGT CTGCGGAAAAATCGGCGGCGGCCGCAGGCCAAGCAGAGGTGGAAGATTTT GCCGCGGCCAGTGCCGGCGGTTGGGGAAATGGTTTCGGTATAACTTCGTT CCGCGACACGGGCGGCGACGAAACAAGCACCAGAACGAGGAGCTACTCCA CAGCTCTTGGTCGTGACGCAGTCGGCAGTGGACTGAGGGACCGGGGGGGG GGAATGTTGCCCGTCGAAGAAGAAGGCGGAACGACACGTTCGGCTGGTCC TGGCGCAGGTGCTGGAAGACAAAGAGCGTCGACACCGCTAAAGATATCCT TCCTGGCCCCGGCTGGGAGGGCACCAGCAAGCAACGGATCTGTCACAGGT AGAGATACGAGGACGTTGAGCAGGCACAACGTCCGTCGCCAGGGCCCCGC CGTAGACTCCCCGCGGCCCGCCAGTGTGACGCAGTGGCGAGCGGAGCAGC AGCGGCGTGGACCGCCAGCATCCACGTCCATGGGCGGCGACCGAGCGGGG CTCGGCCGGGGGGGGTGGGAAGGAGGCCCAGATGTCCCCATCACCACCAC CGCCTCCGCTTCCCTATCTCTCCCTGGGTTTGATGACGACGGGGAGGCAC AATTGATCAGGGACGTCAGGCGGAGACTGGGCGCTAGTTCCGGAGACGGG GCTGGAGGTCGGGCTAGCGGAAGCGTGAGCGATTCCGCAGTAGCGGCGGG GGGGCGGGGGGTCGAAATGGAGCAAGACGAGGCCGACTGGGTCTGGGGGC TGCTGTTCTCTGGCCCGGGTACGCCGGGGCTAGTGGTGGATTTGTGGTCT CCTGGGCCTATCTTTCTCCGACACGTGGAGGTACGCTGAACGAATGGCCC CCCATCACATTTGGTGCACTAACACAAGTACGTTCGGGGTTATTCTTTTT ACCACGATTTGCCTTTTTCAATTTGAGGTGAAGCATGCATCCTGGCTGTC ACCGTCAGAAACGAACGGCTGGAGTGCTTTTTTGGGACAACCACACATTC GAACAGACTTGGAAGCGATGTAATGTTTTGTGAGATCAGGTATACTTGGC GAAAGTGCGGGATTCTCGGAAAACAGGTTGGAAATCCTGCCGGGTCGGAA ATCGCCTGAGTGTAGGTATTTCTCTGAGGAGGATGAGTGTCTTCCTTTTC GAACAACGGTTCCGATAGGTCACGCAAGGTGTTGCTATCCCTCTTCGAGA TTATAGGGTTGCGTTTAGGTTGTAGGACGTGCCACGGTACCAAGCGACTG GGGCATATCACAAGAAACGCTCACAATTGGGCAAAAGCACGCACAGAGAC AAGATACTGCAGAGAGATGAACGAATGGCGCGCCAGGTGAATGAAGCAGC GAGGTGGAGTTCCGCCGAACACCTAAGTTAGAACACCATGAAAATTCAAT CGAACAACAAATTTTAATCGCCGAAACGAACACGTTATCCACCGGGAACC AGGAATTCGGAGATACCGGTTGCATGGAGGCTGCTTACGCCCTCGGCCTG TGGAGAGCTGGCAGCAGCTTTCAGGTGGTGCAAGGAGCAAGGCTGACACC CACAGCCGCCGTTCCGCCCCCGCTCCAGGTGAAAGCAAGCAGATAGAAGC TGGGGTTTCATATGCGTATGCTCTATGTGTGTGGTTTTTTTATCGCGCTG TTTGTTCTCACTCTCCAAGGCAAAAGGGGCTCGCACGCAAGCTCGTTGTC CTCACAGGTGTGGGAACACGCTACGAAGTGTAGTGATACAAGAAGGCTAA CATATTCCTCACGTACCATCGTAATCTGCTTTGGGATGCCTCCGGACAGA GCCACGACTACAGCAGAGACAGGCGAGCGTTCACGTCAGACCAGGAAGAG CGTTTGTTCCGTGTCCCAGGGGGTGCATGTCTAAGGAGCGAAGCCGTGGC GAGCACGGCGTCCATTTACTCCGCGTTCCTTCGACAGGTGGGGTACGACT ACGCCAGCCTTCTCCTCATTGGCCATCTTAGCTTTGGAGTTTCTTGCTCA ACCATTTCCAGATTCCCTGCTTGGTGCTTTCTCTTCACCTTGATCCTATA CACGACAGAAGTCTTGTCGTGGATCCCGTGTGCTTCGTGATTCCCCGGTG CACTTTTTCGGCTTCTCCCACTTTTCTTGTGATTTTCGTTTCCTTGCACA ACCCGCCAAAACTTTGGTCACCTGTCCCCCGTAGGACCCATACAAGTACA GAGAGACAAGGAGACTGAACACGACAGGTTGGACTGCTCCATTAAAAGTG GAAACTACAAAGGCTCTCGGCAAAGGCTCTCGAAGAAGGCTCTCGACAAT GGCTCTCGCCCACTTGCCCATCCACAGCCCCAACCCACACACAACCGCAT CACCACCCAACGTCCACCGCCGCCTTACCGGTACTCCACCCAGGTCGCAA CGCACTCAACACTTCCCCCCTCGAATGTTTCAGGTGGAGAACGTGTACCG ACGCCCTTGGTCAAGAAGGACCGGGCGCACCTACCAGGATCGTGGGGGTC GAACAACCAATGGTCGGCAGGCGCCAGGCGACAACGATAAAATATGACAG TTACAAAGATGTGTAAATGTTTCGTTCTGGGTCGTTTAGGTTCGCTGGGC CCTTCGAGTCACAAGCACGTCAGCTGTGTGGGTTTTGACCTTAGGAAACT TCATACTTTGGCTGGCAGCCAGCTGTGGGTTGGTCCTACTCTCTGCTTTT ATTCCTGCTGTTACTTTCATCTTGCATCACCCCTTTTGATGACACTGTGC TCTCATGAGCCCACTCCGAATGGATTATTTGCGTCCTTTCACGAATCTGT ATATTGCTCTTGTATATTTCGGGCGAACCCTGTTCTTGTTGAATGACTCC CAACGCTTGTTTGCAGTATCTAGGGTGTTTGCGGCAAGGGTTCTTCTTCC CTCGCTGCGTTGGTTGTATCTAGCGTTAGGTGTTTCCATCGTCATTGCAG GGCAATTCAAGACTGTGTGGACACCTCTACCAAGCAGCACAACTTCTCGG ATCTCACGTTGGACCGAGCTTTTTTGGGGTAGCTGACATGCAGGCACTTC CGCACGATGTTCACACCAACTGTATGCTGCGTTGATTTGTCCTTCCGGAC ACGGATAAGGCGTTGTTGTGCAGCTTAAGCCATCCCGGAACACGAAGGAT CCCAAGTAATGCGCGAGGCTCTTAGGG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15:19119..31445+

>mRNA_Ecto-sp13_S_contig15.3784.1 ID=mRNA_Ecto-sp13_S_contig15.3784.1|Name=mRNA_Ecto-sp13_S_contig15.3784.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=4425bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15:19119..31445+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTTTCATCGCCACGCGGAGAAACAGGACTAGCCGAGACAGGATCAGC
GCCCAGTCCTTTTGCAGGTGGTGATCGTCACGAGGAGCATGCGCCGGCCT
CTGCGGACGGGATATACGCGGTTGATGAGAAGAAACAAGAGAACCAGCAC
CAGCACCAGAAACTAGTGCAACCGCAGCAGCCTGGTCGGCGCCCCAGCGC
AAGCGAAAGCAACGGTAATGGTAGGAGCTACTGGAGGCGGTTCAAGGTGA
TCGGGTGTATGGTGGGAGGAGCGTTGATCATCGACCTCTACTTGGCATTT
TTGGGCAGCAGGTCGGAAGGGGTACCTTCGACCCGGGGAGAATCTTTTCT
GGCCAGCAGCTCGGCAGTGTCTTCGTCCGACCAGCACAGCAAAGACGGAA
GCCGCATCCTCCAGTTTCCGTCCCGCACAGCTGCCTTGGATGACGAAAAC
ATGGGTATCCGCAGGCGGTCCATCCCAAATCTTGTCGTCGCCAACGGAAA
CATGCCGTACTTCGACGAAAACGGCGTTCCAGAGACGGGCACAGAGCGTG
CACTGCCCTCAGCGGGCATCAAACAACAAACAGGGCAGGCAACAGTCATG
GTTGCTGGAGAACATGATGTCGAACTGCTCCACAATCGTACTTCTGCGGT
TGCCAGCCCTAGCGAATATTGGATCACTGGGATAGACCCGTGGGGGGCGC
AAGCACCGCCACAACCTACCCAACCAGACCAATTCAATGGGCAGAAAGTG
GCAGTTGTGGTACCGTACGTCGGGAAAGACCTGCCCGTGTGGTGGGATGC
TTTCGCGGAGCAGGCTAGGCTCAACGATGGACTCGTCGACTGGGTTATAT
TCTGCGACCAGGCGAGTAATTCACAAAAAAGAACACTCTCCAAACTGGTG
AGAAAGCGAAGTCCCCCGAACATCAAGTTCTTCCCCATGACCACGAGACG
CATGGCGTGGCTACTAGCTGGGGTAGTTGAGCCAGACGACCCCTCACCCG
TTCACGGTGGTGACCGCAGGGATGGTTTGGAAAGTGGCGATGGCGACGGC
GATAAATCGGATGGCGATGTAGAAAGTGTCCCAGAAACCCACGCCGAGAT
CGAGGTGCAGGAAAATGACGGAAACGAGGGGAAAGATAGCGACGTAGAAG
CGGCGGTCACAAGTCGTGTCTGGGAAGAACCTATCACGGAAGCGTTGGCG
AAGAACGCCGTCAAGCGAAAGAGGGCTGCCTCGCTCTTGCACCAGCTGTT
GATAACGTCGCCGTACTTCATCGTGGAGTTCAAGCCAGCGTTCGGCTGGC
TCTTCCGGGAGTACCTGGCGGAATACTCCCACTGGGCGTTCGGGGACCTC
GATGTGCTTTTCGGCGACATGCGTAGGGGTTGGCTGGAGCCCACGGAGCT
ACAAGACTTCGACATAATCACCTTCAGTTTCGGCGACCAGTACAGGGCTT
ACCTGAGGGGCCAGCTGACCATCCACAAGAACAAGTTCGACGTAAACCGC
GTATGGACGAGGTGCTCGCACCTCACCAACTACTCGGAACGGCTAGAGGC
GTTTCGGGTGAACCACGGGCTGCCCTTGGAAAGCGCGGAGGGGTGCTATA
GCCTCGCCGCCGCCTCGGACCCGTCTCTCAGGATCAAGTTTACCGTCAAA
GCATTGTCGGATGTGGATCAAGAAGACGAAGAGGCTGTTGCGCTAAAAAG
AGGGCGAGAGGTCATCATTGATGGGCATGGCCTTGTCACGCTCTGCCCAG
ACCTTGAATATTACTACAACGAGCCGCCCGGGGCAGGGGCGGGTACCAAC
TACGGGGCGTCTGACGCGGACGGCGGCGGCAACGGCGAAAGCCAAGGGGG
CTTGTCACCGAGCATGCAGGATGCGGTGGGCCCAATGACCTCTGTTGAGA
AAGCCACGGGAAGATGTGAACACTGGATAAAGCCTGAGCACCAGACGTGT
GTCAAGGACGTGGGTGGGAGCCAAACGCTGTTTCTCATTGGCGGGAAGTA
CTACAAGCAGGAATTCATAAATACTGCGCAATCCACTGGGGGGAGAGAAT
GTCGGGCAGGCGCCTTCTACCATTTTCAGGCAAGGTTGGATATTCAACTA
AGGGAGCACAAGCGCTCGTACAGGAGCTGGAACTCTCGCCCCCCCATCTA
TCCGGCCCATTTCGGCATTTCGGCGGGGCCGGGGGGCATCGTCCCGCTCC
CAGCCGGAGGCTGGCGAGAGCGGGCATCCGGTCCAGGAATTAGGCCACCC
CCGGAACACACGGGGAGAGTGAAACACTATTGCCTGGGGTGGACAGAGCG
ACGGCAGTCTCGCACGACAGAGAGCGGGCGCCCGGAGCAGACGTGCGCTG
TCATGGTTTCAAGCGAAGAGGTAGTTGTCGTCGTCTTGGATACGAGGAAT
GCCTCAGGGAGAGAGGAGCGCCAGGGCCGAACAGACGCCTTCCATGCGAA
TGCGGTGACCCTGGGGTTGGTGGGCGGTCCTGCAGATCTGGAGGCGTTAC
TGCTCGAAGCAGCGCAGTGGGACGGCCCTAAGATCATCGCGATGGTCTTT
GACGACGACGACCTGGCCGCGACCCGAGAAATGGATGCCCTGAAGGGTGC
CAAGTACATCAGGGGAGGGGTCTTGATCGTCGCCCTAGCGCGGCCGCCGC
CCAGCCCAGACGTTCCCAGGATGATCGCCAGCTTCCCCAGGAAAGCCCTC
ATGAACCTCGTGACGGACCTCTGCGAGACCAGGTACCTTCTTGCCCTTCC
CGCGTCTGCACGCCTAAGCCCTCGCGCCTCCCAAGCAGTATCCGCCCAGC
TCCGCAGCATCCGGCGGCCACCCTACCCTGTCCGGCAAAGCCAAGACAGC
CGTCCTCCGTCGAAGAGAAACAGCGCTGGTACTGGCGGCCCTCGAGCCCC
TCGTCGATCGCCCGACACCCTTGGCCCAATCACGCTGGTGGTACCGTTCG
AAACGGCAGGAGAAGCGCCGCAATTTCTGGAGGAGCGCGAGGCCGGGACT
TCGGCTTCTTACGCCTGGAGCTTGGATTCTCCCCCCGCTGGCAGTGGCGA
CATCAGCAATCCCAGCAACAAAGTCGCCTTGCCGGGGATGGGATCGGTCT
CCTCGACCGTCGCGAATGATGGTGCTGCTGAGGATGCTGCGCGGGCGACT
AGTCTTGCTTCGGGACATACTGGCGTTGCCCCTGGCTCTGCGCCAACAGC
GAGAGGGGCGATCGAGTCTGCGGAAAAATCGGCGGCGGCCGCAGGCCAAG
CAGAGGTGGAAGATTTTGCCGCGGCCAGTGCCGGCGGTTGGGGAAATGGT
TTCGGTATAACTTCGTTCCGCGACACGGGCGGCGACGAAACAAGCACCAG
AACGAGGAGCTACTCCACAGCTCTTGGTCGTGACGCAGTCGGCAGTGGAC
TGAGGGACCGGGGGGGGGGAATGTTGCCCGTCGAAGAAGAAGGCGGAACG
ACACGTTCGGCTGGTCCTGGCGCAGGTGCTGGAAGACAAAGAGCGTCGAC
ACCGCTAAAGATATCCTTCCTGGCCCCGGCTGGGAGGGCACCAGCAAGCA
ACGGATCTGTCACAGGTAGAGATACGAGGACGTTGAGCAGGCACAACGTC
CGTCGCCAGGGCCCCGCCGTAGACTCCCCGCGGCCCGCCAGTGTGACGCA
GTGGCGAGCGGAGCAGCAGCGGCGTGGACCGCCAGCATCCACGTCCATGG
GCGGCGACCGAGCGGGGCTCGGCCGGGGGGGGTGGGAAGGAGGCCCAGAT
GTCCCCATCACCACCACCGCCTCCGCTTCCCTATCTCTCCCTGGGTTTGA
TGACGACGGGGAGGCACAATTGATCAGGGACGTCAGGCGGAGACTGGGCG
CTAGTTCCGGAGACGGGGCTGGAGGTCGGGCTAGCGGAAGCGTGAGCGAT
TCCGCAGTAGCGGCGGGGGGGCGGGGGGTCGAAATGGAGCAAGACGAGGC
CGACTGGGTCTGGGGGCTGCTGTTCTCTGGCCCGGGTACGCCGGGGCTAG
TGGTGGATTTGTGGTCTCCTGGGCCTATCTTTCTCCGACACGTGGAGGAA
TTCGGAGATACCGGTTGCATGGAGGCTGCTTACGCCCTCGGCCTGTGGAG
AGCTGGCAGCAGCTTTCAGGTGGTGCAAGGAGCAAGGCTGACACCCACAG
CCGCCGTTCCGCCCCCGCTCCAGAGCCACGACTACAGCAGAGACAGGCGA
GCGTTCACGTCAGACCAGGAAGAGCGTTTGTTCCGTGTCCCAGGGGGTGC
ATGTCTAAGGAGCGAAGCCGTGGCGAGCACGGCGTCCATTTACTCCGCGT
TCCTTCGACAGGTGGAGAACGTGTACCGACGCCCTTGGTCAAGAAGGACC
GGGCGCACCTACCAGGATCGTGGGGGTCGAACAACCAATGGTCGGCAGGC
GCCAGGCGACAACGATAAAATATGA
back to top