prot_Ecto-sp13_S_contig14971.3766.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14971.3766.1
Unique Nameprot_Ecto-sp13_S_contig14971.3766.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length136
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14971.3766.1 vs. uniprot
Match: D7G1M9_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1M9_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 4.090e-6
Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 0 
Query:    1 MLLHHCRGRGLLPGACLVPDGND 23
            MLLHHCRGRGLLPGACLVPDGN+
Sbjct:  428 MLLHHCRGRGLLPGACLVPDGNE 450
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BLAST of mRNA_Ecto-sp13_S_contig14971.3766.1 vs. uniprot
Match: A0A6H5KJ27_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ27_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 7.280e-6
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 0 
Query:    1 MLLHHCRGRGLLPGACLVPDGN 22
            MLLHHCRGRGLLPGACLVPDGN
Sbjct:  134 MLLHHCRGRGLLPGACLVPDGN 155
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14971.3766.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1M9_ECTSI4.090e-695.65SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KJ27_9PHAE7.280e-6100.00SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14971contigEcto-sp13_S_contig14971:2590..3822 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14971.3766.1mRNA_Ecto-sp13_S_contig14971.3766.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14971 654..3969 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14971.3766.1 ID=prot_Ecto-sp13_S_contig14971.3766.1|Name=mRNA_Ecto-sp13_S_contig14971.3766.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=136bp
MLLHHCRGRGLLPGACLVPDGNDPSRTRFRYWPSSRDSSRNQPHPPRMIT
SFWFIGSPSPGSTRSTMNRFQGVVWCGMDTPPVPPPPPCFPILFLAGGNF
DVIGPPWVFLRRNDREGMNMRISNPNCGFRWPFLT*
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