prot_Ecto-sp13_S_contig1493.3749.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1493.3749.1
Unique Nameprot_Ecto-sp13_S_contig1493.3749.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length119
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1493.3749.1 vs. uniprot
Match: D7FLM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLM1_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 2.060e-45
Identity = 111/118 (94.07%), Postives = 112/118 (94.92%), Query Frame = 0 
Query:    1 MEGKEPDTLNKTLKAVGSAYDMAGRLGWKFKARAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEPNRGRPKSPQSWGSSSPNGLQRSARGKKLTGDAPAPGVAVPAGSGNCVVS 118
            M GKE DTLNKTLKAVGSAYDMAGRLGWKFKARA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEP+RGRPKSPQSWGSSSPNGLQRSARGKKL GDAPAPGVAVPAGSGNCVVS
Sbjct:    1 MAGKEQDTLNKTLKAVGSAYDMAGRLGWKFKARAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEPSRGRPKSPQSWGSSSPNGLQRSARGKKLAGDAPAPGVAVPAGSGNCVVS 118
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1493.3749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLM1_ECTSI2.060e-4594.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1493contigEcto-sp13_S_contig1493:10556..11359 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1493.3749.1mRNA_Ecto-sp13_S_contig1493.3749.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1493 10556..11359 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1493.3749.1 ID=prot_Ecto-sp13_S_contig1493.3749.1|Name=mRNA_Ecto-sp13_S_contig1493.3749.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=119bp
MEGKEPDTLNKTLKAVGSAYDMAGRLGWKFKARAAGAAASSKSPARASAP
PGATDAAVAVAAAAAADEPNRGRPKSPQSWGSSSPNGLQRSARGKKLTGD
APAPGVAVPAGSGNCVVS*
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