mRNA_Ecto-sp13_S_contig14910.3738.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14910.3738.1 vs. uniprot
Match: D7FSI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSI4_ECTSI) HSP 1 Score: 85.9 bits (211), Expect = 7.840e-19 Identity = 40/44 (90.91%), Postives = 42/44 (95.45%), Query Frame = 1
Query: 1 IRPASLAIRAFNVETAAIKDSVRGNVMPGKMRIQWWKDAMAGVF 132
+RPASLAIRAFNVETAAIKDSVRGNVMPGKMR+QWWKD MA VF
Sbjct: 40 LRPASLAIRAFNVETAAIKDSVRGNVMPGKMRMQWWKDTMADVF 83
BLAST of mRNA_Ecto-sp13_S_contig14910.3738.1 vs. uniprot
Match: A0A4D9CW87_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CW87_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 1.600e-9 Identity = 24/43 (55.81%), Postives = 34/43 (79.07%), Query Frame = 1
Query: 4 RPASLAIRAFNVETAAIKDSVRGNVMPGKMRIQWWKDAMAGVF 132
R A A+RAFNVETA IKD RGN +PG+MR+QWW++ ++ ++
Sbjct: 52 RRAYFALRAFNVETALIKDVARGNTLPGQMRMQWWREVISAIY 94
BLAST of mRNA_Ecto-sp13_S_contig14910.3738.1 vs. uniprot
Match: A0A5C5FLZ8_9BASI (Uncharacterized protein (Fragment) n=1 Tax=Rhodotorula diobovata TaxID=5288 RepID=A0A5C5FLZ8_9BASI) HSP 1 Score: 53.9 bits (128), Expect = 1.770e-8 Identity = 25/44 (56.82%), Postives = 33/44 (75.00%), Query Frame = 1
Query: 1 IRPASLAIRAFNVETAAIKDSVRGNVMPGKMRIQWWKDAMAGVF 132
++PA A+RAFNVE AA+ D V N M G+MR QWWKDA+ G++
Sbjct: 21 LQPAYWALRAFNVELAALPDQV-SNQMIGRMRFQWWKDAVKGLY 63
BLAST of mRNA_Ecto-sp13_S_contig14910.3738.1 vs. uniprot
Match: A0A1Y2FS30_9BASI (Squalene/phytoene synthase n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2FS30_9BASI) HSP 1 Score: 57.4 bits (137), Expect = 2.090e-8 Identity = 28/45 (62.22%), Postives = 34/45 (75.56%), Query Frame = 1
Query: 4 RPASLAIRAFNVETAAIKDSVRGNVMPGKMRIQWWKDAMAGVFGS 138
RPA LA++AFNVE A I D+V N M G+MR QWW+DA+ GVF S
Sbjct: 49 RPAYLALKAFNVELATIDDNV-SNPMVGRMRYQWWRDAVKGVFES 92
BLAST of mRNA_Ecto-sp13_S_contig14910.3738.1 vs. uniprot
Match: A0A0H5FT96_9BASI (Uncharacterized protein (Fragment) n=1 Tax=Leucosporidium scottii TaxID=5278 RepID=A0A0H5FT96_9BASI) HSP 1 Score: 57.4 bits (137), Expect = 2.210e-8 Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 1
Query: 4 RPASLAIRAFNVETAAIKDSVRGNVMPGKMRIQWWKDAMAGVF 132
RPA LA+RAFNVE A I D+V N M G++R QWW+DA+ GVF
Sbjct: 49 RPAYLALRAFNVELATIDDNV-SNAMVGRLRYQWWRDAVKGVF 90
BLAST of mRNA_Ecto-sp13_S_contig14910.3738.1 vs. uniprot
Match: A0A0D6EMP0_SPOSA (SPOSA6832_02687-mRNA-1:cds n=1 Tax=Sporidiobolus salmonicolor TaxID=5005 RepID=A0A0D6EMP0_SPOSA) HSP 1 Score: 56.6 bits (135), Expect = 4.020e-8 Identity = 24/44 (54.55%), Postives = 34/44 (77.27%), Query Frame = 1
Query: 1 IRPASLAIRAFNVETAAIKDSVRGNVMPGKMRIQWWKDAMAGVF 132
+RPA LA++AFNVE A ++D V ++ G+MR QWW+DA+ GVF
Sbjct: 47 VRPAYLALKAFNVELAGVQDQVSNQIV-GRMRFQWWRDAIKGVF 89
BLAST of mRNA_Ecto-sp13_S_contig14910.3738.1 vs. uniprot
Match: A0A835YPK2_9STRA (Squalene/phytoene synthase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPK2_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 5.410e-8 Identity = 24/43 (55.81%), Postives = 32/43 (74.42%), Query Frame = 1
Query: 4 RPASLAIRAFNVETAAIKDSVRGNVMPGKMRIQWWKDAMAGVF 132
RP+ LA+RAFNVE A+IK++VR N G MR+QWW D + V+
Sbjct: 63 RPSLLALRAFNVEIASIKEAVRNNTRSGTMRMQWWMDVVNAVY 105
BLAST of mRNA_Ecto-sp13_S_contig14910.3738.1 vs. uniprot
Match: A0A3R7J1V0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J1V0_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 6.980e-8 Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 1
Query: 4 RPASLAIRAFNVETAAIKDSVRGNVMPGKMRIQWWKDAMAGVFGS 138
RP+ AIRA N E A IKDSV N + GK+R+QWW+D + G++ +
Sbjct: 29 RPSYFAIRALNAEVATIKDSVHSNHVTGKIRMQWWRDRIFGLYAA 73
BLAST of mRNA_Ecto-sp13_S_contig14910.3738.1 vs. uniprot
Match: A0A3F2RY73_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RY73_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 1.380e-7 Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 1
Query: 4 RPASLAIRAFNVETAAIKDSVRGNVMPGKMRIQWWKDAMAGVFGS 138
RP+ AIRA N E A IKDSV N + GK+R+QWW+D + G++ +
Sbjct: 55 RPSYFAIRALNAEVATIKDSVHSNHVTGKIRMQWWRDRIFGLYAA 99
BLAST of mRNA_Ecto-sp13_S_contig14910.3738.1 vs. uniprot
Match: A0A316ZCR7_9BASI (Uncharacterized protein n=1 Tax=Tilletiopsis washingtonensis TaxID=58919 RepID=A0A316ZCR7_9BASI) HSP 1 Score: 54.3 bits (129), Expect = 2.700e-7 Identity = 24/44 (54.55%), Postives = 33/44 (75.00%), Query Frame = 1
Query: 1 IRPASLAIRAFNVETAAIKDSVRGNVMPGKMRIQWWKDAMAGVF 132
+RP LA+RAFNVETA IKD+V + G++R+ WW+DA+ G F
Sbjct: 71 LRPHYLALRAFNVETATIKDNVSNETL-GRIRVGWWRDAVRGAF 113 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14910.3738.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14910.3738.1 >prot_Ecto-sp13_S_contig14910.3738.1 ID=prot_Ecto-sp13_S_contig14910.3738.1|Name=mRNA_Ecto-sp13_S_contig14910.3738.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=46bp IRPASLAIRAFNVETAAIKDSVRGNVMPGKMRIQWWKDAMAGVFGSback to top mRNA from alignment at Ecto-sp13_S_contig14910:4161..4298+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14910.3738.1 ID=mRNA_Ecto-sp13_S_contig14910.3738.1|Name=mRNA_Ecto-sp13_S_contig14910.3738.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=138bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14910:4161..4298+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14910:4161..4298+ >mRNA_Ecto-sp13_S_contig14910.3738.1 ID=mRNA_Ecto-sp13_S_contig14910.3738.1|Name=mRNA_Ecto-sp13_S_contig14910.3738.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=138bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14910:4161..4298+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |