mRNA_Ecto-sp13_S_contig1491.3736.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1491.3736.1 vs. uniprot
Match: A0A6H5K7E8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7E8_9PHAE) HSP 1 Score: 1599 bits (4140), Expect = 0.000e+0 Identity = 973/1046 (93.02%), Postives = 981/1046 (93.79%), Query Frame = 1
Query: 604 MHNRRVNQRRRESFDDASGVSPARIKGMHEFESKLARAERNRDKLRRERRRRAMERYEEGKARVLEQGALASSTSSSAFMGGVGGVRSGCLRAAPGSGVGGGITNTKCTNGELGRDNRRRRAAEARHAAKARQTQRMRSLRQRMLSHTSRVSERKTRLFAARLLQAWWRCVREGKSFDVAGLAISISSSSS-PGATSPQRSPLGSPTSWATAQGLGLSVPDVGCGSIVPFGDYMRNQASAASGGGPALSPPVLDPCTRSPIPTSGRFSPGVGGSKKALGAADAAVAPVIGLAGVRETAGGXXXXXXXXXXXXXXXXXXMNVTTMGYGFGSHHKAALAIQAFLRRNMHPLKVANALLAGRLSIKVLCAAVRTMSTSTFDEAIDVMSTRAIVSHCETALKALRMGREMRCVPQTVRSARAFLSALLVNFFPTSALDDEGALSSTPEGTAPLKVEKDRLVRAAGNAIQALLGLETT--------------------------TATFGAEHFPKIRRASATMVRARVAFCRRFAEWKRKDAVRLADEMTAASVDVLFMQLRAERDLHVAAVRYGIDDADDEGALFSTGFEQIKEGTQRQLGKMMHALGKLVGADEARQRMNDATNAAFERLRADELAEDEAFLAEHGAAFAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GKSGSMVMSEE-DDIAGPRRPLSAGDLLSNEWLVHEVMISGETLTVSMEEAIENQLLRSGNPAVAAGGGEDGVNAYWSKVESHVAAEDYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDDTKATLAGWGRTQDEVEGGRRRLEPAMVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQHGVEYERDRFTEKLDVGEISLDMTHLWLHRAIRQLRSAAGVAATPAXXXXXXXXXXXXXXXXXXXXXXXLAASPEVLFYRELLSDLEQRRGDAYLKLLRVAIVDNLLGSIVCVERKVGSSA 3654
MHNRRVNQRRRESFDDASGVSPARIKGMHEFESKLARAERNRDKLRRERRRRAMERYEEGKARVLEQG LA STSSSAF GGVGGVRSGCLRAAPGSGVGGGITNTK TNGELGRDNRRRRAAEAR QRMRSLRQRMLSHTS+VSERKTRLFAARLLQAWWRCVREGKSFDVAGLAISISSSSS P T PQRSPLGSPTSWATAQGLGLSVPDVGCGS+VPFGDYMRN ASAASGGGPALSPPVLDPCTRSPIPTSGRF PGVGGSKKA A DAAVAP IG G RETAGGXXXXXXXXXXXXXXX MNVTTMGYGFGSHHKAAL+IQAFLRRNMHPLKVANALLAGRLSIKVLCAAVRTMSTSTFDEAIDVMSTRAIVSHCETALKALRMGREMRCVPQTVRSARAFLSALLVNFFPTSALDDEGALSS+PEGTAPLKVEKDRLVRAAGNAIQALLGLETT TATFGAEHFPKIRRASATMVRARVAFCRRFAEWKRKDAVRLADEMTAASVDVLFMQLRA+RDLHVAAVRYGIDDADDEGALFSTGFEQIKEGTQRQLGKM+HALGKLVGADEARQRMNDAT+AAFERLRADELAEDEAFLAEHGAAFA+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GKSGSM MSEE DDIAGPRRPLSAGDLLSNEWLVHEVMISGETLTVSMEEAIENQLLRSGNPAVAAGGGEDGVNAYWS VESHVAAEDYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDDTKATLA WGRTQDEVEGGRRRLEPAMVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQHGVEYERDRFTEKLDVGE SLDMTHLWLHRAIRQLRSAAGVAATP XXXXXXXXXXXXXXXXXXXXXX AASPEV FYRELLSDLEQRRGDAYLKLLRVAIVDNLLGSIVCVERKVGSSA
Sbjct: 1 MHNRRVNQRRRESFDDASGVSPARIKGMHEFESKLARAERNRDKLRRERRRRAMERYEEGKARVLEQGGLAFSTSSSAFRGGVGGVRSGCLRAAPGSGVGGGITNTKSTNGELGRDNRRRRAAEARXXXXXXXXQRMRSLRQRMLSHTSQVSERKTRLFAARLLQAWWRCVREGKSFDVAGLAISISSSSSSPDVTPPQRSPLGSPTSWATAQGLGLSVPDVGCGSVVPFGDYMRNHASAASGGGPALSPPVLDPCTRSPIPTSGRFCPGVGGSKKASEATDAAVAPAIGRGGARETAGGXXXXXXXXXXXXXXXFSAMNVTTMGYGFGSHHKAALSIQAFLRRNMHPLKVANALLAGRLSIKVLCAAVRTMSTSTFDEAIDVMSTRAIVSHCETALKALRMGREMRCVPQTVRSARAFLSALLVNFFPTSALDDEGALSSSPEGTAPLKVEKDRLVRAAGNAIQALLGLETTMDAAXXXXXXXXXXXXXXXTEKAATATATFGAEHFPKIRRASATMVRARVAFCRRFAEWKRKDAVRLADEMTAASVDVLFMQLRAQRDLHVAAVRYGIDDADDEGALFSTGFEQIKEGTQRQLGKMLHALGKLVGADEARQRMNDATDAAFERLRADELAEDEAFLAEHGAAFADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKSGSMAMSEEEDDIAGPRRPLSAGDLLSNEWLVHEVMISGETLTVSMEEAIENQLLRSGNPAVAAGGGEDGVNAYWSTVESHVAAEDYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDDTKATLAEWGRTQDEVEGGRRRLEPAMVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQHGVEYERDRFTEKLDVGETSLDMTHLWLHRAIRQLRSAAGVAATPTAXXXXXXXXXXXXXXXXXXXXXXXAASPEVRFYRELLSDLEQRRGDAYLKLLRVAIVDNLLGSIVCVERKVGSSA 1046
BLAST of mRNA_Ecto-sp13_S_contig1491.3736.1 vs. uniprot
Match: D8LHM9_ECTSI (T-complex 11 (Mouse) like 2, isoform CRA_a (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHM9_ECTSI) HSP 1 Score: 1496 bits (3874), Expect = 0.000e+0 Identity = 892/973 (91.68%), Postives = 898/973 (92.29%), Query Frame = 1
Query: 604 MHNRRVNQRRRESFDDASGVSPARIKGMHEFESKLARAERNRDKLRRERRRRAMERYEEGKARVLEQGALASSTSSSAFMGGVGGVRSGCLRAAPGSGVGGGITNTKCTNGELGRDNRRRRAAEARHAAKARQTQRMRSLRQRMLSHTSRVSERKTRLFAARLLQAWWRCVREGKSFDVAGLAISISSSSSPGATSPQRSPLGSPTSWATAQGLGLSVPDVGCGSIVPFGDYMRNQASAASGGGPALSPPVLDPCTRSPIPTSGRFSPGVGGSKKALGAADAAVAPVIGLAGVRETAGGXXXXXXXXXXXXXXXXXXMNVTTMGYGFGSHHKAALAIQAFLRRNMHPLKVANALLAGRLSIKVLCAAVRTMSTSTFDEAIDVMSTRAIVSHCETALKALRMGREMRCVPQTVRSARAFLSALLVNFFPTSALDDEGALSSTPEGTAPLKVEKDRLVRAAGNAIQALLGLETTT-------------------------------ATFGAEHFPKIRRASATMVRARVAFCRRFAEWKRKDAVRLADEMTAASVDVLFMQLRAERDLHVAAVRYGIDDADDEGALFSTGFEQIKEGTQRQLGKMMHALGKLVGADEARQRMNDATNAAFERLRADELAEDEAFLAEHGAAFAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGK-SGSMVMSEE-DDIAGPRRPLSAGDLLSNEWLVHEVMISGETLTVSMEEAIENQLLRSGNPAVAAGGGEDGVNAYWSKVESHVAAEDYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDDTKATLAGWGRTQDEVEGGRRRLEPAMVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQHGVEYERDRFTEKLDVGEISLDMTHLWLHRAIRQLRSAAGVAAT 3423
MHNRRVNQRRRESFDDASGVSPARIKGMHEFESKLARAERNRDKLRRERRRRAMERYEEGKARVLEQGA ASS SSSAF+GGVGGVRSGCLRA PGSG GGGITNTK TNGELGRDNRRRRAAEA QRMRSLRQRMLSHTSRVSERKTRLFAARLLQAWWRCVREGKSFDV GLA+SISSSSSP AT QRSPLGSPTSWATAQGLGLSVPDVGCGS+VPFGDYMRNQASAASGGGPALSPPVLDPCTRSPIPTSGRFSPGVGGSKK LG A AAVAP IG RETAGG XXXXXXXXXXXXXX MNVTTMGYGFGSHHKAALAIQAFLRRNMHPLKVANALLAGRLSIKVLCAAVRTMSTSTFDEAIDVMSTRAIVSHCETALKALRMGREMRCVPQTVRSARAFLSALLVNFFPTSALDDEGALSS+PEGTAPLKVEKDRLVRAAGNAIQALLGLETT ATF AEHFPKIRRASATMVRARVAFCRRFAEWKRKDAVRLADEMTAASVDVLFMQLRAERDLHVAAVRYGIDDADDEGALFSTGFEQIKEGTQRQLGKMMHALGKLVGADEARQRMNDAT+AAFERLRADELAEDEAFLAEHGAAFA+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SGSM MSEE DDIAGPRRPLS GDLLS EWLV VMISGETLTVSMEEAIENQLLRSGNPAVAAGGGEDGVNAYWS VESHVAAEDYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDDTKATLAGWGRTQDEVEGGRRRLEPAMVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQHGVEYERDRFTEKLDVGE SLDMTHLWLHRAIRQLRSAAGVAAT
Sbjct: 1 MHNRRVNQRRRESFDDASGVSPARIKGMHEFESKLARAERNRDKLRRERRRRAMERYEEGKARVLEQGAFASSASSSAFVGGVGGVRSGCLRAGPGSGGGGGITNTKSTNGELGRDNRRRRAAEAXXXXXXXXXQRMRSLRQRMLSHTSRVSERKTRLFAARLLQAWWRCVREGKSFDVTGLALSISSSSSPDATPQQRSPLGSPTSWATAQGLGLSVPDVGCGSVVPFGDYMRNQASAASGGGPALSPPVLDPCTRSPIPTSGRFSPGVGGSKKVLGTAGAAVAPTIGRGCARETAGGGXXXXXXXXXXXXXXVSAMNVTTMGYGFGSHHKAALAIQAFLRRNMHPLKVANALLAGRLSIKVLCAAVRTMSTSTFDEAIDVMSTRAIVSHCETALKALRMGREMRCVPQTVRSARAFLSALLVNFFPTSALDDEGALSSSPEGTAPLKVEKDRLVRAAGNAIQALLGLETTMDAAXXXXXXXXXXXXXXXXXXXXXXXXTAAMATFSAEHFPKIRRASATMVRARVAFCRRFAEWKRKDAVRLADEMTAASVDVLFMQLRAERDLHVAAVRYGIDDADDEGALFSTGFEQIKEGTQRQLGKMMHALGKLVGADEARQRMNDATDAAFERLRADELAEDEAFLAEHGAAFADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSMAMSEEEDDIAGPRRPLSGGDLLSKEWLVPGVMISGETLTVSMEEAIENQLLRSGNPAVAAGGGEDGVNAYWSTVESHVAAEDYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDDTKATLAGWGRTQDEVEGGRRRLEPAMVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQHGVEYERDRFTEKLDVGETSLDMTHLWLHRAIRQLRSAAGVAAT 973
BLAST of mRNA_Ecto-sp13_S_contig1491.3736.1 vs. uniprot
Match: A0A835Z8D6_9STRA (T-complex protein 11-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8D6_9STRA) HSP 1 Score: 124 bits (311), Expect = 5.470e-25 Identity = 65/167 (38.92%), Postives = 95/167 (56.89%), Query Frame = 1
Query: 2920 ELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDDTKATLAGWGRTQDEVEGGRRRLEPA----MVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQHGVEYERDRFTEKLDVGEISLDMTHLWLHRAIRQLRSAA 3408
E+ K+ LTP R DL AET A+D LL QM GA D ++ F G+R++ L+AP R T+A L R D++ +P ++ FE++F++ DE+ D NAH+ + P+L+QHGVEYERD+F E+L GE++L+ T WL +R L A
Sbjct: 595 EVSAKLCALTPSRADLNAETRAALDASLLGQMAAQGALDSTTMANLIRFIGQRIMALQAPARVPATQAWLQ---RFNDDMAAAASSGDPGAPVRLLPRIFEFVFARIDEVRQDAANAHVAVLVPYLQQHGVEYERDKFNERLSAGEVTLERTKAWLSSTVRALPQGA 758
BLAST of mRNA_Ecto-sp13_S_contig1491.3736.1 vs. uniprot
Match: K8YQD2_NANGC (T-complex 11 like isoform cra b n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YQD2_NANGC) HSP 1 Score: 109 bits (273), Expect = 1.790e-20 Identity = 59/186 (31.72%), Postives = 102/186 (54.84%), Query Frame = 1
Query: 2890 DYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDDTKATLAGWGRTQDEVEGGRRRLEPA---------MVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQHGVEYERDRFTEKLDVGEISLDMTHLWLHRAIRQLRSAAGVAA 3420
+Y P L LV E+R+K+ LTPRR DLA E +D +LL QM G D ++++ + + ++ L+AP+R +T + ++G+ + EV + A ++ F +F++ DE DI +AH+Q + P+L QHGVEYER++F + G+ L T WL + + +A+ +++
Sbjct: 559 EYEPFLALVDEVREKLTSLTPRRIDLAEELRAHLDKKLLSQMALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSWISGF---EKEVHASMSASQHAKYIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHGVEYEREKFAARFLTGQWRLLNTEAWLKKVLASPENASHLSS 741
BLAST of mRNA_Ecto-sp13_S_contig1491.3736.1 vs. uniprot
Match: D8LHM8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHM8_ECTSI) HSP 1 Score: 97.8 bits (242), Expect = 5.190e-20 Identity = 76/93 (81.72%), Postives = 76/93 (81.72%), Query Frame = 1
Query: 142 MESPVRSVETGENGSXXXXXXXNQQQGKATAAXXXXXXXXAAE--ETSPSQRFEAKSYLERQVEELSCADEDEAQEKVSQRLQFKQDQAQKKR 414
MESPVRSVETGENGS XXXXXX XXXXXXXX ETSPSQRFEAKSYLERQVEELSCADEDEAQEKVSQRLQ KQDQAQKKR
Sbjct: 1 MESPVRSVETGENGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETSPSQRFEAKSYLERQVEELSCADEDEAQEKVSQRLQLKQDQAQKKR 93
BLAST of mRNA_Ecto-sp13_S_contig1491.3736.1 vs. uniprot
Match: A0A6H5K209_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K209_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 2.090e-19 Identity = 74/92 (80.43%), Postives = 76/92 (82.61%), Query Frame = 1
Query: 142 MESPVRSVETGENGSXXXXXXXNQQQGKATAAXXXXXXXXAAE-ETSPSQRFEAKSYLERQVEELSCADEDEAQEKVSQRLQFKQDQAQKKR 414
MESPVRSVETG+NGS XXXXXX XXXXXXXX ETS SQRFEAKSYLERQVEELSCADEDEAQEKVSQRLQFKQDQA+KKR
Sbjct: 1 MESPVRSVETGKNGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXETSTSQRFEAKSYLERQVEELSCADEDEAQEKVSQRLQFKQDQARKKR 92
BLAST of mRNA_Ecto-sp13_S_contig1491.3736.1 vs. uniprot
Match: A0A7S3V2N3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V2N3_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 2.920e-16 Identity = 64/239 (26.78%), Postives = 117/239 (48.95%), Query Frame = 1
Query: 2656 SEEDDIAG----PRRPLSAGDLL-SNEWLVHEVMISGE-TLTVSMEEAIENQLLRSGNPA--VAAGGGEDGVNAYWSKVESHVAAEDYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDDTKATLAGWGRTQDEVEGGRRRLEPAMVRECFEYLFSKTDEIHVDILNAHLQFVTPFLK-QHGVEYERDRFTEKLDVGE 3345
SEE+D + P+ L ++ SNE + +E+M+ E L + ++ G+ V G DG + + + Y L+ ++ +R+++I LTP R DL + +A+D L+ Q + AFD F +++F G+R++ L+AP RN+DT L + L PA V Y ++ +I +D+ N HL + ++ ++G++Y+R F +K++ GE
Sbjct: 389 SEENDDSPKAVIPQYTLPKASIMPSNERMAYELMLDPEFKLEATSDKXXXXXXXXXGDSVNEVIRGNAGDGTEMIYRRFTDDLRQGKYEKLVAVLINIRERLIQLTPNRTDLKNQLNDAIDESLIRQQLKEKAFDKKSLFNIISFLGQRIINLQAPARNEDTNMWLKKLNEAHMDASNDWETLTPAAVN----YALNEIAKIELDMANFHLSVLGQHVQGENGIKYQRATFEKKINSGE 623
BLAST of mRNA_Ecto-sp13_S_contig1491.3736.1 vs. uniprot
Match: A0A7S1G3J8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G3J8_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 2.990e-11 Identity = 53/171 (30.99%), Postives = 79/171 (46.20%), Query Frame = 1
Query: 2914 VAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDDTKATLAGWGRTQDEVEGGRRRLEPAMVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQ--HGVEYERDRFTEKLDVGEISLDMTHLWLHRAIRQLRSAAGVAA 3420
+A ++ IIG+TPRR DLA+E A+D + + ++ + + R+ LEAP R DT+A + G A V + F + D + D N HL + P+L + G EYER +F E+L G SL WL + +LR+AA AA
Sbjct: 403 LAAIKAGIIGVTPRRPDLASEVTAAVDEDHIAMLVARRVLTGRALATLAGWLATRIASLEAPARAVDTRAWADDAAAALSAL--GDAAAPRAAVARVLAWCFLRLDVLRADAANFHLSTLAPYLTRGRKGAEYERRQFEERLREGATSLVGAAAWLRDTVDELRAAADAAA 571
BLAST of mRNA_Ecto-sp13_S_contig1491.3736.1 vs. uniprot
Match: A0A2R5G1C0_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G1C0_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 8.920e-11 Identity = 70/258 (27.13%), Postives = 110/258 (42.64%), Query Frame = 1
Query: 2680 PRRPLSAGDLLSNEWLVHEVMISGETLTVSMEEAIENQLLRSGNPAVAAGGGEDGVNAYWSKVESHVAAEDYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDDTKATLAGWGRTQDEVEGGRRRLEPAMVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQ-HGVEYERDRFTEKLDVGE-------ISLDMTHLWLHRAIRQLRSAAGVAATPA 3429
P P SNE ++H +M+ + E+A L +GN AA +D P +VAE+ ++ LTP R DL + E +D ELL Q + AF+ + +V F GER+L L+APIR + T++ L E RR+ + F+++ + I D+ N HL+ + + G Y R+ F +L GE + T W A+ + ++A AAT A
Sbjct: 525 PEVPKGVAAAPSNEEMMHRLMVDPDYKLGEEEDASAMHNL-AGNADAAA------------------MPKDMLP--SIVAEVCSRLAALTPNRADLIRQLEERLDTELLAQQVRENAFNQADLYSLVQFIGERLLALQAPIRQERTESWLMDLHVAAQE----RRKSWQDLAPRAFDFVLRELAAIETDMANFHLKVLRDNVSHDQGAAYLREHFIGRLRQGEYRKGPLAVGPHRTEAWFASALASVETSA--AATTA 755
BLAST of mRNA_Ecto-sp13_S_contig1491.3736.1 vs. uniprot
Match: A0A3G4ZWQ3_9VIRU (Uncharacterized protein n=1 Tax=Edafosvirus sp. TaxID=2487765 RepID=A0A3G4ZWQ3_9VIRU) HSP 1 Score: 75.9 bits (185), Expect = 1.640e-10 Identity = 43/139 (30.94%), Postives = 74/139 (53.24%), Query Frame = 1
Query: 2851 AYWSKVESHVAAEDYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDDT-KATLAGWGRTQDEVEGGRRRLEPAMVRECFEYLFSKTDEIHVDILNAHL 3264
+YW+ +E +A Y L+ ++AE++ +++ L P E E++D EL+EQM+ AFD R + +++EL+APIRNDDT K + R Q+ GG + +++ Y+ EI I+N+H+
Sbjct: 264 SYWNVLEEDIAIGKYVVLMKILAEIKAELLNLRPNNVKYKEELDESLDFELMEQMIKNKAFDFKSLIRYAEYIIHKLIELQAPIRNDDTRKKWVEMLARMQNGDVGGFDKCATFIIK----YIMELIQEIKDAIINSHI 398 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1491.3736.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1491.3736.1 >prot_Ecto-sp13_S_contig1491.3736.1 ID=prot_Ecto-sp13_S_contig1491.3736.1|Name=mRNA_Ecto-sp13_S_contig1491.3736.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1199bp MESPVRSVETGENGSGGAGGGANQQQGKATAAGQAGAGGAAAEETSPSQRback to top mRNA from alignment at Ecto-sp13_S_contig1491:3999..14144+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1491.3736.1 ID=mRNA_Ecto-sp13_S_contig1491.3736.1|Name=mRNA_Ecto-sp13_S_contig1491.3736.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10146bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1491:3999..14144+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1491:3999..14144+ >mRNA_Ecto-sp13_S_contig1491.3736.1 ID=mRNA_Ecto-sp13_S_contig1491.3736.1|Name=mRNA_Ecto-sp13_S_contig1491.3736.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3597bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1491:3999..14144+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |