prot_Ecto-sp13_S_contig14907.3733.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14907.3733.1
Unique Nameprot_Ecto-sp13_S_contig14907.3733.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length194
Homology
BLAST of mRNA_Ecto-sp13_S_contig14907.3733.1 vs. uniprot
Match: D7G9C2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9C2_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 3.190e-41
Identity = 93/132 (70.45%), Postives = 95/132 (71.97%), Query Frame = 0
Query:   61 GADEGQLAMTSDGEAAFQYLERNTSPEGRRLEESETVEDTAAIEERFALIEAALEDRQKLAKGLQTYTFGQRVAAREHDREEIEVLKKQGILIGAHIPMGPSGLTLDRSTIGTFGGFAISLLDAAELARANR 192
            GADEGQLAMTSDGEAAFQ LERNTSPEGR+LE +ETVEDTAAIEE                                  REEIEVLKKQGILIGAHIPMGPSGL LDRSTIGTFGGFAISLLDAAELARANR
Sbjct:  148 GADEGQLAMTSDGEAAFQDLERNTSPEGRKLEVAETVEDTAAIEE----------------------------------REEIEVLKKQGILIGAHIPMGPSGLILDRSTIGTFGGFAISLLDAAELARANR 245          
BLAST of mRNA_Ecto-sp13_S_contig14907.3733.1 vs. uniprot
Match: A0A6H5J8U3_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8U3_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 7.170e-38
Identity = 87/134 (64.93%), Postives = 91/134 (67.91%), Query Frame = 0
Query:   61 GADEGQLAMTSDGEAAFQYLERNTSPEGRRLEESETVEDTAAIEERFALIEAALEDRQKLAKGLQTYTFGQRVAAREHDREEIEVLKKQGILIGAHIPMGPSGLTLDRSTIGTFGGFAISLLDAAELARANRVA 194
            GADEG+LAMTSDGE AFQ  +RNTSP GR+LEE  T EDTAAIEE                                  REEIEVLK+QGILIG HIPMGPSGL LDRSTIGTFGGFAISLLDAAELARANRVA
Sbjct:  148 GADEGELAMTSDGEMAFQNFQRNTSPGGRKLEEGGTAEDTAAIEE----------------------------------REEIEVLKRQGILIGVHIPMGPSGLVLDRSTIGTFGGFAISLLDAAELARANRVA 247          
BLAST of mRNA_Ecto-sp13_S_contig14907.3733.1 vs. uniprot
Match: A0A482S2K8_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2K8_9ARCH)

HSP 1 Score: 54.7 bits (130), Expect = 1.630e-5
Identity = 33/91 (36.26%), Postives = 52/91 (57.14%), Query Frame = 0
Query:  102 AIEERFALIEAALEDRQKLAKGLQTYTFGQRVAAREHDREEIEVLKKQGILIGAHIPMGPSGLTLDRSTIGTFGGFAISLLDAAELARANR 192
            A+E++   + A +E + + A+ L  Y   Q+  A+  +  E E LK+QGI++G HIP  PS L LD S I  +  F+ ++L A +L   NR
Sbjct:    4 AVEDKIKAVYAEIERKTREAEELGKYLNTQQQLAKLAEETEEEDLKRQGIIVGQHIPSLPSRLDLDASRIAEYDSFSSTVLVAKDLMVQNR 94          
BLAST of mRNA_Ecto-sp13_S_contig14907.3733.1 vs. uniprot
Match: A0A1V9Z2V2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z2V2_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 7.510e-5
Identity = 38/105 (36.19%), Postives = 53/105 (50.48%), Query Frame = 0
Query:   97 VEDTAAIE--------ERFALIEAALEDRQKLAKGLQTYTFGQRVAAREHDREEIEVLKKQGILIGAHIPMGPSGLTLDRSTIGTFGGFAISLLDAAELARANRV 193
            VE+T A E        +R A +EA L  + K A  L      +R  A E D  +   L KQG+++ A IP+GPS   LD + +  FG FA SL+ A  L + N +
Sbjct:   80 VEETKATEHPYLVFGRQRVAEVEADLRAKVKQATELMALLEARRREALEKDETQARELIKQGLVVKAQIPIGPSNFRLDPTELEPFGEFAESLIQARTLLQENHL 184          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14907.3733.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G9C2_ECTSI3.190e-4170.45EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5J8U3_9PHAE7.170e-3864.93EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A482S2K8_9ARCH1.630e-536.26Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A1V9Z2V2_9STRA7.510e-536.19Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14907contigEcto-sp13_S_contig14907:474..2259 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14907.3733.1mRNA_Ecto-sp13_S_contig14907.3733.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14907 474..2259 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14907.3733.1 ID=prot_Ecto-sp13_S_contig14907.3733.1|Name=mRNA_Ecto-sp13_S_contig14907.3733.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=194bp
MSTPDPTTSHDGGEAQDPNIKPKPRQSSNNVEGAGAAKGNSTDAAGIDAS
EGVEVTETDEGADEGQLAMTSDGEAAFQYLERNTSPEGRRLEESETVEDT
AAIEERFALIEAALEDRQKLAKGLQTYTFGQRVAAREHDREEIEVLKKQG
ILIGAHIPMGPSGLTLDRSTIGTFGGFAISLLDAAELARANRVA
back to top