prot_Ecto-sp13_S_contig1490.3729.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1490.3729.1
Unique Nameprot_Ecto-sp13_S_contig1490.3729.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length490
Homology
BLAST of mRNA_Ecto-sp13_S_contig1490.3729.1 vs. uniprot
Match: D8LBU8_ECTSI (Similar to centromere protein E n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBU8_ECTSI)

HSP 1 Score: 749 bits (1933), Expect = 3.160e-265
Identity = 451/490 (92.04%), Postives = 454/490 (92.65%), Query Frame = 0
Query:    1 MPTMSESEAFELKLEMQHLQEKLTFLAGGTNGAELVAVVMEKDAELEQINKKLKEVEASRSKLAESAKRVDARRREAMRQSEHQLVRVQALERELERQLGISDEQRRRVADTKEDLTLTKXXXXXXXVEMASKEASALERLATXHXXXXSLQRMVEGQRDAIVGLESDKRGLEETVSRKEDEIKSLEQRKKDVAARSREMKNHLEKLLLDSQKSQADLAGQRSTLEAELGKLRRRMDERAKMALEEERKTTRLARECGNLKTELEAARQDITSASEELAAVRLTKQEADEALLGKDKENSKLRNKNESLRVEMDRRLHALNQEKGDLAEKMEESIRELKERENLLHGQLEATGRENKEIQEAQSAEIREMEEQLRLANEDRERLKADARKAKAHSKSEARWRARAEDVMAGRAADLERANAEVAAMKHLGVELRHMEAENKDLKARIERQEAFHKRRMEKEKREKRAGRPVSGGSGRVPPGPAGGAASGK 490
            MPTMSESE FELKLEMQHLQEKLTFLAGGTNGAELV VVMEKDAELEQINKKLKEVEASRSKLAESAKRVDARRREAMRQSEHQLVRVQALERELERQLGISDEQRRRVADTKEDL LT XXXXXX VEMASKEASALERLAT      SLQRMVEGQRD IV LESD +                 QRKKDVAARSREMKNHLEKLLL+SQKSQADLAGQRSTLEAELGKLRRRMDERAK ALEEERKTT LARECGNLKTELEAARQDITSASEELAAVRLTKQEADEALLGKDKENSKLRNKNESLRVEMDRRLHALNQEKGDLAEKMEESIRELKERENLLHGQLEATGRENKEIQEAQSAEI EMEEQLRLANEDRERLKADARKAKAHSKSEARWRARAEDVMAGRAADLERANAEVAAMK  GVELRHMEAENKDLKARIERQEAFHKRRMEKEKREKRAGRPVSGGSGRVPPGPAGGAASG+
Sbjct:    1 MPTMSESEVFELKLEMQHLQEKLTFLAGGTNGAELVDVVMEKDAELEQINKKLKEVEASRSKLAESAKRVDARRREAMRQSEHQLVRVQALERELERQLGISDEQRRRVADTKEDLALTXXXXXXXQVEMASKEASALERLATARDEASSLQRMVEGQRDTIVRLESDSKXXXXXXXXXXXXXXXXXQRKKDVAARSREMKNHLEKLLLNSQKSQADLAGQRSTLEAELGKLRRRMDERAKTALEEERKTTTLARECGNLKTELEAARQDITSASEELAAVRLTKQEADEALLGKDKENSKLRNKNESLRVEMDRRLHALNQEKGDLAEKMEESIRELKERENLLHGQLEATGRENKEIQEAQSAEISEMEEQLRLANEDRERLKADARKAKAHSKSEARWRARAEDVMAGRAADLERANAEVAAMKQQGVELRHMEAENKDLKARIERQEAFHKRRMEKEKREKRAGRPVSGGSGRVPPGPAGGAASGR 490          
BLAST of mRNA_Ecto-sp13_S_contig1490.3729.1 vs. uniprot
Match: A0A6H5KXI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXI9_9PHAE)

HSP 1 Score: 427 bits (1098), Expect = 3.320e-142
Identity = 255/291 (87.63%), Postives = 261/291 (89.69%), Query Frame = 0
Query:  200 MKNHLEKLLLDSQKSQADLAGQRSTLEAELGKLRRRMDERAKMALEEERKTTRLARECGNLKTELEAARQDITSASEELAAVRLTKQEADEALLGKDKENSKLRNKNESLRVEMDRRLHALNQEKGDLAEKMEESIRELKERENLLHGQLEATGRENKEIQEAQSAEIREMEEQLRLANEDRERLKADARKAKAHSKSEARWRARAEDVMAGRAADLERANAEVAAMKHLGVELRHMEAENKDLKARIERQEAFHKRRMEKEKREKRAGRPVSGGSGRVPPGPAGGAASGK 490
            MKNHLEKLLLDSQKSQADLAGQR+TLEAELGKLRRRMDERAKMALEEERKTTRLARECGNLKTELEAARQDITSASEELAAVRLTKQEADEALL KDKENSKLR+KNESLRVEMDRRLHALNQEKGDLAEKMEESIRELK+RENLLHGQLEATGRENKEIQEAQ+AEI EMEEQLRLANEDRERLKADARKAKAHSK                          VAAMKH GVELRHMEAENKDLKARIERQEAFHKRRME+EKREKRAGRPVSGG GRVPPGPAGGAASG+
Sbjct:    1 MKNHLEKLLLDSQKSQADLAGQRATLEAELGKLRRRMDERAKMALEEERKTTRLARECGNLKTELEAARQDITSASEELAAVRLTKQEADEALLEKDKENSKLRSKNESLRVEMDRRLHALNQEKGDLAEKMEESIRELKDRENLLHGQLEATGRENKEIQEAQAAEISEMEEQLRLANEDRERLKADARKAKAHSK--------------------------VAAMKHQGVELRHMEAENKDLKARIERQEAFHKRRMEREKREKRAGRPVSGGCGRVPPGPAGGAASGR 265          
BLAST of mRNA_Ecto-sp13_S_contig1490.3729.1 vs. uniprot
Match: A0A6H5KY91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY91_9PHAE)

HSP 1 Score: 314 bits (804), Expect = 1.640e-102
Identity = 181/198 (91.41%), Postives = 184/198 (92.93%), Query Frame = 0
Query:    1 MPTMSESEAFELKLEMQHLQEKLTFLAGGTNGAELVAVVMEKDAELEQINKKLKEVEASRSKLAESAKRVDARRREAMRQSEHQLVRVQALERELERQLGISDEQRRRVADTKEDLTLTKXXXXXXXVEMASKEASALERLATXHXXXXSLQRMVEGQRDAIVGLESDKRGLEETVSRKEDEIKSLEQRKKDVAARSR 198
            MPTMSESE FELKLEMQHLQEKLTFLAGGTNGAELVAVVMEKDAELEQINKKLKEVEASRSKLAESAKRVDARRREAMRQSEHQLVRVQALERELERQLGISDEQRRRVADTKEDLTLTK       VEMASKEASALERLAT H    SLQRMVEGQR+ IVGLESDK+GLEETVSR+EDEIKSLEQRKKDVAARSR
Sbjct:    1 MPTMSESEVFELKLEMQHLQEKLTFLAGGTNGAELVAVVMEKDAELEQINKKLKEVEASRSKLAESAKRVDARRREAMRQSEHQLVRVQALERELERQLGISDEQRRRVADTKEDLTLTKEELRKTQVEMASKEASALERLATAHDEASSLQRMVEGQRETIVGLESDKKGLEETVSRREDEIKSLEQRKKDVAARSR 198          
BLAST of mRNA_Ecto-sp13_S_contig1490.3729.1 vs. uniprot
Match: A0A835ZIP7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIP7_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 6.660e-13
Identity = 71/232 (30.60%), Postives = 114/232 (49.14%), Query Frame = 0
Query:   10 FELKLEMQHLQEKLTFLAGGTNGAELVAVVMEKDAELEQINKKLKEVEASRSKLAESAKRVDARRREAMRQSEHQLVRVQALERELERQLGISDEQRRRVAD-----TKEDLTLTKXXXXXXXVEMASKE----------------ASALER------------LATXHXXXXSLQRMVEGQRDAIVGLESDKRGLEETVSRKEDEIKSLEQRKKDVAARSREMKNHLEKLL 208
            F+LK+E ++++EKL FL G TNGAEL  ++MEK++E+  +N++L E +   ++L ES K+ D +R +  +  E Q  R    E  L  Q G++D  R   A       ++D T+ +       ++ +S                  ASA  R            LA  H     ++ +VE QR  +      +  L E V  K+ E+++LE R+ D+AAR+R +K  LEK L
Sbjct:   41 FQLKMENRNMREKLNFLTGTTNGAELTGIIMEKESEIRTLNERLVEQDQQITQLVESLKKGDTKREKLRKAFEAQEQRALGFETALNSQFGVTDSLRATCATLEAEGAEKDATIAQLQGDQLRLQCSSARVAAHAGAATCRHRPHRASAWSRTCDISQQRTDAELAAAHAEASDMRAVVETQRRKLEEGGQREAQLRELVDAKKGEVEALETRRSDLAARARGIKQELEKSL 272          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1490.3729.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LBU8_ECTSI3.160e-26592.04Similar to centromere protein E n=1 Tax=Ectocarpus... [more]
A0A6H5KXI9_9PHAE3.320e-14287.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY91_9PHAE1.640e-10291.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZIP7_9STRA6.660e-1330.60Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 39..66
NoneNo IPR availableCOILSCoilCoilcoord: 74..129
NoneNo IPR availableCOILSCoilCoilcoord: 162..203
NoneNo IPR availableCOILSCoilCoilcoord: 360..394
NoneNo IPR availableCOILSCoilCoilcoord: 426..464
NoneNo IPR availableCOILSCoilCoilcoord: 317..348
NoneNo IPR availableCOILSCoilCoilcoord: 250..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1490contigEcto-sp13_S_contig1490:110..9118 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1490.3729.1mRNA_Ecto-sp13_S_contig1490.3729.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1490 110..9893 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1490.3729.1 ID=prot_Ecto-sp13_S_contig1490.3729.1|Name=mRNA_Ecto-sp13_S_contig1490.3729.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=490bp
MPTMSESEAFELKLEMQHLQEKLTFLAGGTNGAELVAVVMEKDAELEQIN
KKLKEVEASRSKLAESAKRVDARRREAMRQSEHQLVRVQALERELERQLG
ISDEQRRRVADTKEDLTLTKEELRKTQVEMASKEASALERLATAHDEASS
LQRMVEGQRDAIVGLESDKRGLEETVSRKEDEIKSLEQRKKDVAARSREM
KNHLEKLLLDSQKSQADLAGQRSTLEAELGKLRRRMDERAKMALEEERKT
TRLARECGNLKTELEAARQDITSASEELAAVRLTKQEADEALLGKDKENS
KLRNKNESLRVEMDRRLHALNQEKGDLAEKMEESIRELKERENLLHGQLE
ATGRENKEIQEAQSAEIREMEEQLRLANEDRERLKADARKAKAHSKSEAR
WRARAEDVMAGRAADLERANAEVAAMKHLGVELRHMEAENKDLKARIERQ
EAFHKRRMEKEKREKRAGRPVSGGSGRVPPGPAGGAASGK
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