mRNA_Ecto-sp13_S_contig14874.3710.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14874.3710.1 vs. uniprot
Match: A0A6H5JRM9_9PHAE (Ribulose-phosphate 3-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRM9_9PHAE) HSP 1 Score: 217 bits (552), Expect = 1.410e-68 Identity = 110/114 (96.49%), Postives = 111/114 (97.37%), Query Frame = 1
Query: 139 MSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHLMVSHPAQWVDDMAAAGVDRRVFLLFTFHVEATDEVAELIVAVKAKGMGVGVALKPATPVE 480
MSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHLMVSHPAQWVDDMAAAGVDRRVF LFTFHVEATD+VAELI AVKAKGM VGVALKPATPVE
Sbjct: 1 MSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHLMVSHPAQWVDDMAAAGVDRRVFPLFTFHVEATDKVAELIAAVKAKGMRVGVALKPATPVE 114
BLAST of mRNA_Ecto-sp13_S_contig14874.3710.1 vs. uniprot
Match: A0A835Z9Z5_9STRA (Ribulose-phosphate 3-epimerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Z5_9STRA) HSP 1 Score: 172 bits (436), Expect = 3.540e-51 Identity = 90/131 (68.70%), Postives = 102/131 (77.86%), Query Frame = 1
Query: 94 HSRPAAIGPSVLAADMSRLMEESLDVER--QGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHLMVSHPAQWVDDMAAAGVDRRVFLLFTFHVEATDEVAELIVAVKAKGMGVGVALKPATPVE 480
H P IGPSVLA+DMSRL EES ++ + + DY+HLDVMDGHFVPNLTFGAPVIK LRKHTKA LDAHLMVS PAQWVDDMA AGVDR TFH+EAT++ A LI VK +GM VG+ALKP TP +
Sbjct: 1 HHLPVGIGPSVLASDMSRLAEESAEIAQHFKEHDYLHLDVMDGHFVPNLTFGAPVIKSLRKHTKATLDAHLMVSDPAQWVDDMADAGVDR-----LTFHIEATEDPAALIRRVKGRGMKVGIALKPKTPAD 126
BLAST of mRNA_Ecto-sp13_S_contig14874.3710.1 vs. uniprot
Match: A0A7S0MF64_9CRYP (Ribulose-phosphate 3-epimerase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MF64_9CRYP) HSP 1 Score: 157 bits (396), Expect = 3.790e-45 Identity = 78/131 (59.54%), Postives = 97/131 (74.05%), Query Frame = 1
Query: 88 RFHSRPAAIGPSVLAADMSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHLMVSHPAQWVDDMAAAGVDRRVFLLFTFHVEATDEVAELIVAVKAKGMGVGVALKPATPVE 480
+ H RP AI PS+LA D++ L E+ V + DY+HLDVMDGHFVPNL++GAPV+K LR H+KA D HLMVS PA+WV DMA AG D +FTFH+EATD+ A LI A+KA GM VG+A+KP TPV+
Sbjct: 4 KMHVRPPAILPSLLACDLANLAHEANRVAPEKTDYVHLDVMDGHFVPNLSWGAPVVKCLRPHSKAFFDVHLMVSEPAKWVKDMAEAGAD-----MFTFHIEATDDAAGLIKAIKAAGMKVGIAIKPKTPVD 129
BLAST of mRNA_Ecto-sp13_S_contig14874.3710.1 vs. uniprot
Match: A0A0D2WU07_CAPO3 (Ribulose-phosphate 3-epimerase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WU07_CAPO3) HSP 1 Score: 152 bits (383), Expect = 2.840e-43 Identity = 80/130 (61.54%), Postives = 93/130 (71.54%), Query Frame = 1
Query: 91 FHSRPAAIGPSVLAADMSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHLMVSHPAQWVDDMAAAGVDRRVFLLFTFHVEATDEVAELIVAVKAKGMGVGVALKPATPVE 480
FH IGPSVLA+DMS L E+ V GADY+HLDVMDGHFVPN+T GAPVIK LRKH+KA D H+MVS P QWVDDMA AG D+ FTFH+E+T + LI ++AK M VGVA+KP TP E
Sbjct: 3 FHKCNCRIGPSVLASDMSCLASETQRVVDAGADYVHLDVMDGHFVPNITMGAPVIKCLRKHSKAFFDLHMMVSKPEQWVDDMADAGGDQ-----FTFHLESTADPMALIRQIRAKNMKVGVAIKPNTPAE 127
BLAST of mRNA_Ecto-sp13_S_contig14874.3710.1 vs. uniprot
Match: A0A1Y1Z982_9FUNG (Ribulose-phosphate 3-epimerase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z982_9FUNG) HSP 1 Score: 150 bits (380), Expect = 5.580e-43 Identity = 74/123 (60.16%), Postives = 90/123 (73.17%), Query Frame = 1
Query: 106 AAIGPSVLAADMSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHLMVSHPAQWVDDMAAAGVDRRVFLLFTFHVEATDEVAELIVAVKAKGMGVGVALKPATP 474
A I PS+L+ D ++L E+ + GADY+H+DVMDGHFVPNLT GAP+IK LRKHTKA LD HLMVSHP QWV+D A AG D +FTFH+EAT + LI +V+ GM VG+ALKP TP
Sbjct: 4 AKIAPSLLSGDFAKLAEDCQYMVECGADYLHMDVMDGHFVPNLTLGAPIIKSLRKHTKAFLDCHLMVSHPEQWVEDFANAGAD-----MFTFHIEATQDAPALIESVRKTGMKVGIALKPKTP 121
BLAST of mRNA_Ecto-sp13_S_contig14874.3710.1 vs. uniprot
Match: A0A485KVB4_9STRA (Ribulose-phosphate 3-epimerase n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KVB4_9STRA) HSP 1 Score: 149 bits (377), Expect = 2.040e-42 Identity = 77/129 (59.69%), Postives = 94/129 (72.87%), Query Frame = 1
Query: 94 HSRPAAIGPSVLAADMSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHLMVSHPAQWVDDMAAAGVDRRVFLLFTFHVEATDEVAELIVAVKAKGMGVGVALKPATPVE 480
HS IGPS+LA+D+S L +E+L V GADY+HLDVMDGHFVPN+T+GAPVIK LR+HTKA D H+MVS P +WVDD+ AG D+ FTFH+E+T LI ++A GM VGVALKP T VE
Sbjct: 3 HSCVCKIGPSMLASDLSCLKDEALKVVAAGADYLHLDVMDGHFVPNITWGAPVIKSLRQHTKAFFDVHMMVSEPEKWVDDIKDAGGDQ-----FTFHLESTKNPEALIQQIRATGMKVGVALKPGTAVE 126
BLAST of mRNA_Ecto-sp13_S_contig14874.3710.1 vs. uniprot
Match: A0A024U095_9STRA (Ribulose-phosphate 3-epimerase n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024U095_9STRA) HSP 1 Score: 149 bits (377), Expect = 2.040e-42 Identity = 77/129 (59.69%), Postives = 94/129 (72.87%), Query Frame = 1
Query: 94 HSRPAAIGPSVLAADMSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHLMVSHPAQWVDDMAAAGVDRRVFLLFTFHVEATDEVAELIVAVKAKGMGVGVALKPATPVE 480
HS IGPS+LA+D+S L +E+L V GADY+HLDVMDGHFVPN+T+GAPVIK LRKHT A D H+MVS P +WVDD+ AG D+ FTFH+E+T + LI ++A GM VGVALKP T VE
Sbjct: 3 HSCVCKIGPSMLASDLSCLKDEALKVVAAGADYLHLDVMDGHFVPNITWGAPVIKSLRKHTTAFFDVHMMVSEPEKWVDDIKDAGGDQ-----FTFHLESTSDPEALIRQIRAAGMKVGVALKPGTAVE 126
BLAST of mRNA_Ecto-sp13_S_contig14874.3710.1 vs. uniprot
Match: A0A7S2XXF9_9STRA (Ribulose-phosphate 3-epimerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXF9_9STRA) HSP 1 Score: 150 bits (378), Expect = 7.230e-42 Identity = 84/131 (64.12%), Postives = 95/131 (72.52%), Query Frame = 1
Query: 94 HSRPAAIGPSVLAADMSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTK--ALLDAHLMVSHPAQWVDDMAAAGVDRRVFLLFTFHVEATDEVAELIVAVKAKGMGVGVALKPATPVE 480
H+R A I PSVLA D+SRL +ES V GAD +HLDVMDGHFVPNLTFG+PVI LRK ALLD HLMV++P +WV+DMA AG D FTFHVEA + AE I AVKA GM VG+ALKP TPVE
Sbjct: 52 HARSANIAPSVLACDLSRLAQESQRVLDAGADSVHLDVMDGHFVPNLTFGSPVIACLRKQVPRPALLDVHLMVTYPHKWVEDMAKAGAD-----CFTFHVEAEGQHAETIRAVKAAGMKVGLALKPGTPVE 177
BLAST of mRNA_Ecto-sp13_S_contig14874.3710.1 vs. uniprot
Match: M4C3P1_HYAAE (Ribulose-phosphate 3-epimerase n=26 Tax=Peronosporaceae TaxID=4777 RepID=M4C3P1_HYAAE) HSP 1 Score: 147 bits (372), Expect = 1.370e-41 Identity = 76/129 (58.91%), Postives = 94/129 (72.87%), Query Frame = 1
Query: 94 HSRPAAIGPSVLAADMSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHLMVSHPAQWVDDMAAAGVDRRVFLLFTFHVEATDEVAELIVAVKAKGMGVGVALKPATPVE 480
HS IGPS+LA+D+SRL +ESL V GADY+HLDVMDGHFVPN+++G PVIK LR HTKA D H+MVS P QWV D+AAAG D+ FTFH+EAT + LI +++ GM VG+A+KP T E
Sbjct: 3 HSCTCKIGPSLLASDLSRLKDESLKVVAAGADYLHLDVMDGHFVPNISWGPPVIKSLRPHTKAFFDCHMMVSKPEQWVLDVAAAGGDQ-----FTFHLEATLDPEALIEQIRSAGMKVGLAIKPGTSAE 126
BLAST of mRNA_Ecto-sp13_S_contig14874.3710.1 vs. uniprot
Match: A0A5D6YAI9_9STRA (Ribulose-phosphate 3-epimerase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAI9_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.990e-41 Identity = 76/129 (58.91%), Postives = 93/129 (72.09%), Query Frame = 1
Query: 94 HSRPAAIGPSVLAADMSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHLMVSHPAQWVDDMAAAGVDRRVFLLFTFHVEATDEVAELIVAVKAKGMGVGVALKPATPVE 480
HS IGPS+LA+D+S L +E+ V GADY+HLDVMDGHFVPN+T+GAPVIK LR HT A D H+MV+ P QWVDD+A AG ++ FTFH+EAT LI ++A GM VGVA+KP TPVE
Sbjct: 3 HSCVCKIGPSMLASDLSCLRDEARKVVAAGADYLHLDVMDGHFVPNITWGAPVIKALRPHTDAFFDCHMMVAKPEQWVDDIADAGGNQ-----FTFHLEATTAPLALIEQIRAAGMKVGVAIKPGTPVE 126 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14874.3710.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14874.3710.1 >prot_Ecto-sp13_S_contig14874.3710.1 ID=prot_Ecto-sp13_S_contig14874.3710.1|Name=mRNA_Ecto-sp13_S_contig14874.3710.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=160bp MRRGFAGCSSWTALYILGVAAGTTSIMGERFHSRPAAIGPSVLAADMSRLback to top mRNA from alignment at Ecto-sp13_S_contig14874:1770..4286+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14874.3710.1 ID=mRNA_Ecto-sp13_S_contig14874.3710.1|Name=mRNA_Ecto-sp13_S_contig14874.3710.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2517bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14874:1770..4286+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14874:1770..4286+ >mRNA_Ecto-sp13_S_contig14874.3710.1 ID=mRNA_Ecto-sp13_S_contig14874.3710.1|Name=mRNA_Ecto-sp13_S_contig14874.3710.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=480bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14874:1770..4286+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |