prot_Ecto-sp13_S_contig1486.3703.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1486.3703.1
Unique Nameprot_Ecto-sp13_S_contig1486.3703.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length185
Homology
BLAST of mRNA_Ecto-sp13_S_contig1486.3703.1 vs. uniprot
Match: D7FXP7_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXP7_ECTSI)

HSP 1 Score: 353 bits (907), Expect = 2.010e-122
Identity = 172/185 (92.97%), Postives = 173/185 (93.51%), Query Frame = 0
Query:    1 MSANNISCSREHSRQARKIIAKSVYPFLDKDPALAIPPACPLHPELDVFKDQELHKRSVPGKSDTFHCGYCQKQFKTEFYMDRHMDNKHADRLDLAESDAIGHGIETAPGRCLGDLCPELGCGDYAADSCSVEIHAGGGSSLDAGAETIRRGCGACDPADMERRRRRCRALFHGCFDDSNGSAGS 185
            MSAN  SCSREHSRQARKIIAKSVYPFLDKDPALAIP ACPLHPELDVFKDQELHKR VPGK DTF CGYCQKQFKTEFYMDRHMDNKHADRL+LA SDAIGHGIE APGRCLGDLCPELGCGDYAADSCSVEIHAGGGSSL  GA TIRRGCGACDPADMERRRRRCRALFHGCFDDS GSAGS
Sbjct:    1 MSANESSCSREHSRQARKIIAKSVYPFLDKDPALAIPLACPLHPELDVFKDQELHKRLVPGKLDTFQCGYCQKQFKTEFYMDRHMDNKHADRLNLAGSDAIGHGIEPAPGRCLGDLCPELGCGDYAADSCSVEIHAGGGSSLGTGAGTIRRGCGACDPADMERRRRRCRALFHGCFDDSTGSAGS 185          
BLAST of mRNA_Ecto-sp13_S_contig1486.3703.1 vs. uniprot
Match: A0A6H5KY37_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY37_9PHAE)

HSP 1 Score: 357 bits (916), Expect = 2.560e-122
Identity = 173/185 (93.51%), Postives = 174/185 (94.05%), Query Frame = 0
Query:    1 MSANNISCSREHSRQARKIIAKSVYPFLDKDPALAIPPACPLHPELDVFKDQELHKRSVPGKSDTFHCGYCQKQFKTEFYMDRHMDNKHADRLDLAESDAIGHGIETAPGRCLGDLCPELGCGDYAADSCSVEIHAGGGSSLDAGAETIRRGCGACDPADMERRRRRCRALFHGCFDDSNGSAGS 185
            MSANN SCSREHSRQARKIIAK VYPFLDKDPALAIPPACPLHPELDVFKDQELHKR VPGKSDTF CGYC KQFKTEFYMDRHMDNKHADRL+LA SDAIGHGIE APGRCLGDLCPELGCGDYAADSCSVEIHA GGSSL  GA TIRRGCGACDPADMERRRRRCRALFHGCFDDSNGSAGS
Sbjct:    1 MSANNSSCSREHSRQARKIIAKRVYPFLDKDPALAIPPACPLHPELDVFKDQELHKRLVPGKSDTFQCGYCHKQFKTEFYMDRHMDNKHADRLNLAGSDAIGHGIEPAPGRCLGDLCPELGCGDYAADSCSVEIHARGGSSLGEGAGTIRRGCGACDPADMERRRRRCRALFHGCFDDSNGSAGS 185          
BLAST of mRNA_Ecto-sp13_S_contig1486.3703.1 vs. uniprot
Match: A0A2K3P9Z1_TRIPR (Nucleic acid binding protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3P9Z1_TRIPR)

HSP 1 Score: 95.1 bits (235), Expect = 8.140e-21
Identity = 63/187 (33.69%), Postives = 93/187 (49.73%), Query Frame = 0
Query:    4 NNISCSREHSRQARKIIAKSVYPFLDKDPALAIPPACPLHPELDVFKDQELHKRSVPGKSDTFHCGYCQKQFKTEFYMDRHMDNKHADRLDLAESDAIGH-----GIETAPGRCLGDLCPELGCGDYAADSCSVEIHAGGGSSLDAGAETIRRGCGACDPADMERRRRRCRALFHGCFDDSNGSAGS 185
            + I CSRE SR A KII + + PF++K+    I   C LHP+ D+++DQE HK  +    + + CGYC+K F  E  +D+H DN+H++ L+L  +D+         +E    +CL D+C  L         C  EI++G   S              C+PA   R +  C  L   CF  S+G A S
Sbjct:   18 HQIHCSRERSRIAWKIIQEYLTPFVEKE-KYNISRKCRLHPDNDIYRDQEQHKSHID--INEWKCGYCKKTFYEEKNLDQHFDNRHSNLLNLLIADSANLLSANLSLEKNESKCLADICGAL--------HCDHEINSGSKKSK-------------CNPAAAARNKHLCETLADSCFPVSHGPAAS 180          
BLAST of mRNA_Ecto-sp13_S_contig1486.3703.1 vs. uniprot
Match: A0A7C9EA33_OPUST (C2H2-type domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9EA33_OPUST)

HSP 1 Score: 92.0 bits (227), Expect = 6.850e-20
Identity = 49/122 (40.16%), Postives = 72/122 (59.02%), Query Frame = 0
Query:    4 NNISCSREHSRQARKIIAKSVYPFLDKDPALAIPPACPLHPELDVFKDQELHKRSVPGKSDTFHCGYCQKQFKTEFYMDRHMDNKHADRLDLAESDAIGHGIETAPGRCLGDLCPELGCGDY 125
            + + CSRE SR AR+II K + PF++++    IP  C LHP+ D+F DQE HK  V    + + CGYC+K F +E ++D+H DN+H + LD +E            G+CL +LC  L C  +
Sbjct:   68 HEVHCSRERSRAAREIIEKYLTPFVERE-RYEIPRNCRLHPDSDLFGDQEKHK--VQLDVNEWQCGYCKKSFLSEEFLDKHFDNRHYNLLDFSE------------GKCLANLCGALHCDHF 174          
BLAST of mRNA_Ecto-sp13_S_contig1486.3703.1 vs. uniprot
Match: UPI000B8CE378 (uncharacterized protein LOC110808992 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CE378)

HSP 1 Score: 93.6 bits (231), Expect = 8.050e-20
Identity = 50/121 (41.32%), Postives = 71/121 (58.68%), Query Frame = 0
Query:    2 SANNISCSREHSRQARKIIAKSVYPFLDKDPALAIPPACPLHPELDVFKDQELHKRSVPGKSDTFHCGYCQKQFKTEFYMDRHMDNKHADRLDLAESDAIGHGIETAPGRCLGDLCPELGC 122
            SA+ + CSRE SR A  II + + PF++K+    +P  C LHP+ D+++DQE HK  V    + + CGYC+K F  E Y+D+H DN+H D L+L +S            RCL D+C  L C
Sbjct:   50 SAHEVHCSRERSRAAWTIIQQHLMPFVEKE-RYHLPSGCKLHPDNDLYRDQEQHK--VQLDINEWQCGYCKKSFYEEKYLDKHFDNRHYDMLNLNQS------------RCLADICGALHC 155          
BLAST of mRNA_Ecto-sp13_S_contig1486.3703.1 vs. uniprot
Match: A0A2C9UGA0_MANES (C2H2-type domain-containing protein n=2 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9UGA0_MANES)

HSP 1 Score: 93.6 bits (231), Expect = 1.600e-19
Identity = 52/127 (40.94%), Postives = 76/127 (59.84%), Query Frame = 0
Query:    3 ANNISCSREHSRQARKIIAKSVYPFLDKDPALAIPPACPLHPELDVFKDQELHKRSVPGKSDTFHCGYCQKQFKTEFYMDRHMDNKHADRLDLAESDAIGHGIETAPGRCLGDLCPELGCGDYAADS 129
            A+ + CSRE SR A KII + + PF++K+    IP  C LHP  D+++DQE HK  +    + + CGYC+K+F  E Y+D+H+DN+H D L++++            GRCL D+C  L C D   DS
Sbjct:   97 AHEVHCSRERSRAAWKIIEEYLMPFVEKE-QYQIPIRCRLHPANDLYRDQEEHK--LQEDINEWRCGYCKKEFYDEKYLDKHLDNRHFDLLNVSQ------------GRCLADVCGALHC-DQVMDS 207          
BLAST of mRNA_Ecto-sp13_S_contig1486.3703.1 vs. uniprot
Match: A0A5N5JU54_9ROSI (C2H2-type domain-containing protein n=1 Tax=Salix brachista TaxID=2182728 RepID=A0A5N5JU54_9ROSI)

HSP 1 Score: 92.0 bits (227), Expect = 1.640e-19
Identity = 53/126 (42.06%), Postives = 72/126 (57.14%), Query Frame = 0
Query:    4 NNISCSREHSRQARKIIAKSVYPFLDKDPALAIPPACPLHPELDVFKDQELHKRSVPGKSDTFHCGYCQKQFKTEFYMDRHMDNKHADRLDLAESDAIGHGIETAPGRCLGDLCPELGCGDYAADS 129
            N + CSRE SR A KII + + PF++K+    I   C LHPE D+++DQE HK  V    + + CGYC+K F  E Y+D+H DN+H D L+++ S            RCL D+C  L C D   DS
Sbjct:   48 NGVHCSRERSRTAWKIIDEYLMPFVEKE-RYKISSRCRLHPENDLYRDQEQHKMHVD--INEWRCGYCKKTFYEEKYLDKHFDNRHYDLLNVSHS------------RCLADVCGALHC-DLVLDS 157          
BLAST of mRNA_Ecto-sp13_S_contig1486.3703.1 vs. uniprot
Match: A0A6A6MSJ6_HEVBR (C2H2-type domain-containing protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6MSJ6_HEVBR)

HSP 1 Score: 90.5 bits (223), Expect = 2.500e-19
Identity = 52/127 (40.94%), Postives = 74/127 (58.27%), Query Frame = 0
Query:    3 ANNISCSREHSRQARKIIAKSVYPFLDKDPALAIPPACPLHPELDVFKDQELHKRSVPGKSDTFHCGYCQKQFKTEFYMDRHMDNKHADRLDLAESDAIGHGIETAPGRCLGDLCPELGCGDYAADS 129
            A+ + CSRE SR A KII K + PF++K+    I  +C LHPE D+++DQE HK  +    + + CGYC+K F  E Y+D+H DN+H   L++++            GRCL D+C  L C D   DS
Sbjct:   28 AHEVHCSRERSRAAWKIIEKYLMPFVEKE-KYQISISCRLHPENDLYRDQEQHK--LHEDINEWRCGYCKKTFYDEKYLDKHFDNRHYHLLNVSQ------------GRCLADVCGALHC-DQVMDS 138          
BLAST of mRNA_Ecto-sp13_S_contig1486.3703.1 vs. uniprot
Match: A0A6A6MRH3_HEVBR (C2H2-type domain-containing protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6MRH3_HEVBR)

HSP 1 Score: 90.5 bits (223), Expect = 2.730e-19
Identity = 52/127 (40.94%), Postives = 74/127 (58.27%), Query Frame = 0
Query:    3 ANNISCSREHSRQARKIIAKSVYPFLDKDPALAIPPACPLHPELDVFKDQELHKRSVPGKSDTFHCGYCQKQFKTEFYMDRHMDNKHADRLDLAESDAIGHGIETAPGRCLGDLCPELGCGDYAADS 129
            A+ + CSRE SR A KII K + PF++K+    I  +C LHPE D+++DQE HK  +    + + CGYC+K F  E Y+D+H DN+H   L++++            GRCL D+C  L C D   DS
Sbjct:   12 AHEVHCSRERSRAAWKIIEKYLMPFVEKE-KYQISISCRLHPENDLYRDQEQHK--LHEDINEWRCGYCKKTFYDEKYLDKHFDNRHYHLLNVSQ------------GRCLADVCGALHC-DQVMDS 122          
BLAST of mRNA_Ecto-sp13_S_contig1486.3703.1 vs. uniprot
Match: A0A445AAG2_ARAHY (C2H2-type domain-containing protein n=3 Tax=Arachis TaxID=3817 RepID=A0A445AAG2_ARAHY)

HSP 1 Score: 92.0 bits (227), Expect = 3.060e-19
Identity = 49/119 (41.18%), Postives = 74/119 (62.18%), Query Frame = 0
Query:    4 NNISCSREHSRQARKIIAKSVYPFLDKDPALAIPPACPLHPELDVFKDQELHKRSVPGKSDTFHCGYCQKQFKTEFYMDRHMDNKHADRLDLAESDAIGHGIETAPGRCLGDLCPELGC 122
            + + CSRE SR ARK+I + + PFL+++    +   C LHPE D+F+DQE HK  + G  D + CGYC+K F+ E ++D+H DN+H++ L+L++            G+CL DLC  L C
Sbjct:   52 HEVHCSRERSRAARKVIEEYLTPFLEQE-NYQLSSKCRLHPENDMFRDQEEHKICL-GFHD-WKCGYCKKSFRDEKFLDQHFDNRHSNHLNLSD------------GKCLADLCGALHC 155          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1486.3703.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXP7_ECTSI2.010e-12292.97C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KY37_9PHAE2.560e-12293.51C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A2K3P9Z1_TRIPR8.140e-2133.69Nucleic acid binding protein (Fragment) n=1 Tax=Tr... [more]
A0A7C9EA33_OPUST6.850e-2040.16C2H2-type domain-containing protein n=1 Tax=Opunti... [more]
UPI000B8CE3788.050e-2041.32uncharacterized protein LOC110808992 n=1 Tax=Caric... [more]
A0A2C9UGA0_MANES1.600e-1940.94C2H2-type domain-containing protein n=2 Tax=Maniho... [more]
A0A5N5JU54_9ROSI1.640e-1942.06C2H2-type domain-containing protein n=1 Tax=Salix ... [more]
A0A6A6MSJ6_HEVBR2.500e-1940.94C2H2-type domain-containing protein n=1 Tax=Hevea ... [more]
A0A6A6MRH3_HEVBR2.730e-1940.94C2H2-type domain-containing protein n=1 Tax=Hevea ... [more]
A0A445AAG2_ARAHY3.060e-1941.18C2H2-type domain-containing protein n=3 Tax=Arachi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.60coord: 48..100
e-value: 1.6E-5
score: 26.8
NoneNo IPR availablePANTHERPTHR21385ZINC FINGER PROTEIN-RELATEDcoord: 3..182
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 68..89
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 66..94
score: 8.808
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 60..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1486contigEcto-sp13_S_contig1486:13583..16945 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1486.3703.1mRNA_Ecto-sp13_S_contig1486.3703.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1486 13583..16945 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1486.3703.1 ID=prot_Ecto-sp13_S_contig1486.3703.1|Name=mRNA_Ecto-sp13_S_contig1486.3703.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=185bp
MSANNISCSREHSRQARKIIAKSVYPFLDKDPALAIPPACPLHPELDVFK
DQELHKRSVPGKSDTFHCGYCQKQFKTEFYMDRHMDNKHADRLDLAESDA
IGHGIETAPGRCLGDLCPELGCGDYAADSCSVEIHAGGGSSLDAGAETIR
RGCGACDPADMERRRRRCRALFHGCFDDSNGSAGS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf