prot_Ecto-sp13_S_contig14842.3694.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14842.3694.1
Unique Nameprot_Ecto-sp13_S_contig14842.3694.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length647
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14842.3694.1 vs. uniprot
Match: D8LS44_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS44_ECTSI)

HSP 1 Score: 706 bits (1821), Expect = 7.400e-244
Identity = 490/669 (73.24%), Postives = 507/669 (75.78%), Query Frame = 0 
Query:    1 MGCPFGPAIDVWGVGVLLLELLLGRPLFDTAGSRVALKYPTILRVHRSPHPRSRLRSRLLACPPIYSLLMRQAGIPRANSGDEHMRMGCCSCCWIGVRRSPDEDPDVSSCDGCCALRCRRLSDMRGDGSVTPLAAAAAGRRGLGPPAGSTGCSSSEACISRLIGAPLPXXXXXXXXXXXXXXXXXXXXXXXEHHLRHRQRSNQPRLARPKPRRPPSATSAVAGQKNERLLSLISGLLRYDPDERLTPAQALAHPFFGETLPFAVLPPTAVAPGLGQTSGGGGRGAAAARCRTAEPTALAKGRHHGDRRQXXXXXXXXXXXXXXXXXXXXXXXX--ARRRSLPDGSCGVDNSWQRARHEEATTSTCRSGS-------------VDAGAARASPARVVSTTTPSRRHDDV-AGSRSNGTSSVPPRPTGNSSGAANSREAAEPTAQLQQLAEMAEVIVKDNSRYSRDRAGGIGNXXXXXXXXXXXQAP----RRNRFLNVERFASLKRESLPAEPEVPAVSGTPTEEQRHHAQPPPAGATSGRRRPNRFLTPATLAILKPSLGVTRRQNADDIAAAAAEGAWATSKAAT-SEA-EVDKAGANSGLCAQRTASASTTKATSPPLAHQDPSSMEKVQRLPWETPGEAAGREPVVVARREPEGGGVKPAAAPNEQ 647
            MGCPFGPA+DVWGVGV+LLELLLGRPLFDTAGSRVAL + T+  +   P P  R R            +  QAGIP ANSGDEHMRMGCCSCCWIGVRRSPDEDPDVSSCDGCCALRCRRLSDMRGDGS  PLAAAAAGRRGLGPPAGSTGCSSSEACISRLIGAP  XXXXXXXXXXXXXXXXXXXXXXX     HRQ SN PRLARPKPRRPPSAT+AVAGQKN+RLLSLISGLLRYDPDERLTPAQALAHPFFGETLPF VLPPTAVAPGLGQTSG                              XXXXXXXXXXXXXXXXXXXXXXXX  ARRRSLPDG+  VDN WQRARHEEATTST RSG              VDAGAARASPARVVS  TPSRRHDD  AGSR+NGTS VPPRPTG+SSGA+NS+E AEPTAQLQQLAEMAEVI+KDNSRYSR RAGG   XXXXXXXXXXX       RRNRFLN ERFASLKRES PAEPEVPAVSGTPTEEQR          T GRRRPNRFLTPATLAILKP LGVTRRQ+AD                   SEA EVDKAG  SGLCAQRT             AHQDPSSMEKV+RL WETPGEAA RE VV A REPE G VKPAAAP+ Q
Sbjct:  139 MGCPFGPAVDVWGVGVILLELLLGRPLFDTAGSRVALVHQTVCAL--GPMPLRRFRVGHYFSEYFPKGMSLQAGIPTANSGDEHMRMGCCSCCWIGVRRSPDEDPDVSSCDGCCALRCRRLSDMRGDGSAAPLAAAAAGRRGLGPPAGSTGCSSSEACISRLIGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRQHSNHPRLARPKPRRPPSATTAVAGQKNKRLLSLISGLLRYDPDERLTPAQALAHPFFGETLPFEVLPPTAVAPGLGQTSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPARRRSLPDGNGVVDNGWQRARHEEATTSTHRSGRTTTKSPEISSSGRVDAGAARASPARVVSMATPSRRHDDNDAGSRTNGTSDVPPRPTGSSSGASNSKEEAEPTAQLQQLAEMAEVIIKDNSRYSRGRAGGTXXXXXXXXXXXXXXXXXXXXRRNRFLNAERFASLKRESSPAEPEVPAVSGTPTEEQRXXXXXXXXXXTRGRRRPNRFLTPATLAILKPDLGVTRRQHADXXXXXXXXXXXXXXXXXXXSEAREVDKAGGYSGLCAQRTXXXXXXXXXXXXAAHQDPSSMEKVKRLSWETPGEAARREAVVAATREPEDGRVKPAAAPSVQ 805
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BLAST of mRNA_Ecto-sp13_S_contig14842.3694.1 vs. uniprot
Match: A0A835YK57_9STRA (Protein kinase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK57_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 6.860e-6
Identity = 26/48 (54.17%), Postives = 32/48 (66.67%), Query Frame = 0 
Query:    2 GCPFGPAIDVWGVGVLLLELLLGRPLFDTAGSRVALKYPTILRVHRSP 49
            GCPFG   D++ +GVLLLE +LGRPLF TA SRV L   T   +  +P
Sbjct:   24 GCPFGTPADMYSLGVLLLEAVLGRPLFRTASSRVGLAIQTACALGAAP 71
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14842.3694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LS44_ECTSI7.400e-24473.24N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A835YK57_9STRA6.860e-654.17Protein kinase domain-containing protein (Fragment... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.510.10coord: 1..76
e-value: 4.5E-6
score: 28.5
NoneNo IPR availableGENE3D1.10.510.10coord: 157..259
e-value: 5.5E-8
score: 34.6
NoneNo IPR availablePANTHERPTHR24058DUAL SPECIFICITY PROTEIN KINASEcoord: 222..414
NoneNo IPR availablePANTHERPTHR24058:SF17HOMEODOMAIN INTERACTING PROTEIN KINASE, ISOFORM Acoord: 222..414
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.669
IPR000719Protein kinase domainPROSITEPS50011PROTEIN_KINASE_DOMcoord: 1..256
score: 10.577
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 1..270

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14842contigEcto-sp13_S_contig14842:1557..4318 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14842.3694.1mRNA_Ecto-sp13_S_contig14842.3694.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14842 1551..4318 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14842.3694.1 ID=prot_Ecto-sp13_S_contig14842.3694.1|Name=mRNA_Ecto-sp13_S_contig14842.3694.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=647bp
MGCPFGPAIDVWGVGVLLLELLLGRPLFDTAGSRVALKYPTILRVHRSPH
PRSRLRSRLLACPPIYSLLMRQAGIPRANSGDEHMRMGCCSCCWIGVRRS
PDEDPDVSSCDGCCALRCRRLSDMRGDGSVTPLAAAAAGRRGLGPPAGST
GCSSSEACISRLIGAPLPPPPQQQQAPAAAGHAAAAALSASEHHLRHRQR
SNQPRLARPKPRRPPSATSAVAGQKNERLLSLISGLLRYDPDERLTPAQA
LAHPFFGETLPFAVLPPTAVAPGLGQTSGGGGRGAAAARCRTAEPTALAK
GRHHGDRRQPPEPQPTGAAASLVAASQRQEEEPARRRSLPDGSCGVDNSW
QRARHEEATTSTCRSGSVDAGAARASPARVVSTTTPSRRHDDVAGSRSNG
TSSVPPRPTGNSSGAANSREAAEPTAQLQQLAEMAEVIVKDNSRYSRDRA
GGIGNGNGNGSAPASAQAPRRNRFLNVERFASLKRESLPAEPEVPAVSGT
PTEEQRHHAQPPPAGATSGRRRPNRFLTPATLAILKPSLGVTRRQNADDI
AAAAAEGAWATSKAATSEAEVDKAGANSGLCAQRTASASTTKATSPPLAH
QDPSSMEKVQRLPWETPGEAAGREPVVVARREPEGGGVKPAAAPNEQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000719Prot_kinase_dom
IPR011009Kinase-like_dom_sf