prot_Ecto-sp13_S_contig14837.3688.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig14837.3688.1
Unique Name	prot_Ecto-sp13_S_contig14837.3688.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	112

Homology

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BLAST of mRNA_Ecto-sp13_S_contig14837.3688.1 vs. uniprot
Match: A0A6H5KXF6_9PHAE (YjgF_endoribonc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXF6_9PHAE)

HSP 1 Score: 213 bits (543), Expect = 4.710e-69
Identity = 109/111 (98.20%), Postives = 110/111 (99.10%), Query Frame = 0

Query:    1 MTPEGVLLTGTVGDNITEEEGVAAAHLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGYAGQPTILNGASDLLAEAFGEKGIHARSAVGMSSMPLDIPVELEAIVEVE 111
            MTPEGVLLTGTVGD+ITEEEGVAAAHLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGY GQPTILNGASDLLAEAFGEKGIHARSAVGMSSMPLDIPVELEAIVEVE
Sbjct:   69 MTPEGVLLTGTVGDSITEEEGVAAAHLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGYTGQPTILNGASDLLAEAFGEKGIHARSAVGMSSMPLDIPVELEAIVEVE 179

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BLAST of mRNA_Ecto-sp13_S_contig14837.3688.1 vs. uniprot
Match: K3WJH4_GLOUD (YjgF_endoribonc domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJH4_GLOUD)

HSP 1 Score: 143 bits (361), Expect = 1.380e-41
Identity = 69/107 (64.49%), Postives = 87/107 (81.31%), Query Frame = 0

Query:    5 GVLLTGTVGDNITEEEGVAAAHLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGYAGQPTILNGASDLLAEAFGEKGIHARSAVGMSSMPLDIPVELEAIVEVE 111
            G L+TG VG ++T EEG  AAH V L++LATLK +LGDLD + RIVKL G+V CVDG+AGQP ++NGASD LAE FG KG HARSAVG +++P+++ VE+EAIVEVE
Sbjct:   47 GELITGKVGKDLTPEEGYVAAHRVVLSLLATLKKELGDLDHIKRIVKLTGFVNCVDGFAGQPAVINGASDALAEIFGAKGKHARSAVGTNALPVNVAVEIEAIVEVE 153

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BLAST of mRNA_Ecto-sp13_S_contig14837.3688.1 vs. uniprot
Match: A0A4D9CNR0_9STRA (YjgF_endoribonc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNR0_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.220e-40
Identity = 67/111 (60.36%), Postives = 90/111 (81.08%), Query Frame = 0

Query:    1 MTPEGVLLTGTVGDNITEEEGVAAAHLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGYAGQPTILNGASDLLAEAFGEKGIHARSAVGMSSMPLDIPVELEAIVEVE 111
            +   GVL+TG VG + + EEG  AA ++A+N+LATLK +LGDLD+V RIVKL G+V CVDG++ QP ++NGASD   + FG+KG+HARSAVG +++PL+IPVE+EAIVEVE
Sbjct:   43 LLKSGVLMTGKVGADKSLEEGQEAAQVIAINLLATLKSELGDLDKVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVE 153

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BLAST of mRNA_Ecto-sp13_S_contig14837.3688.1 vs. uniprot
Match: A0A2D4BR11_PYTIN (Endoribonuclease L-PSP, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR11_PYTIN)

HSP 1 Score: 140 bits (353), Expect = 2.780e-40
Identity = 64/107 (59.81%), Postives = 89/107 (83.18%), Query Frame = 0

Query:    5 GVLLTGTVGDNITEEEGVAAAHLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGYAGQPTILNGASDLLAEAFGEKGIHARSAVGMSSMPLDIPVELEAIVEVE 111
            G L+ G +G ++T EEG  AAH +AL+++ATLK++LGDLD+V RIVKL G+V CVDG+ GQP ++NGASD + + FG+KGIHARSAVG +++PL++ VE+EAIVE+E
Sbjct:   63 GDLIVGKIGKDLTPEEGYDAAHHIALSLMATLKHELGDLDKVKRIVKLVGFVNCVDGFTGQPGVINGASDTIGKVFGDKGIHARSAVGTNALPLNVAVEIEAIVEIE 169

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BLAST of mRNA_Ecto-sp13_S_contig14837.3688.1 vs. uniprot
Match: A0A8K1FK53_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FK53_PYTOL)

HSP 1 Score: 140 bits (352), Expect = 3.830e-40
Identity = 64/107 (59.81%), Postives = 89/107 (83.18%), Query Frame = 0

Query:    5 GVLLTGTVGDNITEEEGVAAAHLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGYAGQPTILNGASDLLAEAFGEKGIHARSAVGMSSMPLDIPVELEAIVEVE 111
            G L+ G +G ++T E+G  AAH VAL+++ATLK++LGDLD+V RIVKL G+V CVDG+ GQP ++NGASD + + FGEKG+HARSAVG +++PL++ VE+EAIVE+E
Sbjct:   62 GDLIVGKIGKDLTPEQGYDAAHHVALSLIATLKHELGDLDKVKRIVKLVGFVNCVDGFTGQPGVINGASDTIGKVFGEKGVHARSAVGTNALPLNVAVEVEAIVEIE 168

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BLAST of mRNA_Ecto-sp13_S_contig14837.3688.1 vs. uniprot
Match: K3WLZ8_GLOUD (YjgF_endoribonc domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLZ8_GLOUD)

HSP 1 Score: 139 bits (351), Expect = 5.760e-40
Identity = 64/107 (59.81%), Postives = 89/107 (83.18%), Query Frame = 0

Query:    5 GVLLTGTVGDNITEEEGVAAAHLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGYAGQPTILNGASDLLAEAFGEKGIHARSAVGMSSMPLDIPVELEAIVEVE 111
            G L+ G +G ++T E+G  AAH VAL+++ATLK++LGDLD+V RIVKL G+V CVDG+ GQP ++NGASD + + FG+KGIHARSAVG +++PL++ VE+EAIVE+E
Sbjct:   64 GDLIVGKIGKDLTPEDGYDAAHHVALSLMATLKHELGDLDKVKRIVKLVGFVNCVDGFTGQPGVINGASDTIGKVFGDKGIHARSAVGTNALPLNVAVEIEAIVEIE 170

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BLAST of mRNA_Ecto-sp13_S_contig14837.3688.1 vs. uniprot
Match: A0A485LQZ5_9STRA (Aste57867_24668 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQZ5_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.080e-39
Identity = 63/109 (57.80%), Postives = 90/109 (82.57%), Query Frame = 0

Query:    2 TPEGVLLTGTVGDNITEEEGVAAAHLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGYAGQPTILNGASDLLAEAFGEKGIHARSAVGMSSMPLDIPVELEAIVEV 110
            T +G L+TG VG  +T E+   AAH+VAL++LATLK++LGDL+++ +IVKL G+V CVDG+A QPT++NGASD  A+ FG+ G+ +RSAVG +++PL++PVE+EAIVEV
Sbjct:   44 TADGTLITGKVGKEVTTEQAYDAAHVVALSLLATLKHELGDLNKIKQIVKLTGFVNCVDGFAAQPTVINGASDTFAKVFGDIGVGSRSAVGTNALPLNVPVEIEAIVEV 152

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BLAST of mRNA_Ecto-sp13_S_contig14837.3688.1 vs. uniprot
Match: A0A662WS90_9STRA (YjgF_endoribonc domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WS90_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.090e-39
Identity = 63/107 (58.88%), Postives = 89/107 (83.18%), Query Frame = 0

Query:    5 GVLLTGTVGDNITEEEGVAAAHLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGYAGQPTILNGASDLLAEAFGEKGIHARSAVGMSSMPLDIPVELEAIVEVE 111
            G ++TG VG ++T+EEG  AAH VAL+++ATLK ++GDLD++ R+VKL G+V CVDG+  QP ++NGASD + + FG+KGIHARSAVG +++PL++ VE+EAIVEVE
Sbjct:   98 GDIITGKVGKDLTQEEGYDAAHYVALSLMATLKQEVGDLDKIKRVVKLVGFVNCVDGFTAQPAVINGASDTIGKVFGDKGIHARSAVGTNALPLNVAVEIEAIVEVE 204

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BLAST of mRNA_Ecto-sp13_S_contig14837.3688.1 vs. uniprot
Match: A0A5D6Y6K1_9STRA (YjgF_endoribonc domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6K1_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.840e-39
Identity = 66/111 (59.46%), Postives = 85/111 (76.58%), Query Frame = 0

Query:    1 MTPEGVLLTGTVGDNITEEEGVAAAHLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGYAGQPTILNGASDLLAEAFGEKGIHARSAVGMSSMPLDIPVELEAIVEVE 111
            M+  G L+ G VG ++T EEG  AAH V L++LATLK +LGDLD + R VKL G+V CVDG+A QP ++NGASD L E FG KG HARSAVG +++P+++ VE+EAIVEVE
Sbjct:   43 MSASGELIKGKVGQDLTPEEGYKAAHRVVLSLLATLKNELGDLDHIKRFVKLTGFVNCVDGFASQPAVINGASDALVEIFGAKGKHARSAVGTNALPVNVAVEIEAIVEVE 153

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BLAST of mRNA_Ecto-sp13_S_contig14837.3688.1 vs. uniprot
Match: A0A4D9CNR9_9STRA (YjgF_endoribonc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNR9_9STRA)

HSP 1 Score: 138 bits (348), Expect = 2.400e-39
Identity = 66/107 (61.68%), Postives = 87/107 (81.31%), Query Frame = 0

Query:    5 GVLLTGTVGDNITEEEGVAAAHLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGYAGQPTILNGASDLLAEAFGEKGIHARSAVGMSSMPLDIPVELEAIVEVE 111
            G LLTG VG  ++ EE   AA L+ALN+L++LK ++GDLDRV RIVKL G+V CVDG++ QP ++NGASD   + FG+KG+HARSAVG +++PL+IPVE+EAIVEVE
Sbjct:   77 GQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKEVGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVE 183

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig14837.3688.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig14837.3688.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KXF6_9PHAE	4.710e-69	98.20	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
K3WJH4_GLOUD	1.380e-41	64.49	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]
A0A4D9CNR0_9STRA	1.220e-40	60.36	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A2D4BR11_PYTIN	2.780e-40	59.81	Endoribonuclease L-PSP, putative n=1 Tax=Pythium i...	[more]
A0A8K1FK53_PYTOL	3.830e-40	59.81	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
K3WLZ8_GLOUD	5.760e-40	59.81	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]
A0A485LQZ5_9STRA	1.080e-39	57.80	Aste57867_24668 protein n=1 Tax=Aphanomyces stella...	[more]
A0A662WS90_9STRA	1.090e-39	58.88	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A5D6Y6K1_9STRA	1.840e-39	59.46	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]
A0A4D9CNR9_9STRA	2.400e-39	61.68	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like	PFAM	PF14588	YjgF_endoribonc	coord: 6..108 e-value: 3.2E-26 score: 92.2
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 1..110 e-value: 1.0E-42 score: 147.1
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 2..110
None	No IPR available	PANTHER	PTHR43760	FAMILY NOT NAMED	coord: 3..111

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig14837	contig	Ecto-sp13_S_contig14837:1777..4033 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig14837.3688.1	mRNA_Ecto-sp13_S_contig14837.3688.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig14837 1015..4094 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig14837.3688.1 ID=prot_Ecto-sp13_S_contig14837.3688.1|Name=mRNA_Ecto-sp13_S_contig14837.3688.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=112bp
MTPEGVLLTGTVGDNITEEEGVAAAHLVALNMLATLKYQLGDLDRVARIV
KLNGYVQCVDGYAGQPTILNGASDLLAEAFGEKGIHARSAVGMSSMPLDI
PVELEAIVEVE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013813	Endoribo_LPSP/chorism_mut-like
IPR035959	RutC-like_sf