prot_Ecto-sp13_S_contig14836.3687.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14836.3687.1
Unique Nameprot_Ecto-sp13_S_contig14836.3687.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length199
Homology
BLAST of mRNA_Ecto-sp13_S_contig14836.3687.1 vs. uniprot
Match: D8LSU0_ECTSI (Similar to helicase, lymphoid-specific isoform 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSU0_ECTSI)

HSP 1 Score: 354 bits (909), Expect = 1.020e-113
Identity = 192/200 (96.00%), Postives = 193/200 (96.50%), Query Frame = 0
Query:    1 LCSGTPVQNNLGELLALLSFLMPEIFRSDVIETLLEFLGNNADEQASSSSS-FQVREVRGMLAPFVLRRLKSDVLKQLVAKNESLEKVPLSKVAKEVSGYSDFDLHQVCSGFDSLKHLCLSEETLFTSAKMERLRTLLPQLVSEGHRILLFSQWTRLLDLLEASAHVLLGDSMGMTFCRLDGSTPVSERKALIDKFGADT 199
            L SGTPVQNNLGELLALLSFLMPEIFRSDVIETLLEFLGNNADEQASSSSS FQVREVRGMLAPFVLRRLKSDVLKQLVAKNESLEKVPLSKVAKEVSGYSDFDLHQVCSGFDSLKHLCLSEETLFTSAKMERLR LLPQLVSEGHRILLFSQWTRLLDLLE    VLLG+SMGMTFCRLDGSTPVSERKALIDKFGADT
Sbjct:  636 LLSGTPVQNNLGELLALLSFLMPEIFRSDVIETLLEFLGNNADEQASSSSSSFQVREVRGMLAPFVLRRLKSDVLKQLVAKNESLEKVPLSKVAKEVSGYSDFDLHQVCSGFDSLKHLCLSEETLFTSAKMERLRALLPQLVSEGHRILLFSQWTRLLDLLE----VLLGESMGMTFCRLDGSTPVSERKALIDKFGADT 831          
BLAST of mRNA_Ecto-sp13_S_contig14836.3687.1 vs. uniprot
Match: A0A6H5KRD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRD4_9PHAE)

HSP 1 Score: 309 bits (791), Expect = 7.400e-95
Identity = 197/361 (54.57%), Postives = 198/361 (54.85%), Query Frame = 0
Query:    1 LCSGTPVQNNLGELLALLSFLMPEIFRSDVIETLLEFLGNNADEQASSSSSFQVREVRGMLAPFVLRRLKSDVLKQLVAKNESLEKVPLSKV------------------------------------------------------------------------------------------------------------------------------------------------------------------AKEVSGYSDFDLHQVCSGFDSLKHLCLSEETLFTSAKMERLRTLLPQLVSEGHRILLFSQWTRLLDLLEASAHVLLGDSMGMTFCRLDGSTPVSERKALIDKFGADT 199
            L SGTPVQNNLGELLALLSFLMPEIFRSDVIETLLEFLGNNADEQASSSSSFQVREVRGMLAPFVLRRLKSDVLKQLVAKNESLEKVPLSKV                                                                                                                                                                  AKEVSGYSDFDLHQVCSGFDSLKHLCLSEETLFTSAKMERLRTLLPQLVSEGHR+LLFSQWTRLLDLLEASAHVLLGDSMGMTFCRLDGSTPVSERKALIDKFGADT
Sbjct:  739 LLSGTPVQNNLGELLALLSFLMPEIFRSDVIETLLEFLGNNADEQASSSSSFQVREVRGMLAPFVLRRLKSDVLKQLVAKNESLEKVPLSKVQRSLYDGVLENHVRQKRAAIERALAQERALFGGGTVTDLTSNVTRSXXXXXXXXXXXXXXXXXXXXXXXXXGDGDAIEILDDGVAGRRSGGHAGGEEGEADLLEEVGISAKECKNIFTELRKGANHPLMLLNHFKGGGKMEKVVEVLHRTGYFGGQATKDMVAKEVSGYSDFDLHQVCSGFDSLKHLCLSEETLFTSAKMERLRTLLPQLVSEGHRVLLFSQWTRLLDLLEASAHVLLGDSMGMTFCRLDGSTPVSERKALIDKFGADT 1099          
BLAST of mRNA_Ecto-sp13_S_contig14836.3687.1 vs. uniprot
Match: A0A835Z3Y7_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Y7_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.000e-38
Identity = 113/323 (34.98%), Postives = 147/323 (45.51%), Query Frame = 0
Query:    1 LCSGTPVQNNLGELLALLS----------------------------FLMPEIFRSDVIETLLEFL------GNNADEQASSSSSFQVREVRGMLAPFVLRRLKSDVLKQLVAKNESLEKVPLSK-------------------------------------------------------------------------------------------VAKEVSGYSDFDLHQVCSGFDSLKHLCLSEETLFTSAKMERLRTLLPQLVSEGHRILLFSQWTRLLDLLEASAHVLLGDSMGMTFCRLDGSTPVSERKALIDKFGAD 198
            L SGTPVQNNL ELLALL                             FLMP++FR+D +  LLE L      G +A       +  +V +VRGML+PFVLRRLKS VL+QLV K   ++ +PL                                                                                             V KE+  +SD+D+HQ+CS F +L+ L L ++ LF+SAKM RLR LLP+L ++GHR+LLFSQWTR+LDL+E    V L + +GM + RLDGSTPV +R+ALI  F AD
Sbjct:  734 LLSGTPVQNNLKELLALLRSLMPEAFSCGRAPGVLMFRMCCLLALLMFLMPKVFRADAVLNLLEMLEEGMSNGGSAHRGRGGLALPRVADVRGMLSPFVLRRLKSAVLEQLVPKTTDVDVLPLGDMQKQLYDGILKAHLKRKGGGVKGDAAEDTNAVVAAIVGSTTEAKNVFTELRKAANHPLLLLHHYKDDATISRIVEVAYGAAYFGDAATPQMVRKELETFSDYDMHQLCSHFPALEDLTLQQDALFSSAKMVRLRGLLPELQAQGHRVLLFSQWTRILDLME----VFLSEVLGMRYTRLDGSTPVQQRQALIQGFAAD 1052          
BLAST of mRNA_Ecto-sp13_S_contig14836.3687.1 vs. uniprot
Match: L1I6R2_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I6R2_GUITC)

HSP 1 Score: 138 bits (348), Expect = 2.470e-35
Identity = 90/224 (40.18%), Postives = 122/224 (54.46%), Query Frame = 0
Query:    1 LCSGTPVQNNLGELLALLSFLMPEIFRSD---------VIETLLEFLGNNADEQASSSSSFQVREVRGMLAPFVLRRLKSDVLKQLVAKNESLEKVPLSKVAKEVSGYSDFDLHQVCSGFDSLKHLCLSEETLF----------------TSAKMERLRTLLPQLVSEGHRILLFSQWTRLLDLLEASAHVLLGDSMGMTFCRLDGSTPVSERKALIDKFGADT 199
            L +GTP+ NNL ELL LL FLMPE+F  D         +    +   G +      S     V  V+ M+ PFVLRR K DVL +LV K++ +       + KE+S YSDF LHQ+C     L  L L  +++F                +SAK+ +L  +LP+L SEGHR+LLFSQWT +LD++E      L D     + RLDGST V ER+ L+D+F +DT
Sbjct:  185 LLTGTPINNNLPELLVLLQFLMPELFDPDDEVESESGNLARVKMRQKGCSCSHLLLSHQKVNVERVKKMIKPFVLRRCKCDVLGELVPKDQQV-------IQKEISDYSDFVLHQMCQDHKRLNKLSLKVQSIFPAIRPSHLFVQPEDISSSAKLRKLEEILPRLQSEGHRVLLFSQWTTMLDIIED----FLIDK-DYLYTRLDGSTAVKERQELLDRFNSDT 396          
BLAST of mRNA_Ecto-sp13_S_contig14836.3687.1 vs. uniprot
Match: A0A7S0H4N3_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0H4N3_9CRYP)

HSP 1 Score: 131 bits (329), Expect = 8.550e-32
Identity = 99/291 (34.02%), Postives = 130/291 (44.67%), Query Frame = 0
Query:    1 LCSGTPVQNNLGELLALLSFLMPEIFRSDVIETLLEFLGNNADEQASS-SSSFQVREVRGMLAPFVLRRLKSDVLKQLVAKNE-----------------------------------------SLEKVPLSK--------------------------------------------------VAKEVSGYSDFDLHQVCSGFDSLKHLCLSEETLFTSAKMERLRTLLPQLVSEGHRILLFSQWTRLLDLLEASAHVLLGDSMGMTFCRLDGSTPVSERKALIDKFGADT 199
            L +GTP+ NNL ELL LL FLMPE+F  D  ETL E      + ++ + +    V  V+ M+ PFVLRR K DVL +LV K++                                         S+EK  +SK                                                  V KE+S YSDF LHQ+C     L HL L  + +  SAK+ +L  +LPQL SEGHR+LLFSQWT +LD++E      L D     + RLDGST V ER+ L+D+F +DT
Sbjct:  417 LLTGTPINNNLPELLVLLQFLMPELFDPDD-ETLWEVFDEKVESESGNLARKVNVGRVKKMIKPFVLRRCKCDVLGELVPKDQQVIQLNLPEVQRRVYNQIISNWELKSKKLTADSSGGSRTTRSIEKAAMSKKMINNIFCELRKAANHPLLVRSRYNDEALKKIAHQLYVNGHFGNSCTLQQVEKEISDYSDFVLHQMCQDHKKLNHLSLKPQDIAASAKLRKLEEILPQLQSEGHRVLLFSQWTTMLDIIEE----FLNDK-DYLYMRLDGSTAVKERQELLDRFNSDT 701          
BLAST of mRNA_Ecto-sp13_S_contig14836.3687.1 vs. uniprot
Match: A0A7S4UGD6_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4UGD6_GUITH)

HSP 1 Score: 125 bits (315), Expect = 5.660e-30
Identity = 97/288 (33.68%), Postives = 130/288 (45.14%), Query Frame = 0
Query:    1 LCSGTPVQNNLGELLALLSFLMPEIFRSDVIETLLEFLGNNADEQASS-SSSFQVREVRGMLAPFVLRRLKSDVLKQLVAKNESL--------------------------------------EKVPLSK--------------------------------------------------VAKEVSGYSDFDLHQVCSGFDSLKHLCLSEETLFTSAKMERLRTLLPQLVSEGHRILLFSQWTRLLDLLEASAHVLLGDSMGMTFCRLDGSTPVSERKALIDKFGADT 199
            L +GTP+ NNL ELL LL FLMPE+F  D  ETL E      + ++ + +    V  V+ M+ PFVLRR K DVL +LV K++ +                                      +KV +SK                                                  V KE+S YSDF LHQ+C     L  L L  E + +SAK+ +L  +LP+L SEGHR+LLFSQWT +LD++E      L D     + RLDGST V ER+ L+D+F +DT
Sbjct:  283 LLTGTPINNNLPELLVLLQFLMPELFDPDD-ETLWEVFDEKVESESGNLARKVNVERVKKMIKPFVLRRCKCDVLGELVPKDQQVIQLDLPSEQRKVYNQIISNWEFKSKKDSSGGNTNAKAGDKVAMSKKMINNIFCELRKAANHPLLVRSRYNDEALKTIAHQLFVSGHFGNSCSLQQVEKEISDYSDFVLHQMCQDHKRLNKLSLKPEDISSSAKLRKLEEILPRLQSEGHRVLLFSQWTTMLDIIED----FLIDK-DYLYTRLDGSTAVKERQELLDRFNSDT 564          
BLAST of mRNA_Ecto-sp13_S_contig14836.3687.1 vs. uniprot
Match: E4X2S0_OIKDI (Uncharacterized protein n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4X2S0_OIKDI)

HSP 1 Score: 116 bits (291), Expect = 1.120e-26
Identity = 85/234 (36.32%), Postives = 125/234 (53.42%), Query Frame = 0
Query:    1 LCSGTPVQNNLGELLALLSFLMPEIFR--SDVIETLLEFLGNNADEQASSSSSFQVREVRGMLAPFVLRRLKSDVLKQLVAK-----------------NE--SLEKVPLSKVAKEVSGY--------------SDFDLHQVCSGFDSLKHLCLSEETLFTSAKMERLRTLLPQLVSEGHRILLFSQWTRLLDLLEASAHVLLGDSMGMTFCRLDGSTPVSERKALIDKFGADT 199
            L +GTP+QNNL EL++L+ FLMP++ +  S+ ++ + + L N   E A      +V E R +L PF+LRR+KS+VLK L  K                 NE   L +  LS   K+  G               SDF +H+ C  + SLK   L ++ +  S K + L TLLP+L  EGHR+LLFSQ+  ++D++E         +  + + RLDGSTPV +R  +ID F AD+
Sbjct:  594 LLTGTPLQNNLLELVSLIKFLMPDLLQKSSNTLQRIFK-LRNQESEFAKK----RVAEARTILQPFILRRVKSEVLKDLPPKISEEVLVELTDNQKIFYNEIKGLLQCKLSTTEKKEQGIRDITNSFIQLRKCLSDFQIHETCEKYASLKKFRLKKDDILNSGKFKVLDTLLPKLFEEGHRVLLFSQFVIMMDIMERYM-----TARKIKYMRLDGSTPVEDRLDMIDTFNADS 817          
BLAST of mRNA_Ecto-sp13_S_contig14836.3687.1 vs. uniprot
Match: A0A2R5GFW3_9STRA (Helicase, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GFW3_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.510e-26
Identity = 93/292 (31.85%), Postives = 132/292 (45.21%), Query Frame = 0
Query:    1 LCSGTPVQNNLGELLALLSFLMPEIFRSDVIETLLEFLGNNADEQASSSSSFQVREVRGMLAPFVLRRLKSDVLKQLVAKNESLEKVPLSKVA------------------------------------------------------------------------------------------KEVSGYSDFDLHQVCSGFDS----LKHLCLSEETLFTSAKMERLRTLLPQLVSEGHRILLFSQWTRLLDLLEASAHVLLGDSMGMTFCRLDGSTPVSERKALIDKFGAD 198
            L SGTPVQNNL ELLAL+SF MP++F +   E L ++  N+AD +  +S    +  +R  + PFVLRRLK+DVL QL  K E ++ + ++ V                                                                                           KE+  YSD+D H +   F S    L+ + L +E L+TS+K  RLR LLP+LV E HR L+FSQWT LLD++E     +LG ++ +TF R DGST + +R+ +ID +  D
Sbjct:  544 LLSGTPVQNNLQELLALMSFCMPKVFNASS-ERLTDYF-NDADNRGQAS----IARIRDAMRPFVLRRLKADVLGQLSPKIEDVQLLEMADVQRKVYSEIIDAYRQKKSDARSGRRSRATDSATTHFFSQLRKAANHPLLVRQYFGKSAEDSPDGVSRPLPRFVELCDRVKAFGPAASVRMIEKEIKSYSDWDFHLLALEFGSRNAELRGMALPQEALWTSSKALRLRELLPKLVEEKHRFLIFSQWTTLLDVIEE----MLG-ALNITFVRFDGSTAIGDRQEIIDSYNTD 824          
BLAST of mRNA_Ecto-sp13_S_contig14836.3687.1 vs. uniprot
Match: A0A1V9YP31_9STRA (ATP-dependent helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YP31_9STRA)

HSP 1 Score: 115 bits (289), Expect = 2.040e-26
Identity = 94/304 (30.92%), Postives = 127/304 (41.78%), Query Frame = 0
Query:    3 SGTPVQNNLGELLALLSFLMPEIFRSDVIETLLEFLGNNADEQASSSSSFQVREVRGMLAPFVLRRLKSDVLKQLVAKNESLEKVPL-------------------------------------------------------------------------------------------------------SKVAKEVSGYSDFDLHQVCSGFDS----LKHLCLSEETLFTSAKMERLRTLLPQLVSEGHRILLFSQWTRLLDLLEASAHVLLGDSMGMTFCRLDGSTPVSERKALIDKFGADT 199
            SGTP+QNNL ELL+LLSFLMP IF     E +++F        A         ++R +L PF+LRRLK +VL Q+V K E    + L                                                                                                       + V KE+  YSDFDLH++C+ +      L+ L L   TL  S K + LR LLP L ++GHR+L+FSQWT+LLDL+E     +L   +G  F RLDGST V++R+A+ID+F  DT
Sbjct:  500 SGTPIQNNLSELLSLLSFLMPTIFNHGS-EQMMDFF-------AGEPQGATCTKIRHILGPFILRRLKKNVLLQMVPKTEHTHVLTLPPAQRAVYDELVAAAVAAKDGDKAKAAARKAGGHRGAKREVRALLNLEANIFDGQNDAAIFTQLRKAANHPILLRHHFRSPEKMDTLGAQLYQLGAFGNQCTRAMVDKEIESYSDFDLHELCAQYGDVSPELRALQLPVATLLDSVKFDHLRALLPPLHADGHRVLIFSQWTKLLDLIE-----VLMAHLGFKFLRLDGSTNVADRQAMIDEFNDDT 790          
BLAST of mRNA_Ecto-sp13_S_contig14836.3687.1 vs. uniprot
Match: A0A7S3US29_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3US29_HETAK)

HSP 1 Score: 111 bits (278), Expect = 2.360e-26
Identity = 58/107 (54.21%), Postives = 73/107 (68.22%), Query Frame = 0
Query:   89 LSKVAKEVSGYSDFDLHQVCSGFDSLKHLCLSEETLFTSAKMERLRTLLPQLVSEGHRILLFSQWTRLLDLLEASAHVLLGDSMGMTFCRLDGSTPVSERKALIDKF 195
            L+ V KE+ GYSD+DLH +C+    L    L E+T+  SAK  +L  LLPQ+  +GHR+LLFSQWTR+LDLLE    V L   +GM F RLDGST V  R+ALI+KF
Sbjct:   60 LAMVRKEIEGYSDYDLHHLCAQHPELGKYELGEDTIMNSAKFRKLEELLPQMQKDGHRVLLFSQWTRILDLLE----VFLQSRLGMGFLRLDGSTDVKSRQALIEKF 162          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14836.3687.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSU0_ECTSI1.020e-11396.00Similar to helicase, lymphoid-specific isoform 9 n... [more]
A0A6H5KRD4_9PHAE7.400e-9554.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z3Y7_9STRA1.000e-3834.98SNF2 family N-terminal domain-containing protein n... [more]
L1I6R2_GUITC2.470e-3540.18Uncharacterized protein (Fragment) n=1 Tax=Guillar... [more]
A0A7S0H4N3_9CRYP8.550e-3234.02Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S4UGD6_GUITH5.660e-3033.68Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
E4X2S0_OIKDI1.120e-2636.32Uncharacterized protein n=1 Tax=Oikopleura dioica ... [more]
A0A2R5GFW3_9STRA1.510e-2631.85Helicase, putative n=1 Tax=Hondaea fermentalgiana ... [more]
A0A1V9YP31_9STRA2.040e-2630.92ATP-dependent helicase n=1 Tax=Achlya hypogyna Tax... [more]
A0A7S3US29_HETAK2.360e-2654.21Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 3..96
e-value: 4.5E-13
score: 48.6
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 1..93
e-value: 5.0E-18
score: 66.8
NoneNo IPR availableGENE3D3.40.50.300coord: 121..197
e-value: 2.0E-16
score: 61.6
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 2..197
NoneNo IPR availablePANTHERPTHR10799:SF964SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A CONTAINING DEAD/H BOX 1coord: 2..197
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 129..196
e-value: 5.3E-5
score: 23.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..198
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14836contigEcto-sp13_S_contig14836:223..4318 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14836.3687.1mRNA_Ecto-sp13_S_contig14836.3687.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14836 223..4318 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14836.3687.1 ID=prot_Ecto-sp13_S_contig14836.3687.1|Name=mRNA_Ecto-sp13_S_contig14836.3687.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=199bp
LCSGTPVQNNLGELLALLSFLMPEIFRSDVIETLLEFLGNNADEQASSSS
SFQVREVRGMLAPFVLRRLKSDVLKQLVAKNESLEKVPLSKVAKEVSGYS
DFDLHQVCSGFDSLKHLCLSEETLFTSAKMERLRTLLPQLVSEGHRILLF
SQWTRLLDLLEASAHVLLGDSMGMTFCRLDGSTPVSERKALIDKFGADT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000330SNF2_N
IPR038718SNF2-like_sf
IPR001650Helicase_C
IPR027417P-loop_NTPase