mRNA_Ecto-sp13_S_contig1481.3671.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1481.3671.1 vs. uniprot
Match: D8LKT4_ECTSI (DUF202 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKT4_ECTSI) HSP 1 Score: 436 bits (1120), Expect = 1.540e-152 Identity = 245/278 (88.13%), Postives = 246/278 (88.49%), Query Frame = 1
Query: 1 MSSLRHRTGGTLDVGSKKTITVRYEGREHAVSWFVGASDEAITRTIEIALGLPRGTPAVVRDPEDGSALAVSDSLPDGLTVDATAVXXXXXXXXXXXXXXXXXXXXXXXXXXXNNNNSDAKPAHDSAGGIGGXXXXXXXXXXXXXAAHEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSATMDSTAMALGVAFVACTLFTYMTGWLRYTRVKEVLTWTGSQVKGRFGRFGLKYFTWFLGASLVLTVPVYFIAGVNVVEDAR 834
MSSLRHRTGGTLDVGSKK ITVRYEGREHAVSWF GASDEAITRTIE+AL LPRGTPAVVRDPEDGSALAVSDSLPDGLTVDATAV NN NSDAKPAHDSAGGIG XXXXXXXXXXXXXAAHEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSATMDSTAMALGVAFVACTLFTYMTGWLRYTRVKEVLTWTGSQVKGRFGRFGLKYFTWFLGASLVLTVPVYFIAGVNVVEDAR
Sbjct: 1 MSSLRHRTGGTLDVGSKKAITVRYEGREHAVSWFAGASDEAITRTIELALRLPRGTPAVVRDPEDGSALAVSDSLPDGLTVDATAVPACSGGDNDRRRAESSGNGFYGRGESGNNKNSDAKPAHDSAGGIG-XXXXXXXXXXXXXAAHEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSATMDSTAMALGVAFVACTLFTYMTGWLRYTRVKEVLTWTGSQVKGRFGRFGLKYFTWFLGASLVLTVPVYFIAGVNVVEDAR 277
BLAST of mRNA_Ecto-sp13_S_contig1481.3671.1 vs. uniprot
Match: A0A7S3YD22_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YD22_HETAK) HSP 1 Score: 144 bits (363), Expect = 2.140e-38 Identity = 93/256 (36.33%), Postives = 128/256 (50.00%), Query Frame = 1
Query: 46 SKKTITVRYEGREHAVSWFVGASDEAITRTIEIALGLPRGTPAVVRDPEDGSALAVSDSLPDGLTVDATAVXXXXXXXXXXXXXXXXXXXXXXXXXXXNNNNSDAKPAHDSAGGIGGXXXXXXXXXXXXXAAHEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSATMDSTAMALGVAFVACTLFTYMTGWLRYTRVKEVLTWTGSQVKGRFGRFGLKYFTWFLGASLVLT-VPVYFIAG 810
+K+TI+VR + +SW+ G +DE + + I + LP T ++ D D + +A+S SLP G+ + + N A P D A G EF+GELLKFERVNAHLANERTWLAWVRTAL+VL A + + LT+D S T LG ++ L TY TGWLRY +V+E+L GS +K +F RFGL + +L L++T V +F G
Sbjct: 12 AKRTISVRSGRKTERISWYDGTTDEGLEKLIADSFSLPSKTRFILIDSADNTTIALSSSLPSGIELQIQPLEGDPSFDEQRRGVL----------------NKKASPDPDEAADGDGSGLQ----------GQEFQGELLKFERVNAHLANERTWLAWVRTALAVLSSAFTFLGLTEDFASGT-QIFVFVLGGFYIGNVLLTYGTGWLRYAQVREILGLPGSMIKPKFNRFGLSHQARYLAVLLLVTGVSYWFCLG 240
BLAST of mRNA_Ecto-sp13_S_contig1481.3671.1 vs. uniprot
Match: A0A7S2Y0E1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0E1_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.710e-37 Identity = 90/252 (35.71%), Postives = 129/252 (51.19%), Query Frame = 1
Query: 49 KKTITVRYEGREHAVSWFVGASDEAITRTIEIALGLPRGTPAVVRDPEDGSALAVSDSLPDGLTVDATAVXXXXXXXXXXXXXXXXXXXXXXXXXXXNNNNSDAKPAHDS--AGGIGGXXXXXXXXXXXXXAAHEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSATMDSTAMALGVAFVACTLFTYMTGWLRYTRVKEVLTWTGSQVKGRFGRFGLKYFTWFLGASLVLTVPVY 798
KK+ + + ++ +++WF GA+D ++ R + A LP + ++ DP DG +A+S++LP GL ++ V + A+ DS +GG+ +FRGELLKFERVNAHLANERT+LAWVRTALSVL A S+ SLT+D G +V LFTY TGW+RY++V+ +L S+VK +FGRFGL + FL + T Y
Sbjct: 10 KKSAVLAFGQKKESITWFPGATDASLHRLVLDAFSLPLHSRFLLVDPADGCIVALSENLPSGLVLNVQHVQTQGRDTPAKEGQAY----------------TSAREDRDSEKSGGL-------ESGDDESSTGKKFRGELLKFERVNAHLANERTFLAWVRTALSVLSSAFSIDSLTEDFSDGAFKVMVFIFGCLYVVGVLFTYTTGWVRYSQVRAILGLPASKVKAQFGRFGLSHVAKFLAFLFLFTAIGY 238
BLAST of mRNA_Ecto-sp13_S_contig1481.3671.1 vs. uniprot
Match: A0A7S2WVC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVC3_9STRA) HSP 1 Score: 130 bits (327), Expect = 4.300e-33 Identity = 91/264 (34.47%), Postives = 131/264 (49.62%), Query Frame = 1
Query: 28 GTLDVGSKKTITVRYEGREHAVSWFVGASDEAITRTIEIALGLPRGTPAVVRDPEDGSALAVSDSLPDGLTVDATAVXXXXXXXXXXXXXXXXXXXXXXXXXXXNNNNSDAKPAHDSAGGIGGXXXXXXXXXXXXXAAHEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSATMDSTAMAL---GVAFVACTLFTYMTGWLRYTRVKEVLTWTGSQVKGRFGRFGLKYFTWFLGASLVLTVPVYFIAG 810
G + V + + R GR V+W+ G+S ++ +++ ALG+ P RD E G +A+SD+LPD + V +S A+P + + FRG++LKFERV AHLANERTWLAWVRTAL+ L ++ +L++L+DD AT D A+ L G V LFT++TGWLRY RVK+VL ++ FGRFGL + FL A LV + + ++ G
Sbjct: 15 GRMAVRRQVEVVDRSSGRRAVVAWYPGSSTASLLQSMVSALGIADDRPRCPRD-ESGRVVALSDTLPDATVLYMDLVSETPTP------------------------SSPAEPTGPAKPNL---------------RLSAFRGQVLKFERVQAHLANERTWLAWVRTALAALSISFTLLTLSDD---ATKDWLALFLFVVGCLMVVNVLFTFITGWLRYVRVKDVLMLRKQEMSDEFGRFGLSHHARFLSALLV-AISIAYLGG 234
BLAST of mRNA_Ecto-sp13_S_contig1481.3671.1 vs. uniprot
Match: A0A7S2FKJ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKJ2_9STRA) HSP 1 Score: 120 bits (301), Expect = 9.030e-30 Identity = 61/101 (60.40%), Postives = 75/101 (74.26%), Query Frame = 1
Query: 448 FRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSATMDSTAMALGVAFVACTLFTYMTGWLRYTRVKEVLTWTGSQVKGRFGRFGLKY 750
FRG++LKFERV AHLANERTWLAWVRTALS L +A SL++L+DD SA+ +G VA LFT++TGWLRY RVK+VL T S++ FGRFGL +
Sbjct: 91 FRGQVLKFERVQAHLANERTWLAWVRTALSALTIAFSLLTLSDDASSAS-QLALFVMGSCMVANVLFTFVTGWLRYVRVKDVLMLTRSEMSENFGRFGLSH 190
BLAST of mRNA_Ecto-sp13_S_contig1481.3671.1 vs. uniprot
Match: A0A7S2GM95_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GM95_9STRA) HSP 1 Score: 116 bits (290), Expect = 3.420e-28 Identity = 61/125 (48.80%), Postives = 77/125 (61.60%), Query Frame = 1
Query: 436 AAHEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSATMDSTAMALGVAFVACTLFTYMTGWLRYTRVKEVLTWTGSQVKGRFGRFGLKYFTWFLGASLVLTVPVYFIAG 810
A+ FRG++LKFERV AHLANERTWLAWVRTALS L +A SL++L+D+ + T +G VA L T++TGWLRY RVK+VL + FGR GL + FL L + Y G
Sbjct: 63 ASMAFRGQVLKFERVQAHLANERTWLAWVRTALSALSIAFSLLTLSDESTKQWLKVTLFVVGSLMVANVLMTFVTGWLRYVRVKDVLMLDKQDMSANFGRLGLSHQARFLSLLLFVISFAYITGG 187
BLAST of mRNA_Ecto-sp13_S_contig1481.3671.1 vs. uniprot
Match: A0A7S2G4H1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G4H1_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.920e-24 Identity = 53/121 (43.80%), Postives = 75/121 (61.98%), Query Frame = 1
Query: 448 FRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSATMDSTAMALGVAFVACTLFTYMTGWLRYTRVKEVLTWTGSQVKGRFGRFGLKYFTWFLGASLVLTVPVYFIAG 810
F+ ++LKF+R+NAHLANERTWLAW+RT S+L L+L + +D S T A+G A + FTYMTGW+RY +VKE+L + + GR LKY T+ + +L VY++ G
Sbjct: 58 FQKQMLKFDRINAHLANERTWLAWIRTTFSLLSCGLTLQTYANDSSSGTWHWWLFAVGCATIVSMDFTYMTGWIRYGKVKEILQQNKEVLGPKMGRLKLKYQTFLVFGTLCTVAVVYWMGG 178
BLAST of mRNA_Ecto-sp13_S_contig1481.3671.1 vs. uniprot
Match: F0YI70_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI70_AURAN) HSP 1 Score: 103 bits (256), Expect = 5.520e-23 Identity = 50/120 (41.67%), Postives = 70/120 (58.33%), Query Frame = 1
Query: 448 FRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSATMDSTAMALGVAFVACTLFTYMTGWLRYTRVKEVLTWTGSQVKGRFGRFGLKYFTWFLGASLVLTVPVYFIA 807
FR +L+KFE + AHLANERTWLAWVRT+LS L VA SL++L D + + LG F+ ++TGWLRY R+++VL T +V F R G+++ +G + Y A
Sbjct: 88 FRKQLIKFENIQAHLANERTWLAWVRTSLSALSVAFSLLTLVGDSRESWLAVVLFLLGSGFIVSVFTAFLTGWLRYARIRDVLMLTKREVPAHFHRIGVRHQARLMGLLFIFLTATYLCA 207
BLAST of mRNA_Ecto-sp13_S_contig1481.3671.1 vs. uniprot
Match: A0A7S3K4A5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4A5_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.920e-22 Identity = 50/121 (41.32%), Postives = 75/121 (61.98%), Query Frame = 1
Query: 448 FRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSATMDSTAMALGVAFVACTLFTYMTGWLRYTRVKEVLTWTGSQVKGRFGRFGLKYFTWFLGASLVLTVPVYFIAG 810
FR +L+KFE + AHLANERT+LAW+RTAL+ L ++ SL++L D + + ALG AFV T++TGWLR+ R++++L +QV F R GL + +F+ L +Y + G
Sbjct: 82 FRRQLIKFENIQAHLANERTFLAWIRTALASLSISFSLLALVADASKNWLAACLYALGAAFVFSVFTTFLTGWLRFARIRDILMLAQNQVPTDFHRIGLSHQAYFIAILCGLLTFLYLVGG 202
BLAST of mRNA_Ecto-sp13_S_contig1481.3671.1 vs. uniprot
Match: A0A7S2DFA2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFA2_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 8.870e-17 Identity = 48/125 (38.40%), Postives = 71/125 (56.80%), Query Frame = 1
Query: 445 EFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSATMDSTAMAL---GVAFVACTLFTYMTGWLRYTRVKEVLTWTGSQVKGRFGRFGLKYFTWFLGASLVLTVPVYFIAG 810
+F+ + +KFERV +HLANERTWLAW+R AL++L A ++ L D + + ++AL G+ +V T + GWLRY R K +L + + FG G+ LG+ LV TV Y+ G
Sbjct: 98 QFQDQYVKFERVLSHLANERTWLAWIRAALTMLSSAFTIWKLYDSVNDKIHPTISLALYSLGLCYVLVVPLTVVVGWLRYERTKHILGLSKVDIHEYFGSLGVVIQAALLGSVLVFTVGCYWSLG 222 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1481.3671.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1481.3671.1 >prot_Ecto-sp13_S_contig1481.3671.1 ID=prot_Ecto-sp13_S_contig1481.3671.1|Name=mRNA_Ecto-sp13_S_contig1481.3671.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=279bp MSSLRHRTGGTLDVGSKKTITVRYEGREHAVSWFVGASDEAITRTIEIALback to top mRNA from alignment at Ecto-sp13_S_contig1481:11974..14261- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1481.3671.1 ID=mRNA_Ecto-sp13_S_contig1481.3671.1|Name=mRNA_Ecto-sp13_S_contig1481.3671.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2288bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1481:11974..14261- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1481:11974..14261- >mRNA_Ecto-sp13_S_contig1481.3671.1 ID=mRNA_Ecto-sp13_S_contig1481.3671.1|Name=mRNA_Ecto-sp13_S_contig1481.3671.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=837bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1481:11974..14261- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |