prot_Ecto-sp13_S_contig14799.3656.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14799.3656.1
Unique Nameprot_Ecto-sp13_S_contig14799.3656.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length537
Homology
BLAST of mRNA_Ecto-sp13_S_contig14799.3656.1 vs. uniprot
Match: A0A6H5KY73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY73_9PHAE)

HSP 1 Score: 813 bits (2101), Expect = 7.070e-291
Identity = 476/537 (88.64%), Postives = 491/537 (91.43%), Query Frame = 0
Query:    1 MRAPTAAATPLVVLPLIMLPMTHGAALSRMFATRQASLDQNGPARMIRGVPSAAGLEAGKREGGKISRRNTESFGPLALLDVCYMEDDCTPGLYVEAGFRTQCEKTPFSGGDTVCCKPFATPCDSDKACCSGNCDVTHTRCDDAIVPAHPTDEEHSHEDXXXXXXXXXXXXXXXXXXXXXXXXTSRDNSGDIMADQQDAEGGQLYDDGKFSHGEYXXXXXXXXXXDDRTAGSGLDRYWDGYSGRYSIGQDDYTTSSEATPRAQDNPLAEDSGTRPSENPAGSPENNQNDEKGTEFPPQHDETSGVSPKDDGVHEGGEGEEPTAGPLSTSSTEESSTTICQPDYASGTIETMASSEARVEAVAMDSQGNVFYSVSKGQGAGDAFILWAASSSPSSXXXXXXXXXXXXXXTVVYVGTGIILAMAIDADDNLIFTMEDAPAVSGGVFLLSWRQINPGGGVGTEDSSGTGVSRYDSYFGMPSEKAETAETSAVSLAAGLGPFLPGVAVCPVTGDVYVTRGHTGIARLVKGTDGSFSQKVRF 537
            MRA TAAATPLVVLPL MLPMTHG ALSRMFATRQASLDQ+GPARMIRGVPSAAGLEAGKR+G KISRRNTESFGPLALLDVCYM DDCTPGLYVEAGFRTQCEKTPFSGGDTVCCKPFATPCDSDKACCSGNCDV+HTRCDDAIVPAHPTDEEHSHEDXXXXXXXXXXXXXX          T RD+SGDI+ DQ+DAEGGQLYDDG+ S+GE XXXXXXXXXX     G GLDRYW GY GRYS GQ DYTTSSEATPR QDNP AEDSGTRPSE+PAGSP++NQ+DEKGTEFPP+HDETSG SPKDDGVHEGGEGEE TA PLSTSSTEESSTTICQPDYASGTIETMASSE RVEAVAMDSQGNVFYSVSKGQG GDA ILWAASSSP  XXXXXXXXXXXXXXTVVYVGTGIILAMAIDADDNLIFTMEDAPAVSGGVFLLSWRQINPGGGVG EDSS TGVSRYDSYF MPSE   TAETSAVSLAAGLGPFLPGVAVCPVTGDVYVTRGHTGIARLVKGTDGSFSQK+ +
Sbjct:    1 MRALTAAATPLVVLPL-MLPMTHGVALSRMFATRQASLDQSGPARMIRGVPSAAGLEAGKRDGRKISRRNTESFGPLALLDVCYMTDDCTPGLYVEAGFRTQCEKTPFSGGDTVCCKPFATPCDSDKACCSGNCDVSHTRCDDAIVPAHPTDEEHSHEDXXXXXXXXXXXXXXSSD-------TPRDSSGDILTDQRDAEGGQLYDDGESSYGEXXXXXXXXXXXXXSITGPGLDRYWGGYFGRYSFGQYDYTTSSEATPRTQDNPSAEDSGTRPSEDPAGSPDSNQDDEKGTEFPPRHDETSGASPKDDGVHEGGEGEESTAAPLSTSSTEESSTTICQPDYASGTIETMASSETRVEAVAMDSQGNVFYSVSKGQGPGDA-ILWAASSSPXXXXXXXXXXXXXXXXTVVYVGTGIILAMAIDADDNLIFTMEDAPAVSGGVFLLSWRQINPGGGVGAEDSSDTGVSRYDSYFEMPSETG-TAETSAVSLAAGLGPFLPGVAVCPVTGDVYVTRGHTGIARLVKGTDGSFSQKMEW 527          
BLAST of mRNA_Ecto-sp13_S_contig14799.3656.1 vs. uniprot
Match: D7FIV4_ECTSI (NHL repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV4_ECTSI)

HSP 1 Score: 654 bits (1686), Expect = 8.390e-229
Identity = 391/544 (71.88%), Postives = 405/544 (74.45%), Query Frame = 0
Query:    1 MRAPTAAATPLVVLPLIMLPMTHGAALSRMFATRQASLDQNGPARMIRGVPSAAGLEAGKREGGKISRRNTESFGPLALLDVCYMEDDCTPGLYVEAGFRTQCEKTPFSGGDTVCCKPFATPCDSDKACCSGNCDVTHTRCDDAIVPAHPTDEEHSHEDXXXXXXXXXXXXXXXXXXXXXXXX-------TSRDNSGDIMADQQDAEGGQLYDDGKFSHGEYXXXXXXXXXXDDRTAGSGLDRYWDGYSGRYSIGQDDYTTSSEATPRAQDNPLAEDSGTRPSENPAGSPENNQNDEKGTEFPPQHDETSGVSPKDDGVHEGGEGEEPTAGPLSTSSTEESSTTICQPDYASGTIETMASSEARVEAVAMDSQGNVFYSVSKGQGAGDAFILWAASSSPSSXXXXXXXXXXXXXXTVVYVGTGIILAMAIDADDNLIFTMEDAPAVSGGVFLLSWRQINPGGGVGTEDSSGTGVSRYDSYFGMPSEKAETAETSAVSLAAGLGPFLPGVAVCPVTGDVYVTRGHTGIARLVKGTDGSFSQKVRF 537
            MRAPTAAATPLVVLPL MLPMTHG ALSRMFATRQASLDQ+GPA MIRGVP AA LEAGKREGGKISRRNTESFGPLALLDVCYM DDCTPGLYVEAGFRTQCEKTPFSGGDTVCCKPFATPCDSDKACCSGNCD +H RCDDA+VPAHPTDEEHSHED  XXXXXXXXXXXXXXXXXXXXXX       T +D+SGDIMADQQD EGGQLYDDG+ S+GEY          DDR  GSGLDRYWDGYSGRYS GQ DYTTSSE TPRAQDNPLAEDSGTR  E+  GSP+NN +DEKGTEFPP HDETSG SPK DG HEGGEGEE T GPLSTSSTEESSTTICQPDYA+GTIETMASSE RVEAVAMDSQ                                                                                    INPGGGVG EDSSGTGVS YDS+F M SE  ETAETSAVSLAAGLGPFLPGVAVCPVTGDVYVTRGHTGIARLVKGTDGSF QK+ +
Sbjct:    1 MRAPTAAATPLVVLPL-MLPMTHGVALSRMFATRQASLDQSGPAGMIRGVPRAARLEAGKREGGKISRRNTESFGPLALLDVCYMTDDCTPGLYVEAGFRTQCEKTPFSGGDTVCCKPFATPCDSDKACCSGNCDASHARCDDAVVPAHPTDEEHSHEDDFXXXXXXXXXXXXXXXXXXXXXXXXXXTSDTPKDSSGDIMADQQDGEGGQLYDDGETSYGEYDDVQYRHDKYDDRITGSGLDRYWDGYSGRYSFGQYDYTTSSEDTPRAQDNPLAEDSGTRLYEDRVGSPDNNHDDEKGTEFPPPHDETSGASPKADGAHEGGEGEESTTGPLSTSSTEESSTTICQPDYAAGTIETMASSETRVEAVAMDSQ------------------------------------------------------------------------------------INPGGGVGAEDSSGTGVSMYDSFFEMTSE-TETAETSAVSLAAGLGPFLPGVAVCPVTGDVYVTRGHTGIARLVKGTDGSFGQKMEW 458          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14799.3656.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KY73_9PHAE7.070e-29188.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIV4_ECTSI8.390e-22971.88NHL repeat-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..537
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.681
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14799contigEcto-sp13_S_contig14799:395..3096 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14799.3656.1mRNA_Ecto-sp13_S_contig14799.3656.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14799 395..3096 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14799.3656.1 ID=prot_Ecto-sp13_S_contig14799.3656.1|Name=mRNA_Ecto-sp13_S_contig14799.3656.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=537bp
MRAPTAAATPLVVLPLIMLPMTHGAALSRMFATRQASLDQNGPARMIRGV
PSAAGLEAGKREGGKISRRNTESFGPLALLDVCYMEDDCTPGLYVEAGFR
TQCEKTPFSGGDTVCCKPFATPCDSDKACCSGNCDVTHTRCDDAIVPAHP
TDEEHSHEDEFYSDEIAYYSDEIAYYSDEISSYTSRDNSGDIMADQQDAE
GGQLYDDGKFSHGEYGDGQYRHGKYDDRTAGSGLDRYWDGYSGRYSIGQD
DYTTSSEATPRAQDNPLAEDSGTRPSENPAGSPENNQNDEKGTEFPPQHD
ETSGVSPKDDGVHEGGEGEEPTAGPLSTSSTEESSTTICQPDYASGTIET
MASSEARVEAVAMDSQGNVFYSVSKGQGAGDAFILWAASSSPSSANNNVD
TDNSNDGDTVVYVGTGIILAMAIDADDNLIFTMEDAPAVSGGVFLLSWRQ
INPGGGVGTEDSSGTGVSRYDSYFGMPSEKAETAETSAVSLAAGLGPFLP
GVAVCPVTGDVYVTRGHTGIARLVKGTDGSFSQKVRF
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