prot_Ecto-sp13_S_contig14776.3645.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig14776.3645.1
Unique Name	prot_Ecto-sp13_S_contig14776.3645.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	113

Homology

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BLAST of mRNA_Ecto-sp13_S_contig14776.3645.1 vs. uniprot
Match: A0A6H5LRL5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LRL5_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 6.290e-39
Identity = 66/85 (77.65%), Postives = 73/85 (85.88%), Query Frame = 0

Query:    1 MFEAWDSQEKALAILGHRKWVEKAGSEIGRIDGLGKTLFSHLWQDRKERLAIGDRSCYNNAPSYRGRVVNGLTAKACKTSRVTPP 85
            MFEAW+ +E+ +A+LGHR+WVEKAG +I RID LGKT  SHLWQ RKERLAIGDRSC NNAPS RGRVVNGLTAKACKT RV PP
Sbjct:  369 MFEAWNREERTVAVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKTQRVRPP 453

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BLAST of mRNA_Ecto-sp13_S_contig14776.3645.1 vs. uniprot
Match: A0A6H5JKC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKC1_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 5.060e-38
Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 0

Query:    1 MFEAWDSQEKALAILGHRKWVEKAGSEIGRIDGLGKTLFSHLWQDRKERLAIGDRSCYNNAPSYRGRVVNGLTAKACKT 79
            MFEAWD++E  +A+LGHR+WVEKAG +I RID LGKT  SHLWQ RKERLAIGDRSC NNAPSYRGR VNGLTAKAC+T
Sbjct:  235 MFEAWDTKESTVAVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSYRGRAVNGLTAKACRT 313

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BLAST of mRNA_Ecto-sp13_S_contig14776.3645.1 vs. uniprot
Match: A0A6H5KJX4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJX4_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 1.560e-37
Identity = 61/79 (77.22%), Postives = 67/79 (84.81%), Query Frame = 0

Query:    1 MFEAWDSQEKALAILGHRKWVEKAGSEIGRIDGLGKTLFSHLWQDRKERLAIGDRSCYNNAPSYRGRVVNGLTAKACKT 79
            MFEAW+ +E+ +A+LGHR+WVEKAG  I RID LGKT  SHLWQ RKERLA GDRSC NNAPS RGRVVNGLTAKACKT
Sbjct:   92 MFEAWNREERTVAVLGHRRWVEKAGRGIVRIDRLGKTFLSHLWQSRKERLAFGDRSCGNNAPSSRGRVVNGLTAKACKT 170

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BLAST of mRNA_Ecto-sp13_S_contig14776.3645.1 vs. uniprot
Match: A0A6H5JCQ0_9PHAE (Uncharacterized protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCQ0_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 4.840e-37
Identity = 61/79 (77.22%), Postives = 68/79 (86.08%), Query Frame = 0

Query:    1 MFEAWDSQEKALAILGHRKWVEKAGSEIGRIDGLGKTLFSHLWQDRKERLAIGDRSCYNNAPSYRGRVVNGLTAKACKT 79
            MFEAW+ +E+ +A+LGHR+WVEKAG +I RID LGKT  SHLWQ RKERLAIGDRSC NNAPS RGRVVNGLTAK CKT
Sbjct:  185 MFEAWNREERTVAVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKTCKT 263

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BLAST of mRNA_Ecto-sp13_S_contig14776.3645.1 vs. uniprot
Match: A0A6H5KVX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVX2_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 9.370e-36
Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 0

Query:    1 MFEAWDSQEKALAILGHRKWVEKAGSEIGRIDGLGKTLFSHLWQDRKERLAIGDRSCYNNAPSYRGRVVNGLTAKACKT 79
            MFEAW+ +E+ +A+LGHR+WVEKAG +I RID LGKT  SHLWQ RKERLAIGDRSC NNAPS RGRVVNGLTAKACKT
Sbjct:  420 MFEAWNREERTVAVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKT 498

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BLAST of mRNA_Ecto-sp13_S_contig14776.3645.1 vs. uniprot
Match: A0A6H5JD24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD24_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 4.030e-35
Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 0

Query:    1 MFEAWDSQEKALAILGHRKWVEKAGSEIGRIDGLGKTLFSHLWQDRKERLAIGDRSCYNNAPSYRGRVVNGLTAKACKT 79
            MFEAW+ +E+ +A+LGHR+WVEKAG +I RID LGKT  SHLWQ RKERLAIGDRSC NNAPS RGRVVNGLTAKACKT
Sbjct:  442 MFEAWNREERTVAVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKT 520

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BLAST of mRNA_Ecto-sp13_S_contig14776.3645.1 vs. uniprot
Match: A0A6H5JE77_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE77_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 4.060e-35
Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 0

Query:    1 MFEAWDSQEKALAILGHRKWVEKAGSEIGRIDGLGKTLFSHLWQDRKERLAIGDRSCYNNAPSYRGRVVNGLTAKACKT 79
            MFEAW+ +E+ +A+LGHR+WVEKAG +I RID LGKT  SHLWQ RKERLAIGDRSC NNAPS RGRVVNGLTAKACKT
Sbjct:  619 MFEAWNREERTVAVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKT 697

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BLAST of mRNA_Ecto-sp13_S_contig14776.3645.1 vs. uniprot
Match: A0A6H5KRD0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRD0_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 4.250e-35
Identity = 60/79 (75.95%), Postives = 68/79 (86.08%), Query Frame = 0

Query:    1 MFEAWDSQEKALAILGHRKWVEKAGSEIGRIDGLGKTLFSHLWQDRKERLAIGDRSCYNNAPSYRGRVVNGLTAKACKT 79
            MFEAW+ +E+ +A++GHR+WVEKAG +I RID LGKT  SHLWQ RKERLAIGDRSC NNAPS RGRVVNGLTAK CKT
Sbjct:  437 MFEAWNREERTVAVVGHRRWVEKAGRDIARIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKTCKT 515

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BLAST of mRNA_Ecto-sp13_S_contig14776.3645.1 vs. uniprot
Match: A0A6H5L4L1_9PHAE (Reverse transcriptase domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4L1_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 4.650e-35
Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 0

Query:    1 MFEAWDSQEKALAILGHRKWVEKAGSEIGRIDGLGKTLFSHLWQDRKERLAIGDRSCYNNAPSYRGRVVNGLTAKACKT 79
            MFEAW+ +E+ +A+LGHR+WVEKAG +I RID LGKT  SHLWQ RKERLAIGDRSC NNAPS RGRVVNGLTAKACKT
Sbjct:  705 MFEAWNREERTVAVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKT 783

[Close]

BLAST of mRNA_Ecto-sp13_S_contig14776.3645.1 vs. uniprot
Match: A0A6H5K4W7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4W7_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 5.030e-35
Identity = 63/87 (72.41%), Postives = 72/87 (82.76%), Query Frame = 0

Query:    1 MFEAWDSQEKALAILGHRKWVEKAGSEIGRIDGLGKTLFSHLWQDRKERLAIGDRSCYNNAPSYRGRVVNGLTAKACKTSRV-TPPP 86
            MFEAW+ +E+ +A+LGHR+WVEKAG +I RID LGKT  SHLWQ  KERLAIGDRSC NNAPS RGRVV+GLTAKACK   + TPPP
Sbjct:  887 MFEAWNREERTVAVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSSKERLAIGDRSCGNNAPSSRGRVVDGLTAKACKRKNIRTPPP 973

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig14776.3645.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig14776.3645.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5LRL5_9PHAE	6.290e-39	77.65	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JKC1_9PHAE	5.060e-38	78.48	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KJX4_9PHAE	1.560e-37	77.22	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JCQ0_9PHAE	4.840e-37	77.22	Uncharacterized protein n=7 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KVX2_9PHAE	9.370e-36	78.48	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JD24_9PHAE	4.030e-35	78.48	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JE77_9PHAE	4.060e-35	78.48	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KRD0_9PHAE	4.250e-35	75.95	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5L4L1_9PHAE	4.650e-35	78.48	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K4W7_9PHAE	5.030e-35	72.41	Reverse transcriptase domain-containing protein n=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 112..112
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 88..111
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..87

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig14776	contig	Ecto-sp13_S_contig14776:826..1164 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig14776.3645.1	mRNA_Ecto-sp13_S_contig14776.3645.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig14776 252..1177 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig14776.3645.1 ID=prot_Ecto-sp13_S_contig14776.3645.1|Name=mRNA_Ecto-sp13_S_contig14776.3645.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=113bp
MFEAWDSQEKALAILGHRKWVEKAGSEIGRIDGLGKTLFSHLWQDRKERL
AIGDRSCYNNAPSYRGRVVNGLTAKACKTSRVTPPPRLSCILLCWLSRHG
WLFSLLLPYFFS*