mRNA_Ecto-sp13_S_contig1477.3641.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1477.3641.1
Unique NamemRNA_Ecto-sp13_S_contig1477.3641.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1477.3641.1 vs. uniprot
Match: D8LM79_ECTSI (Putative BAX inhibitor n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM79_ECTSI)

HSP 1 Score: 452 bits (1164), Expect = 2.150e-154
Identity = 243/263 (92.40%), Postives = 247/263 (93.92%), Query Frame = 2 
Query:    2 ASSPLGNMFSREINVSALLKANDITLDVQRHLANVYAALAATVLACAFGAAADLWLHVGGLLTMVAGLGAMVWLAADQDKNNYPKRVGILLLFGLLKGFSLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGAALFSKRRSYLYLGGLLSSVLSVLMVASLLNHFMRLEFLMSVQLYGGLAVFCGYVIFDTQLVVEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRNKDKEGDRRSSRRSSSG-SGYYSSGSRTGRTARR 787
            ASSPLGNMF REINVSALLKANDITLDVQRHLANVYAALAATVLACAFGAAADLWLHVGGLLT+VAGLGAM+WLAADQDKNNYPKRVGILLLFGLLKG SLGPLIDMVLHVDPSILVTSLLATTTVFVCFAG ALF+KRRSYLYLGGLLSSVLSVLMVASLLN FMRLEFLMS+QLYGGLAVFCGYVIFDTQLVVEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRNKDKEGDR S        S YY SGSRTGRT RR
Sbjct:    2 ASSPLGNMFGREINVSALLKANDITLDVQRHLANVYAALAATVLACAFGAAADLWLHVGGLLTVVAGLGAMMWLAADQDKNNYPKRVGILLLFGLLKGLSLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGTALFAKRRSYLYLGGLLSSVLSVLMVASLLNLFMRLEFLMSIQLYGGLAVFCGYVIFDTQLVVEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRNKDKEGDRSSXXXXXXXXSSYYGSGSRTGRTTRR 264
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BLAST of mRNA_Ecto-sp13_S_contig1477.3641.1 vs. uniprot
Match: A0A1V9ZSC7_9STRA (Bax inhibitor-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSC7_9STRA)

HSP 1 Score: 213 bits (541), Expect = 1.910e-61
Identity = 113/229 (49.34%), Postives = 157/229 (68.56%), Query Frame = 2 
Query:   41 NVSALLKANDITLDVQRHLANVYAALAATVLACAFGAAADLWLHVGGLLTMVAGLGAMVWLAADQDKNNYPKRVGILLLFGLLKGFSLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGAALFSKRRSYLYLGGLLSSVLSVLMVASLLNHFMRLEFLMSVQLYGGLAVFCGYVIFDTQLVVEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRNKDKEGDRRSSRR 727
            ++ ALLKANDI++ VQ+HL  VYAALAAT+L    G A D  L + GL +    LG +++L    DK    KR+G+LL      G ++GPL+ + L VD SI++T+ LAT  +F+CF G+AL  KRR+Y+YL  ++SS   V+ + SL+N F R   L +  LY GL VFCGYV+FDTQ+++EKA+LGD DF  HA ELF+DF+ IFVR+ +IL+RN +K+  +R SRR
Sbjct:   11 DLGALLKANDISIPVQQHLVRVYAALAATILVAGVGVALDAMLDLAGLTSTFGSLGLIIYLFF-VDKQLVAKRMGVLLTIAACMGINIGPLVSVALDVDASIVITAFLATAVIFLCFTGSALIEKRRTYMYLISVISSATLVMSMISLVNLFTRSIALYNAHLYMGLLVFCGYVLFDTQMIIEKASLGDLDFIGHALELFLDFINIFVRLLVILLRNAEKKEKKRESRR 238
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BLAST of mRNA_Ecto-sp13_S_contig1477.3641.1 vs. uniprot
Match: A0A8K1C2C6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2C6_PYTOL)

HSP 1 Score: 210 bits (534), Expect = 3.670e-60
Identity = 119/244 (48.77%), Postives = 167/244 (68.44%), Query Frame = 2 
Query:   41 NVSALLKANDITLDVQRHLANVYAALAATVLACAFGAAADLWL---------HVGGL-----LTMVAGLGAMVWLAADQDKNNYPKRVGILLLFGLLKGFSLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGAALFSKRRSYLYLGGLLSSVLSVLMVASLLNHFMRLEFLMSVQLYGGLAVFCGYVIFDTQLVVEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRNKDK--EGDRRSSR 724
            ++ A+LK + I+ DVQ+HL NVYA L+A+V+ CA   A+ +WL         ++G L     L M AG+   VWL  +   N   KR  IL++     G +L  L+ + L +DPSILVT+ L TTTVF+CF+G+A+F+ RRSYLYLGGLLSS LSV+++ +L N+F R   + +  LYGGL VFC YV+FDTQ+++E+A+LGD+D   H+ +LF+DFVGIFVRI +IL++NK K  E D+RS R
Sbjct:   18 DLQAMLKTSGISYDVQQHLVNVYAMLSASVVCCALSCASVIWLSPSPLFVAENIGWLSLLNTLMMTAGI---VWLHMEPVYNK-AKRFMILMMISATMGITLSALVAITLEIDPSILVTAFLITTTVFLCFSGSAMFATRRSYLYLGGLLSSALSVMVLMNLFNYFFRSVMIDNALLYGGLVVFCAYVMFDTQMIIERASLGDKDAIKHSLDLFLDFVGIFVRIVVILLKNKQKKDEEDKRSRR 257
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BLAST of mRNA_Ecto-sp13_S_contig1477.3641.1 vs. uniprot
Match: A0A067CKP9_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067CKP9_SAPPC)

HSP 1 Score: 209 bits (531), Expect = 5.940e-60
Identity = 111/229 (48.47%), Postives = 158/229 (69.00%), Query Frame = 2 
Query:   41 NVSALLKANDITLDVQRHLANVYAALAATVLACAFGAAADLWLHVGGLLTMVAGLGAMVWLAADQDKNNYPKRVGILLLFGLLKGFSLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGAALFSKRRSYLYLGGLLSSVLSVLMVASLLNHFMRLEFLMSVQLYGGLAVFCGYVIFDTQLVVEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRNKDKEGDRRSSRR 727
            N+ AL KANDI++ VQ+HL  VY ALAAT+LA A G   D+   + G+ T+ A +G +  L    +K+   KR+G+L+      G ++GPL+   L+VDP+I+VT+ LATT +F+CF G+AL  KRRSY+Y+   +SS   V+ + SL+N F R   L +  LY GL VFC YV+FDTQ+++EKAT+GD DF  HA +LF+DFV IFVR+ +IL+RNK+++  +R SRR
Sbjct:   13 NMEALFKANDISVPVQQHLVRVYTALAATLLAAAAGVGLDMAYDLAGITTVCASVGFIFGLFF-VEKHLVMKRLGMLMAIATCTGINIGPLVATALNVDPAIVVTACLATTVIFLCFTGSALIEKRRSYMYMMSFISSATMVMSLISLVNIFSRSIALYNAHLYMGLLVFCAYVLFDTQMIIEKATMGDMDFVLHALDLFLDFVNIFVRLVVILLRNKEQKDKKRESRR 240
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BLAST of mRNA_Ecto-sp13_S_contig1477.3641.1 vs. uniprot
Match: A0A6A7GBE8_9CRUS (BAX inhibitor (Fragment) n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GBE8_9CRUS)

HSP 1 Score: 207 bits (526), Expect = 4.110e-59
Identity = 109/230 (47.39%), Postives = 161/230 (70.00%), Query Frame = 2 
Query:   29 SREINVSALLKANDITLDVQRHLANVYAALAATVLACAFGAAADLWLHVGG---LLTMVAGLGAMVWLAADQDKNNYPKRVGILLLFGLLKGFSLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGAALFSK-RRSYLYLGGLLSSVLSVLMVASLLNH-FMRLE-FLMSVQLYGGLAVFCGYVIFDTQLVVEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRNKDK 700
            + +I++  +L+ + ++ +V+ H++ VYA LA+T+L CAFGA A +   +GG    L  +A +G ++WL  + DK NY KR+ ++ LFG  +G ++GPLI + + VD SI+VT+ L T TVF CF+ +AL S  +RSYLYLGG+LSS LSV+++ SLL   F  +   + S+ LYGGL +F GY+++DTQ++V KA  GD DF WH+ ELF+DF+ +FVRI IILMRN  K
Sbjct:   18 NNDISLEKMLRLSHLSDNVRVHISKVYAVLASTLLCCAFGAYAQIVFRIGGQTQFLPFIASIGILLWLGLESDKTNYVKRISLVSLFGFFQGLTIGPLIGLAITVDSSIVVTAALTTATVFTCFSLSALLSSGKRSYLYLGGMLSSGLSVMLLLSLLQFIFPSISGAVFSINLYGGLILFLGYILYDTQVMVIKAEAGDPDFVWHSLELFLDFIAVFVRILIILMRNSKK 247
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BLAST of mRNA_Ecto-sp13_S_contig1477.3641.1 vs. uniprot
Match: K3XBH3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBH3_GLOUD)

HSP 1 Score: 207 bits (526), Expect = 4.510e-59
Identity = 119/240 (49.58%), Postives = 153/240 (63.75%), Query Frame = 2 
Query:   20 NMFSREINVS----ALLKANDITLDVQRHLANVYAALAATVLACAFGAAADLWLHVG--------GLLTMVAGLGAMVWLAADQDKNNYPKRVGILLLFGLLKGFSLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGAALFSKRRSYLYLGGLLSSVLSVLMVASLLNHFMRLEFLMSVQLYGGLAVFCGYVIFDTQLVVEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRNKDKE 703
            NMFS   + S    A+LK + I+ DVQ+HL  VYA L+  VL  A  A A L L           GLL      G  VWL  +   N + KR GILL+     G S+  LI++ L VDPSIL+T+ L TT VF+CF G+AL + RRSYLYLG +LSS LS +++ + LN F R   L S  LYGGL VFCGYV+FDTQ+++EKA++GD+D   HA ELF+DFV IFVRI +IL++N DK+
Sbjct:    2 NMFSTSASPSWDLQAMLKTSGISADVQQHLVRVYATLSTCVLTAALSAGAVLALSSSAVENAQWMGLLAFFGATGGSVWLHLEPTYN-HQKRFGILLMVAASMGVSMSALIEIALEVDPSILITAFLMTTMVFLCFTGSALLATRRSYLYLGAILSSALSTMVLLNFLNIFFRSTMLYSASLYGGLVVFCGYVVFDTQMIIEKASMGDKDSLRHALELFLDFVSIFVRIMVILIQNADKK 240
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BLAST of mRNA_Ecto-sp13_S_contig1477.3641.1 vs. uniprot
Match: A0A835ZGD5_9STRA (Inhibitor of apoptosis-promoting Bax1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGD5_9STRA)

HSP 1 Score: 206 bits (525), Expect = 1.240e-58
Identity = 107/218 (49.08%), Postives = 154/218 (70.64%), Query Frame = 2 
Query:   47 SALLKANDITLDVQRHLANVYAALAATVLACAFGAAADLWLHVGGLLTMVAGLGAMVWLAADQDKNNYPKRVGILLLFGLLKGFSLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGAALFSKRRSYLYLGGLLSSVLSVLMVASLLNHFMRLEFLMSVQLYGGLAVFCGYVIFDTQLVVEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRNKDK 700
            SA  K + +T +V++H+A+VY ALA T++A A G    L  + GGLL+ +   GA++ L++    +N+  R+G+LL  GLL+G ++G L+ + L ++P+I++ +   T  VF CFA AAL +KRR+YLYLGG+L SV S++ + SLLN FMR   L  +QL+GGL  FCG+V+FDTQL++EKA  G RD A HA ELF+DFV IFVRI II++RN +K
Sbjct:   22 SAATKNSPLTEEVRKHVADVYIALACTLIAAAMGVTLHLMTNCGGLLSGLGSFGAVIALSSGAYASNFTARMGLLLGIGLLQGMTIGELVAVALSINPAIVLLAAAGTAVVFACFAAAALVAKRRTYLYLGGVLGSVTSIMCLMSLLNMFMRSPMLYELQLFGGLVAFCGFVVFDTQLMIEKAVGGSRDVALHAMELFVDFVSIFVRILIIMIRNAEK 239
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BLAST of mRNA_Ecto-sp13_S_contig1477.3641.1 vs. uniprot
Match: A0A2D4C4M5_PYTIN (Bax inhibitor-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4M5_PYTIN)

HSP 1 Score: 206 bits (523), Expect = 1.580e-58
Identity = 115/241 (47.72%), Postives = 156/241 (64.73%), Query Frame = 2 
Query:   41 NVSALLKANDITLDVQRHLANVYAALAATVLACAFGAAADLWLHVG-----------GLLTMVAGLGAMVWLAADQDKNNYPKRVGILLLFGLLKGFSLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGAALFSKRRSYLYLGGLLSSVLSVLMVASLLNHFMRLEFLMSVQLYGGLAVFCGYVIFDTQLVVEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRNKDKEGDRRSSRRS 730
            +VSA+LK + I++DVQRHL  VYAAL+A VL  A    A + L              GL++ +   G  VWL  +   +N+ KR  +L++     G SL  L+ + L VDP+IL+T+ L TTTVF+CF G+AL + RRSYLYLGGLLSS +S ++V S+ N F R   +    LY GLA+FC YVIFDTQ+++EKA+LGD+D   HA ELF+DFV IFVRI +IL++N  K+     S+RS
Sbjct:   18 DVSAMLKTSGISVDVQRHLVQVYAALSACVLTAAITCGAVVLLSPTPLYMSKMSGWIGLISFLGATGGAVWLQMEPP-HNFHKRFAVLMMISAAMGLSLSALVALTLEVDPTILITAFLMTTTVFLCFTGSALLATRRSYLYLGGLLSSAMSTMLVMSIFNIFFRSTMVYMAHLYLGLAIFCAYVIFDTQMIIEKASLGDKDSLKHALELFLDFVSIFVRILVILLQNSGKKRSNSESKRS 257
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BLAST of mRNA_Ecto-sp13_S_contig1477.3641.1 vs. uniprot
Match: A0A1V9ZZV9_9STRA (Bax inhibitor 1 isoform X2 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZV9_9STRA)

HSP 1 Score: 204 bits (520), Expect = 3.610e-58
Identity = 106/234 (45.30%), Postives = 158/234 (67.52%), Query Frame = 2 
Query:   26 FSREINVSALLKANDITLDVQRHLANVYAALAATVLACAFGAAADLWLHVGGLLTMVAGLGAMVWLAADQDKNNYPKRVGILLLFGLLKGFSLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGAALFSKRRSYLYLGGLLSSVLSVLMVASLLNHFMRLEFLMSVQLYGGLAVFCGYVIFDTQLVVEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRNKDKEGDRRSSRR 727
            FS+  + +AL KANDI++ VQ+HL  VYA LA TVL+   GA+ D    + G+LT  A +G + WL+   D     KR+ IL+   L  G ++GPL+++ + +DPSI++T+ LATT +F+CF  +AL  KRR+YLY+   +SS   V+   S++ +F R   L +  +Y GL VFC YV+FDTQ+++E+A+LGDRDF  HA  LF+DFV +FVR+  I+MRN+ ++  +R+SRR
Sbjct:   21 FSQNFDFAALFKANDISVPVQQHLVRVYATLAGTVLSAGLGASLDFMFDLAGVLTTCAMVGMIFWLSFI-DTQYVTKRLSILMGVALCSGINIGPLLEVAVDMDPSIVITAFLATTVIFLCFTASALIEKRRTYLYMISFISSATMVMSFISIIYYFSRSSALYNAHMYLGLFVFCAYVLFDTQMIIERASLGDRDFILHALTLFLDFVNLFVRLISIIMRNQQQKDKKRTSRR 253
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BLAST of mRNA_Ecto-sp13_S_contig1477.3641.1 vs. uniprot
Match: A0A4W4FYJ4_ELEEL (Transmembrane BAX inhibitor motif containing 6 n=11 Tax=Clupeocephala TaxID=186625 RepID=A0A4W4FYJ4_ELEEL)

HSP 1 Score: 202 bits (514), Expect = 1.650e-57
Identity = 112/240 (46.67%), Postives = 156/240 (65.00%), Query Frame = 2 
Query:   20 NMFSREINVSALLKANDITLDVQRHLANVYAALAATVLACAFGAAADLWLHV------GGLLTMVAGLGAMVWLA-ADQDKNNYPKRVGILLLFGLLKGFSLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGAALFSKRRSYLYLGGLLSSVLSVLMVASLLNHFMRLEFLMSVQLYGGLAVFCGYVIFDTQLVVEKATLGDRDFAWHAAELFIDFVGIFVRICIIL-MRNKDKEGDRR 715
            N+F R IN  AL K + I+   Q+HL NVYA+LA     C F +AA  ++HV      GGLL+M+  L  M WLA          KR+ IL  F  L G  LGP +D V+ ++PSI++ +LL T+ +F CF  +ALF++RRSYL+LGG L S LS+LM+ SL+N F+    L    +Y GLAV CG+V+FDTQL+VEKA +GD+D+ WH  +LF+DFV IF ++ +IL M  KDK+ +++
Sbjct:    2 NVFDRNINFDALFKFSQISRSTQQHLKNVYASLAV----CMFVSAAGAYVHVVTRLFQGGLLSMLGSLAMMTWLAMTPHSPQTEKKRLAILAGFAFLIGVGLGPAMDYVITINPSIIIMALLGTSVIFTCFTLSALFAQRRSYLFLGGTLMSGLSILMLVSLINMFVGSVMLFKAHVYIGLAVMCGFVLFDTQLIVEKAEMGDKDYIWHCVDLFLDFVTIFRKLMVILAMNEKDKKKEKK 237
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1477.3641.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM79_ECTSI2.150e-15492.40Putative BAX inhibitor n=2 Tax=Ectocarpus TaxID=28... [more]
A0A1V9ZSC7_9STRA1.910e-6149.34Bax inhibitor-like protein n=1 Tax=Achlya hypogyna... [more]
A0A8K1C2C6_PYTOL3.670e-6048.77Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A067CKP9_SAPPC5.940e-6048.47Uncharacterized protein n=3 Tax=Saprolegnia TaxID=... [more]
A0A6A7GBE8_9CRUS4.110e-5947.39BAX inhibitor (Fragment) n=2 Tax=Hirondellea gigas... [more]
K3XBH3_GLOUD4.510e-5949.58Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A835ZGD5_9STRA1.240e-5849.08Inhibitor of apoptosis-promoting Bax1-domain-conta... [more]
A0A2D4C4M5_PYTIN1.580e-5847.72Bax inhibitor-like protein n=1 Tax=Pythium insidio... [more]
A0A1V9ZZV9_9STRA3.610e-5845.30Bax inhibitor 1 isoform X2 n=1 Tax=Thraustotheca c... [more]
A0A4W4FYJ4_ELEEL1.650e-5746.67Transmembrane BAX inhibitor motif containing 6 n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1477contigEcto-sp13_S_contig1477:9883..15531 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Model size1799
Hectar predicted targeting categoryother localisation
Exons6
Cds size900
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1477.3641.1prot_Ecto-sp13_S_contig1477.3641.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1477 10780..15531 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462787.6381035-UTR-Ecto-sp13_S_contig1477:9882..107791681462787.6381035-UTR-Ecto-sp13_S_contig1477:9882..10779Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1477 9883..10779 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462787.6470425-CDS-Ecto-sp13_S_contig1477:10779..111241681462787.6470425-CDS-Ecto-sp13_S_contig1477:10779..11124Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1477 10780..11124 -
1681462787.655478-CDS-Ecto-sp13_S_contig1477:11880..119711681462787.655478-CDS-Ecto-sp13_S_contig1477:11880..11971Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1477 11881..11971 -
1681462787.6637683-CDS-Ecto-sp13_S_contig1477:12696..128681681462787.6637683-CDS-Ecto-sp13_S_contig1477:12696..12868Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1477 12697..12868 -
1681462787.671964-CDS-Ecto-sp13_S_contig1477:13572..136641681462787.671964-CDS-Ecto-sp13_S_contig1477:13572..13664Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1477 13573..13664 -
1681462787.6812553-CDS-Ecto-sp13_S_contig1477:13998..141161681462787.6812553-CDS-Ecto-sp13_S_contig1477:13998..14116Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1477 13999..14116 -
1681462787.6894534-CDS-Ecto-sp13_S_contig1477:15449..155311681462787.6894534-CDS-Ecto-sp13_S_contig1477:15449..15531Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1477 15450..15531 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1477.3641.1

>prot_Ecto-sp13_S_contig1477.3641.1 ID=prot_Ecto-sp13_S_contig1477.3641.1|Name=mRNA_Ecto-sp13_S_contig1477.3641.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=300bp
GFLSTGKHVQQGDQRQRSAQGERHHAGRATASGERLRCPGRDCLGLCFRR
CGRSMAACRRAADHGRRPRRDGVARGRPGQEQLPQEGWHLAPLWPPEGLF
TGATDRHGSARGPVDSGDLSAGHHDRVCVLCGRGPIFQAAELPLPRWLAF
QRPERADGGVSAQPFYAPGVPHERPALRRPRCLLRLCDIRHPAGGGEGYP
RRQGLCVARGRAVHRLRGHFRAYLHHPHAQQGQGRRPTQQQAQQQRQRLL
QQWEPHWAHGPPLIDFTEPPINLSRGFLAAPPRLKTRQLFEYIYPSLRF*
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mRNA from alignment at Ecto-sp13_S_contig1477:9883..15531-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1477.3641.1 ID=mRNA_Ecto-sp13_S_contig1477.3641.1|Name=mRNA_Ecto-sp13_S_contig1477.3641.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5649bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1477:9883..15531- (Ectocarpus species13 EcNAP12_S_4_19m)
GGCTTCCTCTCCACTGGGAAACATGTTCAGCAGGGAGATCAACGTCAGCG
CTCTGCTCAAGGCGAACGACATCACGCTGGACGTGAGTTGAACCGACGGG
TATCATTTTTTGCTGCACAAGAAATCGGTCTGCCGTCCGATCGGCTCATC
ATGTAGGTGGAAGCACCGCGTTGATGCTCCATTGATAGGTATCTGCGTGA
CACCGCGGCGGCGGTGAGGACAGCTCAGTCGTTCTCTTGTGCCTTCGGCA
CCAGGTGCATGGAGTAGGTTGATTGGCCCGTATTCCAGGAGTGACATGAA
CGTGCGAAAACACTGCTGCTGTTCGTTTTTGCTCCTGACAAGCTCCTAAA
TATTCGGTGCGGTTGCGGAGGGATTTTGGTCTTGACGCATGGCGTGGCGG
GTTCCCATCCGTGTGTGCGCACGTGTTGGGGTTGTGGCCCTGCCCTCCAA
CGTTGTCGAGAGCTGGCAGCGACGCCCGTGTTTTGCTTGCCATTGTGGAC
TGCGTTTATCATACTTTCTAGGAGCCCACGTGAGTAATGATTTTATTTTT
TCTAGAAAAAGACCTGTTTCTCCACAGCAGTCAGATGACCCACGAAAACG
ACCGATCCCCACGTGTTTATTGTGTGTTGTAACCGAGTAGACTAGTCCCT
TGCAGCAGTACTCTACACCCGTCGACGTTCAACGTTCAACTACCCTATGA
ACCAGCAGTCTACAGTAGTGCTGTGTAGCACGATGCATGTTTGCGGCGAG
TACCTGCACACACAACAGCGATGTGCACGTTATCGATACTTGTACAACAG
CAGTAACTGCGGCAGATGCTGTGTCGACATAACTAAGCTCGATACTGCTG
TAACACAGTAGTAAATGATGGCAAACACATCGTACGGGGCTTTGTAGCAC
GAAGCTGCACCAAGTGTTGGTTTTACGAAACGCCCCCCTGGGCGACCATA
CTGTACGTATGGCTTATTGTTCCTTGCTATGTGCGACATCGGCCGCCCGC
ACTCTAGTAGAATTGAGTATGAAGGAAGTGCGGAAGGCGCACTGTTCAGA
GTTTCCGGGGGGGGGCTTGAGATATCCTGCATCGTGCGGATCCTAGTGCG
AATCGACTGCACTACACCCCACTTTAGATTCCAACGGCCTAATTATTCCA
ACGCCCGCTTGTTGAGGCAAGGAGGGCGGCGTATCGCCCGAGAGATTGAG
TCTCGAGCATTTTCTCGGCATCCGTTCCATGATACATTGGACCGGGTCCC
CACGACGTTTCCGGCGTTAAAGGTCCCTCTGTCACAAGTTGTTGTGTACA
TTTTGAAGAACTACCAGGGTACATACGAATGCAACAGCTCCCAGCGCTCG
GTTCCCCCTCACGGCGGCCACGTCATTGCCCGCAACCGTCGAATCCTACC
CTCAACACGCAACAGGTGCAACGGCATCTGGCGAACGTCTACGCTGCCCT
GGCCGCGACTGTCTTGGCCTGTGCTTTCGGCGCTGCGGCAGATCTATGGC
TGCATGTCGGAGGGCTGCTGACCATGGTCGCAGGTAAGTGGAGGCCTTTC
TCGCCCCCTCGTAGAATATACTTGTGCACGGGGAGTGAGAGCTCTTTCTA
ACGAGCTCATACTACACGTCGACGTCGCCCGGGCATCAAGTCGTCGTAAA
GCGTGGCTTTGACAGAAGGAGAAGGAATGGCACCCATGGACGTGTGCGTT
CTTCCCGCAGGTCTATCTAGCAAACCTCGAACAGTTCTCCAGGTATCGCC
ATCGTCGAAACGACGAAAGTCTTCGTCCGTTTTTTCACTCTTCACTCGAC
AACATCGCCCCCCACCCCCTCCCGATCCCCGTACACTCCTCCCGCCACTC
TCCCACCGCTTCGAAAGGCCTCGGCGCGATGGTGTGGCTCGCGGCCGACC
AGGACAAGAACAACTACCCCAAGAGGGTTGGCATCTTGCTCCTCTTTGGC
CTCCTGAAGGTGCTGTTATTTTTTCTTCATTTTTTCTCTCTCATTTGGTA
GAGCTTGTGTAAACCTTCGTGTGGTATATTAGCTTGTATAACAGGCGCGT
CGCATTGGTTCGCACCTATGCTTGTGTGTACTTGAAGTCATGGGTTATAA
TGTGAATCGCCTAGACTACCAACGACGATAGTCACAGCTAGAAGTTGTTC
CGAAGGATGTGGTTCAGGACAGCACACGTGTCAAACGGAATATTTTTTTT
GTTGGGTATCACTTGAATGGCCTTTAAAATCACCGCCGAGCCTGGGCGGC
AGCATCGGCAACGGTGGTGTCATCGACGGCGTCAGCGTCATCGTTAGCAC
TAATAGCTCACGCACAAGCACAGGTGCAAGCAAGAAGTGATCAAATTGTG
CGTGTATACTGCTTACCGCTTACGTAGCCTCGATGCTTTCGCGACTTCAC
GTACACAGCCTTGCGAACAAAAAAAGTTAGTTGTATCCCCGGTTGACTTC
GTGCTGTGCAAAACGAGTATCCCGCTTTCGTGCTCACTCAAGAGGCCTGC
CGTAGATTTTCAGCCCCTAGCTTTCGGATGCGCTTCCGTGTGGGTCGGTT
GGTTCTCTCCTCCCCACGCACTCTCCCCTGCGCCGCCGAATGCATCCGCT
CTACTATTCGCCACACCGATGTTATTTTTTTCTGGTTCCTGTTTTATTGT
TATTTGGCTCCAGGGCTTTTCACTGGGGCCACTGATCGACATGGTTCTGC
ACGTGGACCCGTCGATTCTGGTGACCTCTCTGCTGGCCACCACGACCGTG
TTTGTGTGCTTTGCGGGCGCGGCCCTATTTTCCAAGCGGCGGAGCTACCT
CTACCTCGGTGGCTTGCTTTCCAGCGTCCTGAGCGGTTAGTGTGTGTTGT
AGTTGTAGTTGTTGTTGTCGTTTTGCCCTGAACTTCGTTTCTAGTAGTGG
TCCTGCGTTTTGCCTGCATGCCTCGTCCGCTCTCAACTCTTCTCTTGTTG
TTGCTGCTGCTACTGTTACTGCCGCTGCTGTTTGTGTCCTGCACCTCGTT
TGTAGTGGTCCTGTAATTTGCCCGCCGGCCTCGTCGGTTCTCAGCATTTC
TCTTGCTTTTGCCTTTCGTGCCTTTGACTTGTACGTATTGCTTGTCGATG
TTCCCTCTGCTTTGCTTTCCTTTTCTCGCCTCGTAGCGATTGGTTCCGGC
TGCCAATATTTTGGCGCTTTGTTGTCAGCCCGAGTGTGAGATGCAATAGA
CCAACCTCACGCATCGGGTTTGGTCGGGTTTTTATCTCTCGCGTGTAGCC
CGTTTTGTTCGAACAGACAAGACTTGTTGGTAAACGTGAAGAGAGGCTTC
CCTTCAGCGCAAGAAAGCAAAACGATGGGTGTTTTTCGTCGTTTCCCCGC
GGGTGTCTCTCTCACGGTCTTTCGCCCGTCCTCGTCGTACGCCTGACACG
TTCAGTGTTTTTTACGCGTTGCGACTTGTGCGGTTCCTGTTCACACCCCT
TGCCAGCCCGCTGCAGACGGTGTCCCGCCCGCCGCCGACACTCATTCATT
CTTCCCCCGCCGCGCTCTCCCGCGGCTGTCTGTTTCTGTCTGTCCTGTCC
TATTTGTCAGTGCTGATGGTGGCGTCTCTGCTCAACCATTTTATGCGCCT
GGAGTTCCTCATGAGCGTCCAGCTCTACGGCGGCCTCGCTGTCTTCTGCG
GGTGAGCCAGCCCCGCAAAGTATATATATACCTTGCACGGGCCCCCGCCC
GGTTGCAGAGCGGCACGTGCGACAAACGAGCGGCCCGTGGTCTATTGCAG
ATCACGCCTGTTTCACCTGAGCATTATCATCAGATCCCCTCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCT
CTTCTCTCTTACCGCCCCCGCCGTGCGCGAGATGAGCAATGTGTGNNNNN
NNNNNCGGTTGCAGCGCGGCCGGTCCGAAAAACGGGCGGCCCTTTGTTCT
TTGCAGATCACCCCTGTTTCCCCTGAGCATTTTCATCAGATCCCCCCCCC
CCCCCCCCCCCCCCCTCCAGCCGCAACCTGTTGCTGTGAAGCCAGGCCCC
TTTTTGATCGATGCGTTTCCGGCCGAAAGCATCCCTTGCTCCCGGGTCGC
AAGCAAAGCATTTGACAAAGATCTAATTGAGTACCTACCATAGGCGGTTC
TGTATGGAGTGGATGGAATAACCATCTCCACGAGGACCCTCCGCGTCCAA
CTCTCGTCATCATGCGACCTCCCCTCCCCCCCCTTCTTTTCGAGGGTACC
CGATGCCTGGTGCTGAATGTAGCCCTTCTCGCTCTCCGCACTGTTGCAAA
CACTTGGGATTATCGTAACGCCAATTACCCCCTCCTTCTCCCGTGCACCT
GTGTGCGCGGTGCGTATGGTCTTCCCCCCCCCCCCGGCGACCCCCCCCCC
GATAAAGTTATGTGATATTCGACACCCAGCTGGTGGTGGAGAAGGCTACC
CTCGGAGACAGGGACTTTGCGTGGCACGCGGCCGAGCTGTTCATCGACTT
CGTGGGCATTTTCGTGCGTATCTGCATCATCCTCATGCGCAACAAGGACA
AGGAAGGAGACCGACGCAGCAGCAGGCGCAGCAGCAGCGGCAGCGGCTAC
TACAGCAGTGGGAGCCGCACTGGGCGCACGGCCCGCCGTTGATTGATTTC
ACGGAGCCACCAATCAATCTCAGTCGAGGGTTCCTTGCTGCCCCCCCCCG
CTTAAAAACGCGCCAGCTCTTCGAGTATATTTATCCTTCCTTGAGATTTT
AATTTTTTCAGGGTGGCAGGCGTACTCCCGTGGTGACACGTCTGCAGTAT
TGTAGTGTGAGGGGCGGTGGCAGCGAACGGCAAAGCGGTGACGGCCAAGA
TGGGCGTGTTGCCTGCGTGCGTCTCTTTCGTGTCCTGCGGGCTTGGTTGC
CGATCTGACGGCATCCTCGCCAACGCTCGTTGTTTTTTTGACGCTCGCTT
TTCCTTGAACGAACCCCTCCGCCGCGATCGACGTTTGTTTCCATTTCGTT
GTCGCCAATCGTCTTTGCTTTCGAAAGTGAGCGGTGTGTGCTGGTTGGTC
ACTCTGTCCTTGTCGAAGCATGCGCGTCGAACGAGGGGCGTTCAGCTGTT
GCTGTTGCTGCCTAAGCGCATTTGGCCAGAAAAGTCGGGGTTTTGTTGAG
GCCGCCCGCGTTGAAATTTACCATAGATGCGGCTACGTTGAAATGCACCA
TAGATAATGTGTTGCTGGATAAGCGCCCTTTATGCCGGTCCCTGTCAGTC
TACATCAGTAGATCTAGTAGCACGAATTCAATACGAGTTCTGCAAAACGG
CGTCGGTAGACATCCTCAAGTCGCCTCCGGAGAGTGGTTGGTGTGTTCAG
TAGCAAGAGAGGCGATAGCGAACACTCGCCAACATTGAATGTGTGTGTAT
GTGCCCGCGGCCGAGGAAACGCAACTAGTTTGTGCCTTTGATTTGAAAGC
CCACGGGGGGACAGACGCGGGTTGCCCCCGCAATAGACGAGTTCTCCTTC
TCCTAGACGAGAGCGTGCAGTTGCTATCCCTTGTGTTCGTTCAGAGGGCT
TTTTTAGGGAGTGTTGGCTTTGAAGAAGCGCGGGGTGAAGGGTGACAAGA
GGCAGGCGACCAGGGGTGGAGGATAAATAAACAACTTGGTGTTTGCATC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1477:9883..15531-

>mRNA_Ecto-sp13_S_contig1477.3641.1 ID=mRNA_Ecto-sp13_S_contig1477.3641.1|Name=mRNA_Ecto-sp13_S_contig1477.3641.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=900bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1477:9883..15531- (Ectocarpus species13 EcNAP12_S_4_19m)
GGCTTCCTCTCCACTGGGAAACATGTTCAGCAGGGAGATCAACGTCAGCG
CTCTGCTCAAGGCGAACGACATCACGCTGGACGTGCAACGGCATCTGGCG
AACGTCTACGCTGCCCTGGCCGCGACTGTCTTGGCCTGTGCTTTCGGCGC
TGCGGCAGATCTATGGCTGCATGTCGGAGGGCTGCTGACCATGGTCGCAG
GCCTCGGCGCGATGGTGTGGCTCGCGGCCGACCAGGACAAGAACAACTAC
CCCAAGAGGGTTGGCATCTTGCTCCTCTTTGGCCTCCTGAAGGGCTTTTC
ACTGGGGCCACTGATCGACATGGTTCTGCACGTGGACCCGTCGATTCTGG
TGACCTCTCTGCTGGCCACCACGACCGTGTTTGTGTGCTTTGCGGGCGCG
GCCCTATTTTCCAAGCGGCGGAGCTACCTCTACCTCGGTGGCTTGCTTTC
CAGCGTCCTGAGCGTGCTGATGGTGGCGTCTCTGCTCAACCATTTTATGC
GCCTGGAGTTCCTCATGAGCGTCCAGCTCTACGGCGGCCTCGCTGTCTTC
TGCGGTTATGTGATATTCGACACCCAGCTGGTGGTGGAGAAGGCTACCCT
CGGAGACAGGGACTTTGCGTGGCACGCGGCCGAGCTGTTCATCGACTTCG
TGGGCATTTTCGTGCGTATCTGCATCATCCTCATGCGCAACAAGGACAAG
GAAGGAGACCGACGCAGCAGCAGGCGCAGCAGCAGCGGCAGCGGCTACTA
CAGCAGTGGGAGCCGCACTGGGCGCACGGCCCGCCGTTGATTGATTTCAC
GGAGCCACCAATCAATCTCAGTCGAGGGTTCCTTGCTGCCCCCCCCCGCT
TAAAAACGCGCCAGCTCTTCGAGTATATTTATCCTTCCTTGAGATTTTAA
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