mRNA_Ecto-sp13_S_contig14768.3639.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14768.3639.1 vs. uniprot
Match: D7G9C3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9C3_ECTSI) HSP 1 Score: 201 bits (512), Expect = 1.100e-57 Identity = 102/105 (97.14%), Postives = 102/105 (97.14%), Query Frame = 1
Query: 43 GTEHEATEAFFSAGGRARTKAQIDQREDCFVLKEGLGAAFLVEPSSGTLAPWGVATVAVTVFNDTPGRYTDKMDITFTGAPTASLPMKVVAEGSPLSLKREALGL 357
GTEHEATEAFFSAGGRARTKAQIDQREDCF LKEGLGAAFLVEPSSGTLAPWGVATVAVTVFNDTPGRYTDKMDIT TGAPTASLPMKVV EGSPLSLKREALGL
Sbjct: 395 GTEHEATEAFFSAGGRARTKAQIDQREDCFALKEGLGAAFLVEPSSGTLAPWGVATVAVTVFNDTPGRYTDKMDITLTGAPTASLPMKVVVEGSPLSLKREALGL 499
BLAST of mRNA_Ecto-sp13_S_contig14768.3639.1 vs. uniprot
Match: A0A0N7L3F5_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L3F5_PLAHL) HSP 1 Score: 59.7 bits (143), Expect = 6.210e-8 Identity = 33/94 (35.11%), Postives = 50/94 (53.19%), Query Frame = 1
Query: 76 SAGGRARTKAQIDQREDCFVLKEGLGAAFLVEPSSGTLAPWGVATVAVTVFNDTPGRYTDKMDITFTGAPTASLPMKVVAEGSPLSLKREALGL 357
S+ GR + ++++ E +L++ G AF + PSS ++ PW V + FN+ PG Y D + TGA L V GSPL+ KR +GL
Sbjct: 1333 SSSGRKYLRQRVEEDEARQILRDNRGVAFDISPSSVSIPPWEQQVVQILCFNNMPGTYVDDIICRATGALPIILHTHVNVVGSPLTFKRNCVGL 1426
BLAST of mRNA_Ecto-sp13_S_contig14768.3639.1 vs. uniprot
Match: A0A7M7PBI8_STRPU (Uncharacterized protein n=2 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7PBI8_STRPU) HSP 1 Score: 57.0 bits (136), Expect = 5.430e-7 Identity = 31/87 (35.63%), Postives = 48/87 (55.17%), Query Frame = 1
Query: 79 AGGRARTKAQIDQREDCFVLKEGLGAAFLVEPSSGTLAPWGVATVAVTVFNDTPGRYTDKMDITFTGAPTASLPMKVVAEGSPLSLK 339
A R+++ AQ +L+EG GAAFLV+P SG L P+ VAVT ++D G YTD+++ + +P+ + G PL +
Sbjct: 1158 ADPRSKSLAQSQTDSMKAILREGQGAAFLVQPCSGILEPFATLEVAVTAYSDMWGNYTDQLNCEVSNLEPVCIPISLGVTGCPLKFQ 1244
BLAST of mRNA_Ecto-sp13_S_contig14768.3639.1 vs. uniprot
Match: A0A3B4CP18_PYGNA (DLEC1 cilia and flagella associated protein n=1 Tax=Pygocentrus nattereri TaxID=42514 RepID=A0A3B4CP18_PYGNA) HSP 1 Score: 54.7 bits (130), Expect = 3.450e-6 Identity = 38/102 (37.25%), Postives = 52/102 (50.98%), Query Frame = 1
Query: 46 TEHEATEAFFSAGGRARTKA----QIDQREDCFV---LKEGLGAAFLVEPSSGTLAPWGVATVAVTVFNDTPGRYTDKMDITFTGAPTASLPMKVVAEGSPL 330
T H A A F+ T A +I+++E FV L G GAAF VEP SGTL P+ AT+ +T F++ G Y D + +PMK+ EG P+
Sbjct: 670 TNHTAIAAPFTIEAEVFTHAVQAKKIEEKEYEFVAGLLAHGKGAAFFVEPESGTLGPFESATINITAFSNMWGEYEDHLICKVGELDPTLVPMKLSVEGCPI 771
BLAST of mRNA_Ecto-sp13_S_contig14768.3639.1 vs. uniprot
Match: A0A6P4YD41_BRABE (deleted in lung and esophageal cancer protein 1-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YD41_BRABE) HSP 1 Score: 53.1 bits (126), Expect = 1.220e-5 Identity = 28/84 (33.33%), Postives = 50/84 (59.52%), Query Frame = 1
Query: 97 TKAQIDQREDCFVLKEGLGAAFLVEPSSGTLAPWGVATVAVTVFNDTPGRYTDKMDITFTGAPTASLPMKVVAEGSPLSLKREA 348
+K+Q+D + +L++G GAAFLV+P++G L P+ TV +T ++D G+Y D + S+P+++ G PL+ + A
Sbjct: 1611 SKSQVDFSQA--LLRDGRGAAFLVQPAAGVLMPFHTVTVEITSYSDIWGQYKDHLICKVKDLAPVSIPVRMTVVGCPLNFQMTA 1692
BLAST of mRNA_Ecto-sp13_S_contig14768.3639.1 vs. uniprot
Match: UPI001864A213 (deleted in lung and esophageal cancer protein 1 n=3 Tax=Serrasalmidae TaxID=42495 RepID=UPI001864A213) HSP 1 Score: 52.0 bits (123), Expect = 3.060e-5 Identity = 27/66 (40.91%), Postives = 38/66 (57.58%), Query Frame = 1
Query: 133 VLKEGLGAAFLVEPSSGTLAPWGVATVAVTVFNDTPGRYTDKMDITFTGAPTASLPMKVVAEGSPL 330
+L G GAAF VEP SGTL P+ AT+ +T F++ G+Y D + +PMK+ EG P+
Sbjct: 1116 LLTHGKGAAFFVEPESGTLGPFETATINITAFSNMWGKYEDHLICKVGELDPTLIPMKLSVEGCPV 1181
BLAST of mRNA_Ecto-sp13_S_contig14768.3639.1 vs. uniprot
Match: A0A1S3JXK0_LINUN (deleted in lung and esophageal cancer protein 1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JXK0_LINUN) HSP 1 Score: 51.2 bits (121), Expect = 5.690e-5 Identity = 31/82 (37.80%), Postives = 44/82 (53.66%), Query Frame = 1
Query: 88 RARTKAQIDQREDCFV-LKEGLGAAFLVEPSSGTLAPWGVATVAVTVFNDTPGRYTDKMDITFTGAPTASLPMKVVAEGSPL 330
++ TKAQ E C V L++G GAAF ++PSSG L P+ + +T FND G Y DK+ +P+ + G PL
Sbjct: 1115 KSTTKAQA---EFCQVMLRDGKGAAFSIQPSSGVLEPFSELMIEITAFNDMWGHYQDKLVCKVDKLDIVQIPVTMTVVGCPL 1193
BLAST of mRNA_Ecto-sp13_S_contig14768.3639.1 vs. uniprot
Match: R7VKQ0_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7VKQ0_CAPTE) HSP 1 Score: 50.8 bits (120), Expect = 7.770e-5 Identity = 28/66 (42.42%), Postives = 39/66 (59.09%), Query Frame = 1
Query: 133 VLKEGLGAAFLVEPSSGTLAPWGVATVAVTVFNDTPGRYTDKMDITFTGAPTASLPMKVVAEGSPL 330
+L EG GAAF+VEP SG L P+G + +T F+D G+YTD++ + MK+ GSPL
Sbjct: 1160 MLLEGKGAAFVVEPPSGQLQPFGQQRIQLTAFSDIWGQYTDQLICKIGDLEAQRIEMKMGVIGSPL 1225 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14768.3639.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14768.3639.1 >prot_Ecto-sp13_S_contig14768.3639.1 ID=prot_Ecto-sp13_S_contig14768.3639.1|Name=mRNA_Ecto-sp13_S_contig14768.3639.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=119bp SRTSSIALSLHQPTGTEHEATEAFFSAGGRARTKAQIDQREDCFVLKEGLback to top mRNA from alignment at Ecto-sp13_S_contig14768:2071..2769+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14768.3639.1 ID=mRNA_Ecto-sp13_S_contig14768.3639.1|Name=mRNA_Ecto-sp13_S_contig14768.3639.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=699bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14768:2071..2769+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14768:2071..2769+ >mRNA_Ecto-sp13_S_contig14768.3639.1 ID=mRNA_Ecto-sp13_S_contig14768.3639.1|Name=mRNA_Ecto-sp13_S_contig14768.3639.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=357bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14768:2071..2769+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |