mRNA_Ecto-sp13_S_contig14762.3637.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14762.3637.1 vs. uniprot
Match: A0A6H5L1D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1D3_9PHAE) HSP 1 Score: 342 bits (877), Expect = 2.880e-114 Identity = 169/227 (74.45%), Postives = 203/227 (89.43%), Query Frame = 1
Query: 283 VAESTQESLARLKDLQAPNYLYPRLVVVKEIDSGRASSRASGKKNILSKFRGVVKKEMMLHFLCPVNMSKVPCGYGGEGYRFRETRDWVKKISPVLQVAAVTAKVALKATTGLDVNTSDFLRDMKDGLVDQLVDRTLDEDMLLRVLSGEEDVGADMQKDTRASYEALKKFMDKEQVDRLKNARDGDGYVDFRDKMKRVSDGRGGMVWIRNENVQRWLYLHSNNSPSR 963
V ESTQESL R++ LQAPNY YPRLVVVKE+ S +S+A GKK++LSK R + KK+M LHFLCPV+M+KVPCGYGGEGYRF+ETR WVKKISPVLQVA VTAKVAL ATTGLDV+ S+FL+D+KDGLV++LVDRTLDE LLR +SG++D+GA++Q+DTRASYEALKKFMDKEQVDR+KNARDGDGY+DFRD+MKRV+DGRGGMVW+RN+NVQ+WL HS +P+R
Sbjct: 71 VLESTQESLMRIRHLQAPNYRYPRLVVVKEVGSDGTASKAHGKKSLLSKLRRLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTAKVALNATTGLDVDISNFLKDVKDGLVNELVDRTLDE-ALLRAVSGDDDIGAELQRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 296
BLAST of mRNA_Ecto-sp13_S_contig14762.3637.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI) HSP 1 Score: 359 bits (921), Expect = 6.960e-111 Identity = 180/227 (79.30%), Postives = 199/227 (87.67%), Query Frame = 1
Query: 283 VAESTQESLARLKDLQAPNYLYPRLVVVKEIDSGRASSRASGKKNILSKFRGVVKKEMMLHFLCPVNMSKVPCGYGGEGYRFRETRDWVKKISPVLQVAAVTAKVALKATTGLDVNTSDFLRDMKDGLVDQLVDRTLDEDMLLRVLSGEEDVGADMQKDTRASYEALKKFMDKEQVDRLKNARDGDGYVDFRDKMKRVSDGRGGMVWIRNENVQRWLYLHSNNSPSR 963
V ++TQE L RLK+LQAPNYLYPRLV V+E+ SG SRA G K +LSK RGV KKEM+LHFLCPV+M+KVPCGYGGEGYRFRETR WVKKISPVLQVA VTAKVAL AT GL+VN S+FL+D+KDGL D+LVDR+LDED LLRV+SGEEDV ADMQ DTRASYEALKK MDKEQV RLKNARDGDGY+DFRDKMKRV DGRGGMVW+RNENVQRWL HSN +PSR
Sbjct: 1019 VFKNTQEILMRLKNLQAPNYLYPRLVAVEEVASGSTPSRAHGMKRVLSKLRGVGKKEMVLHFLCPVDMTKVPCGYGGEGYRFRETRGWVKKISPVLQVAVVTAKVALNATAGLNVNISEFLKDVKDGLADELVDRSLDEDALLRVVSGEEDVDADMQNDTRASYEALKKLMDKEQVGRLKNARDGDGYIDFRDKMKRVPDGRGGMVWVRNENVQRWLDSHSNTAPSR 1245
BLAST of mRNA_Ecto-sp13_S_contig14762.3637.1 vs. uniprot
Match: A0A6H5K516_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K516_9PHAE) HSP 1 Score: 348 bits (894), Expect = 1.680e-110 Identity = 169/227 (74.45%), Postives = 205/227 (90.31%), Query Frame = 1
Query: 283 VAESTQESLARLKDLQAPNYLYPRLVVVKEIDSGRASSRASGKKNILSKFRGVVKKEMMLHFLCPVNMSKVPCGYGGEGYRFRETRDWVKKISPVLQVAAVTAKVALKATTGLDVNTSDFLRDMKDGLVDQLVDRTLDEDMLLRVLSGEEDVGADMQKDTRASYEALKKFMDKEQVDRLKNARDGDGYVDFRDKMKRVSDGRGGMVWIRNENVQRWLYLHSNNSPSR 963
V ESTQESL R+++LQAPNY YPRLVVVKE+ S +S+A GKK++LSK R + KK+M LHFLCPV+M+KVPCGYGGEGYRF+ETR WVKKISPVLQVA VTA+VAL ATTGLDVN S+FL+D+KDGLV++LVDRTLDE+ LLR +SG++D+GA++Q+DTRASYEALKKFMDKEQVDR+KNARDGDGY+DFRD+MKRV+DGRGGMVW+RN+NVQ+WL HS +P+R
Sbjct: 571 VLESTQESLMRIRNLQAPNYRYPRLVVVKEVGSDGTASKAHGKKSVLSKLRRLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTARVALNATTGLDVNISNFLQDVKDGLVNELVDRTLDEEALLRAVSGDDDIGAELQRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 797
BLAST of mRNA_Ecto-sp13_S_contig14762.3637.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE) HSP 1 Score: 345 bits (884), Expect = 1.770e-107 Identity = 166/227 (73.13%), Postives = 205/227 (90.31%), Query Frame = 1
Query: 283 VAESTQESLARLKDLQAPNYLYPRLVVVKEIDSGRASSRASGKKNILSKFRGVVKKEMMLHFLCPVNMSKVPCGYGGEGYRFRETRDWVKKISPVLQVAAVTAKVALKATTGLDVNTSDFLRDMKDGLVDQLVDRTLDEDMLLRVLSGEEDVGADMQKDTRASYEALKKFMDKEQVDRLKNARDGDGYVDFRDKMKRVSDGRGGMVWIRNENVQRWLYLHSNNSPSR 963
V EST+ESL R+++LQAPNY YPRLVVVKE+ + +S+A GKK++LSK R + KK+M LHFLCPV+M+KVPCGYGGEGYRF+ETR WVKKISPVLQVA VTAKVAL ATTGLDV+ S+FL+D+KDGLV++LVDRT+DE+ LLR +SG++D+GA++Q+DTRASYEALKKFMDKEQVDR+KNARDGDGY+DFRD+MKRV+DGRGGMVW+RN+NVQ+WL HS +P+R
Sbjct: 739 VLESTKESLMRIRNLQAPNYRYPRLVVVKEVGADGTASKAHGKKSVLSKLRRLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTAKVALNATTGLDVDISNFLKDVKDGLVNELVDRTIDEEALLRAVSGDDDIGAELQRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 965
BLAST of mRNA_Ecto-sp13_S_contig14762.3637.1 vs. uniprot
Match: A0A6H5JYD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD1_9PHAE) HSP 1 Score: 336 bits (862), Expect = 2.480e-106 Identity = 167/227 (73.57%), Postives = 201/227 (88.55%), Query Frame = 1
Query: 283 VAESTQESLARLKDLQAPNYLYPRLVVVKEIDSGRASSRASGKKNILSKFRGVVKKEMMLHFLCPVNMSKVPCGYGGEGYRFRETRDWVKKISPVLQVAAVTAKVALKATTGLDVNTSDFLRDMKDGLVDQLVDRTLDEDMLLRVLSGEEDVGADMQKDTRASYEALKKFMDKEQVDRLKNARDGDGYVDFRDKMKRVSDGRGGMVWIRNENVQRWLYLHSNNSPSR 963
V ESTQESL R++ LQAPNY YPRLVVVKE+ S +S+A GKK++LSK R + KK+M LHFLCPV+M+KVPCGYGGEGYRF+ETR WVKKISPVLQVA VTAKVAL ATTGLDV+ S+FL+D+KDGLV++LVDRTLDE LLR +SG++D+GA++Q DTRASYEALKKFMD+EQVDR+KNARDGDGY+D RD+MKRV+DGRGGMVW+RN+NVQ+WL HS +P+R
Sbjct: 515 VLESTQESLMRIRHLQAPNYRYPRLVVVKEVGSDGTASKAHGKKSLLSKLRLLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTAKVALNATTGLDVDISNFLKDVKDGLVNELVDRTLDE-ALLRAVSGDDDIGAELQTDTRASYEALKKFMDQEQVDRVKNARDGDGYIDLRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 740
BLAST of mRNA_Ecto-sp13_S_contig14762.3637.1 vs. uniprot
Match: A0A6H5KSY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY4_9PHAE) HSP 1 Score: 324 bits (830), Expect = 4.590e-104 Identity = 164/228 (71.93%), Postives = 195/228 (85.53%), Query Frame = 1
Query: 283 VAESTQESLARLKDLQAPNYLYPRLVVVKEIDSGRASSRASGKKNIL-SKFRGVVKKEMMLHFLCPVNMSKVPCGYGGEGYRFRETRDWVKKISPVLQVAAVTAKVALKATTGLDVNTSDFLRDMKDGLVDQLVDRTLDEDMLLRVLSGEEDVGADMQKDTRASYEALKKFMDKEQVDRLKNARDGDGYVDFRDKMKRVSDGRGGMVWIRNENVQRWLYLHSNNSPSR 963
V ES+QESL RLKDLQA NY YPRLV+VKE SS+A+G K L +KFRGV KK+M LHFLCPV+M+KVPCGYGGEGYRF+ETRDWVKKISPVLQVA VTAKVAL ATTGL+V+ SDFL+D+KDGLV++LVDRTLDED LLR + GE+ +GADMQ+DTRASYEALK FM+ E+ R KNARDGDGY+DFR++MKRV++GRGGMVW+RN+NVQ+WL S +P+R
Sbjct: 294 VLESSQESLMRLKDLQALNYRYPRLVIVKEAGICGRSSKATGWKRFLPNKFRGVGKKDMALHFLCPVDMTKVPCGYGGEGYRFQETRDWVKKISPVLQVAVVTAKVALNATTGLNVDISDFLKDVKDGLVEELVDRTLDEDALLRAVLGEDSIGADMQRDTRASYEALKVFMENEERRRRKNARDGDGYIDFREEMKRVTNGRGGMVWVRNDNVQKWLESRSTAAPTR 521
BLAST of mRNA_Ecto-sp13_S_contig14762.3637.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI) HSP 1 Score: 336 bits (861), Expect = 5.460e-102 Identity = 164/227 (72.25%), Postives = 199/227 (87.67%), Query Frame = 1
Query: 283 VAESTQESLARLKDLQAPNYLYPRLVVVKEIDSGRASSRASGKKNILSKFRGVVKKEMMLHFLCPVNMSKVPCGYGGEGYRFRETRDWVKKISPVLQVAAVTAKVALKATTGLDVNTSDFLRDMKDGLVDQLVDRTLDEDMLLRVLSGEEDVGADMQKDTRASYEALKKFMDKEQVDRLKNARDGDGYVDFRDKMKRVSDGRGGMVWIRNENVQRWLYLHSNNSPSR 963
V ESTQESL RL+DLQAPNY YPRLVVVKE+ S +S+A G+K++LSK GV KK+M L FLCPV+M++VPCGYGGEGYRF+ETR WVKKISPVLQVA VTAKVAL ATTGL V+ SDFL+D+KDGLV++LVDRTLD++ LLR + G++++GAD+Q+DTRASYEALKKFMDKEQ++R+KN RDGDGY+DFRD+MKRV DGRGGMVW+RNENVQ+WL S +P+R
Sbjct: 1086 VLESTQESLMRLRDLQAPNYRYPRLVVVKEVGSDGTASKARGRKSMLSKLCGVGKKDMTLQFLCPVDMTQVPCGYGGEGYRFKETRSWVKKISPVLQVAVVTAKVALNATTGLHVDISDFLKDVKDGLVEELVDRTLDDEALLRAVLGDDNIGADLQRDTRASYEALKKFMDKEQIERVKNTRDGDGYIDFRDEMKRVPDGRGGMVWVRNENVQKWLDSRSIAAPTR 1312
BLAST of mRNA_Ecto-sp13_S_contig14762.3637.1 vs. uniprot
Match: D7G431_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI) HSP 1 Score: 330 bits (847), Expect = 3.600e-101 Identity = 163/227 (71.81%), Postives = 200/227 (88.11%), Query Frame = 1
Query: 283 VAESTQESLARLKDLQAPNYLYPRLVVVKEIDSGRASSRASGKKNILSKFRGVVKKEMMLHFLCPVNMSKVPCGYGGEGYRFRETRDWVKKISPVLQVAAVTAKVALKATTGLDVNTSDFLRDMKDGLVDQLVDRTLDEDMLLRVLSGEEDVGADMQKDTRASYEALKKFMDKEQVDRLKNARDGDGYVDFRDKMKRVSDGRGGMVWIRNENVQRWLYLHSNNSPSR 963
V ESTQESL RLK+LQAPNYLYPRLVVVKE+ SG SS+A GKK++L+K RG+ KK+M LHFLCPV+M++VPCGYGGEG+RF++TR WV+KISPVLQVA VTAKVAL ATTGL+V+ SDFL+D++DGLV +LVDRTLDE L RV++GEE +GADMQ+ TRASYEALKKFMDKE++ R K+A+DGDGYV FRD+MKRV+DG+GGMVW+RN+NVQ+WL S +P+R
Sbjct: 867 VLESTQESLMRLKNLQAPNYLYPRLVVVKEVGSGGTSSKAHGKKSMLTKLRGLAKKDMTLHFLCPVDMTRVPCGYGGEGHRFKQTRGWVRKISPVLQVAVVTAKVALNATTGLNVDPSDFLKDVRDGLVGELVDRTLDEHALRRVVTGEEAIGADMQRGTRASYEALKKFMDKEEIKRCKDAKDGDGYVHFRDEMKRVADGKGGMVWVRNKNVQKWL--ESRAAPTR 1091
BLAST of mRNA_Ecto-sp13_S_contig14762.3637.1 vs. uniprot
Match: D8LCS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI) HSP 1 Score: 333 bits (854), Expect = 2.560e-100 Identity = 171/219 (78.08%), Postives = 192/219 (87.67%), Query Frame = 1
Query: 292 STQESLARLKDLQAPNYLYPRLVVVKEIDSGRASSRASGKKNILSKFRGVVKKEMMLHFLCPVNMSKVPCGYGGEGYRFRETRDWVKKISPVLQVAAVTAKVALKATTGLDVNTSDFLRDMKDGLVDQLVDRTLDEDMLLRVLSGEEDVGADMQKDTRASYEALKKFMDKEQVDRLKNARDGDGYVDFRDKMKRVSDGRGGMVWIRNENVQRWLYLHSN 948
+TQESL RLK+LQAPNYLYP LV V+E + S A G K++L K RGV K+M LHFLCPV+M+KVPCGYGG+GYRFRETR WVKKISPVLQVA VTAKVALKAT+GLDV+ SDFL+D+KDGLV +LVD TLDED LLR++SGEEDVGADM+KDTRASYEALKKFMDKEQ+DRLKNARDGDGYVDFRDKMKRV+DGRGGMVWIRNENVQ+W SN
Sbjct: 1305 TTQESLMRLKNLQAPNYLYPGLVAVEETGADGTPSGARGMKSMLHKVRGV-GKDMTLHFLCPVDMTKVPCGYGGKGYRFRETRGWVKKISPVLQVALVTAKVALKATSGLDVDLSDFLKDVKDGLVGELVDPTLDEDALLRIVSGEEDVGADMRKDTRASYEALKKFMDKEQMDRLKNARDGDGYVDFRDKMKRVADGRGGMVWIRNENVQQWTDSRSN 1522
BLAST of mRNA_Ecto-sp13_S_contig14762.3637.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI) HSP 1 Score: 323 bits (828), Expect = 8.190e-99 Identity = 159/227 (70.04%), Postives = 196/227 (86.34%), Query Frame = 1
Query: 283 VAESTQESLARLKDLQAPNYLYPRLVVVKEIDSGRASSRASGKKNILSKFRGVVKKEMMLHFLCPVNMSKVPCGYGGEGYRFRETRDWVKKISPVLQVAAVTAKVALKATTGLDVNTSDFLRDMKDGLVDQLVDRTLDEDMLLRVLSGEEDVGADMQKDTRASYEALKKFMDKEQVDRLKNARDGDGYVDFRDKMKRVSDGRGGMVWIRNENVQRWLYLHSNNSPSR 963
V ESTQESLARLK+LQAPNY YPRLVVVKE+ S SS+A GKK++LSK RG+ KK+M LHFLCPV+M+ VPCGYGGEGY+F+ETR WVK++SP LQV VTAKVAL A TGL+V+ SDFL+D+KDGLV++LVDRTLDED LLR +SG++ VGAD+Q+DTRASYEALK FM+ E+ R KNARDGDGY++FR++MKR+ DGRGG VW+RNENV++WL +S+ +PSR
Sbjct: 806 VLESTQESLARLKNLQAPNYHYPRLVVVKEVGSHGTSSKAHGKKSMLSKLRGLGKKDMRLHFLCPVDMTTVPCGYGGEGYQFQETRAWVKRVSPALQVTVVTAKVALNAVTGLNVDISDFLKDVKDGLVEELVDRTLDEDALLRAVSGDDTVGADLQRDTRASYEALKVFMENEERRRRKNARDGDGYIEFREEMKRLPDGRGGEVWVRNENVRKWLASNSSPAPSR 1032 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14762.3637.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14762.3637.1 >prot_Ecto-sp13_S_contig14762.3637.1 ID=prot_Ecto-sp13_S_contig14762.3637.1|Name=mRNA_Ecto-sp13_S_contig14762.3637.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=322bp MNEMAVTAVKGALGEMDGRFGKIQGGIDEVHSAVNRGRGEMVGGLDEVKEback to top mRNA from alignment at Ecto-sp13_S_contig14762:1762..3054+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14762.3637.1 ID=mRNA_Ecto-sp13_S_contig14762.3637.1|Name=mRNA_Ecto-sp13_S_contig14762.3637.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1293bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14762:1762..3054+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14762:1762..3054+ >mRNA_Ecto-sp13_S_contig14762.3637.1 ID=mRNA_Ecto-sp13_S_contig14762.3637.1|Name=mRNA_Ecto-sp13_S_contig14762.3637.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=966bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14762:1762..3054+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |