mRNA_Ecto-sp13_S_contig14758.3636.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14758.3636.1
Unique NamemRNA_Ecto-sp13_S_contig14758.3636.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14758.3636.1 vs. uniprot
Match: D8LU34_ECTSI (U-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU34_ECTSI)

HSP 1 Score: 323 bits (827), Expect = 8.080e-102
Identity = 165/176 (93.75%), Postives = 166/176 (94.32%), Query Frame = 1
Query:   19 IGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQEDLLPKATSTMRRLQLLPASSMADMDSLCRRAMTTLHWIVEPSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFLARRGSQSG 546
            IGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQEDLLPKATSTMRRLQLLPASSMADMDSLC  A+       E SEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFLARRGSQSG
Sbjct:  786 IGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQEDLLPKATSTMRRLQLLPASSMADMDSLCS-AVIEARASYEASEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFLARRGSQSG 960          
BLAST of mRNA_Ecto-sp13_S_contig14758.3636.1 vs. uniprot
Match: A0A7S4QYQ6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QYQ6_9STRA)

HSP 1 Score: 195 bits (496), Expect = 8.740e-55
Identity = 94/175 (53.71%), Postives = 125/175 (71.43%), Query Frame = 1
Query:   13 KQIGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQEDLLPKATSTMRRLQLLPASSMADMDSLCRRAMTTLHWIVEPSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFLARRGS 537
            K +GSKGLE+KVDNPE+YNFRPKEMLR++C   + FS+   F    A SGYY  DL+ K+  T R+L LL   SM   +SL  +  T    + +  +A + + PDEFLDP++C  M+DPVLLPTSGT++DRSTI+QHLLND +DPFNR+PLT DM+ P TEL+E++E +L  + S
Sbjct:  699 KLVGSKGLELKVDNPENYNFRPKEMLRDLCAIFASFSSAHEFQVECAKSGYYNTDLMTKSVKTCRKLNLLTGESMELFESLAEKVKTASKHVGD-DDALVADAPDEFLDPLMCTFMKDPVLLPTSGTVIDRSTIMQHLLNDPVDPFNRKPLTVDMIIPATELKEKMENWLEEKRS 872          
BLAST of mRNA_Ecto-sp13_S_contig14758.3636.1 vs. uniprot
Match: A0A7S0CIR3_9STRA (Hypothetical protein n=3 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CIR3_9STRA)

HSP 1 Score: 172 bits (435), Expect = 3.230e-51
Identity = 89/179 (49.72%), Postives = 120/179 (67.04%), Query Frame = 1
Query:   13 KQIGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQEDLLPKATSTMRRLQLLPA--------SSMADMDSLCRR-AMTTLHWIVEPSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFL 522
            K +GSKGLE+KVDNPE+YNFRP+EMLR++C+  + F++ P F    A SGYY  DL+ K   T ++L LL +        S M   +SL    A+ +++  V+  EA   + PDEFLDP++C  M+DPVLLPTS  I+DRSTI QHLLND  DPFNR+ LT DMV P  EL+ R++ ++
Sbjct:    8 KLVGSKGLELKVDNPETYNFRPREMLRDLCSIFASFASAPEFQLECAKSGYYSADLMEKTIRTCKKLNLLDSATSTVLGMSQMELFESLPSHIALQSIN--VQDDEALTNDAPDEFLDPLMCTFMKDPVLLPTSDNIIDRSTITQHLLNDPHDPFNRKDLTIDMVVPAVELKNRMDAWM 184          
BLAST of mRNA_Ecto-sp13_S_contig14758.3636.1 vs. uniprot
Match: A0A7S2PEU3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PEU3_9STRA)

HSP 1 Score: 182 bits (462), Expect = 7.010e-50
Identity = 96/176 (54.55%), Postives = 122/176 (69.32%), Query Frame = 1
Query:   13 KQIGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQEDLLPKATSTMRRLQLLPASSMADMDSLCRRAMTTLHWIVEPS------EASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFL 522
            K IGSKGLE+KVDNPESYNFRPKEMLR++C   S FS    F    A SGY ++DL+ KA  T ++L LL  +SM +  SL        H++++ S      EA   + PDEFLDP++   MR+PVLLPTSGTI DRSTI+QHLLND  DPFNR+PLT + V+P TEL+E+I+ +L
Sbjct:  939 KLIGSKGLELKVDNPESYNFRPKEMLRDVCQIFSTFSCSREFQLECAKSGYVKDDLITKAVKTCQKLALLTGTSMENFASLP-------HYMIQASKDIADDEALTVDAPDEFLDPLMVTFMRNPVLLPTSGTICDRSTIMQHLLNDPTDPFNRKPLTMEEVQPATELKEKIDAWL 1107          
BLAST of mRNA_Ecto-sp13_S_contig14758.3636.1 vs. uniprot
Match: A0A835Z369_9STRA (Ubiquitin elongating factor core-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z369_9STRA)

HSP 1 Score: 181 bits (460), Expect = 8.150e-50
Identity = 89/171 (52.05%), Postives = 123/171 (71.93%), Query Frame = 1
Query:   19 IGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPG-FHKHLAMSGYYQEDLLPKATSTMRRLQLLPASSMADMDSLCRRAMTTLHWIVEPSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFLAR 528
            +G KGLEIKVDNPESYNFRPK+ML  +   ++ F+     F + +A  G+YQ  LLPKA +T+R+L LL   S+A +D LC  ++          +  LG+VP+EFLDP++C +M+DPV LPTSG I+DR+TI+QHLLND  DPFNR+PL+ DM++PQ EL+ RI+ +LA+
Sbjct:  694 VGKKGLEIKVDNPESYNFRPKDMLASVMAVVAHFADAGADFDRAVATCGFYQAQLLPKAAATVRKLGLLDMVSLAAVDKLCG-SVAAAAADANAMDEELGDVPEEFLDPLMCTIMQDPVGLPTSGQIVDRATIMQHLLNDETDPFNRKPLSVDMLQPQVELKARIDAYLAK 863          
BLAST of mRNA_Ecto-sp13_S_contig14758.3636.1 vs. uniprot
Match: A0A7S2A739_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A739_TRICV)

HSP 1 Score: 173 bits (439), Expect = 1.180e-47
Identity = 88/170 (51.76%), Postives = 115/170 (67.65%), Query Frame = 1
Query:   13 KQIGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQEDLLPKATSTMRRLQLLPASSMADMDSLCRRAMTTLHWIVEPSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFL 522
            K +GSKGLE+KVDNPESY+FRPK+MLR++C   + F++   F    A SGYY  DL+ K+  T R+L LL  ++  +  SL  R        VE  +A   + PDEFLDP++C  MRDPV LPTS +++DR+TI QHLLND  DPFNR+ LT DMV   TELRER+ ++L
Sbjct:  467 KLVGSKGLELKVDNPESYHFRPKDMLRDLCAVFANFASADEFVLECAKSGYYNADLVQKSVRTCRKLGLLTGTAAEEFASLTSRVEHAAR-SVEDFDALTADAPDEFLDPLVCTFMRDPVYLPTSDSVVDRTTIAQHLLNDPHDPFNRKDLTMDMVRDATELRERMGKWL 635          
BLAST of mRNA_Ecto-sp13_S_contig14758.3636.1 vs. uniprot
Match: A0A812RUJ8_SYMMI (PUB1 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RUJ8_SYMMI)

HSP 1 Score: 169 bits (429), Expect = 6.820e-47
Identity = 89/180 (49.44%), Postives = 121/180 (67.22%), Query Frame = 1
Query:   10 AKQIGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQED----LLPKATSTMRRLQLLPASSMADMDSLCRRAMTTLHWIVEPSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFLARRGS 537
            +K +G +GLEIKVDN ESYNF P+ +L+EIC T+S FS    F   +A  G+Y+ +     L KA +T+R+L LL ++ M  + SL   A        +  + +  E P+EFLDP++  +MRDPV LPTS  I+DRSTI QHLLND +DPFNR+PLT DM+EPQTEL+ RI E+L + G+
Sbjct:  346 SKIVGQRGLEIKVDNMESYNFNPRIILQEICVTMSHFSACEKFWVAVAGDGFYETNDGKVPLEKAVATVRKLNLLTSAQMTALSSLLENAAKARSSYKDIDDLT-NEAPEEFLDPLMATIMRDPVFLPTSANIVDRSTITQHLLNDEIDPFNRKPLTADMLEPQTELKSRIMEWLRQHGA 524          
BLAST of mRNA_Ecto-sp13_S_contig14758.3636.1 vs. uniprot
Match: A0A7R9Z2J3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z2J3_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.520e-46
Identity = 84/170 (49.41%), Postives = 114/170 (67.06%), Query Frame = 1
Query:   13 KQIGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQEDLLPKATSTMRRLQLLPASSMADMDSLCRRAMTTLHWIVEPSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFL 522
            K +G+KGLE+KVDNPESYNFRPK+MLR++C   + F++   F    A SGYY+ +L+ K+  T +RLQLL   +M +  +L  R        VE  +A   + P+EFLDP++   MRDPV LPTS  ++DR+TI QHLLND  DPFNR+ LT DMV+   EL+E I+ +L
Sbjct:  270 KLVGTKGLELKVDNPESYNFRPKDMLRDLCAIFANFASADEFVLECAKSGYYEAELVQKSVKTCQRLQLLTGEAMDEFAALTGRVEVASR-TVEDFDALTADAPEEFLDPLMYTFMRDPVYLPTSDKVVDRATITQHLLNDPHDPFNRKDLTMDMVKDAPELKESIDRWL 438          
BLAST of mRNA_Ecto-sp13_S_contig14758.3636.1 vs. uniprot
Match: A0A7S1GIE2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GIE2_CYCTE)

HSP 1 Score: 167 bits (423), Expect = 1.200e-45
Identity = 86/173 (49.71%), Postives = 114/173 (65.90%), Query Frame = 1
Query:   13 KQIGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQEDLLPKATSTMRRLQLLPASSM---ADMDSLCRRAMTTLHWIVEPSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFL 522
            K +GSKGLE+KV+NPE YNFRPKEMLR++C   + F+    F    A SGYY  DL+ K+  T R+  LL   SM   + +  L   A+      V   +A L + PDEFLDP++   M+DPVLLPTS TI+DR+TI QHLLND  DPFNR+ LT +M+ P TEL+E++ ++L
Sbjct:  406 KLVGSKGLELKVENPEEYNFRPKEMLRDLCAIFALFANSSDFQTECAKSGYYNLDLVSKSVKTCRKFNLLTGESMDAFSALPDLIEAAVKN----VASDDALLTDAPDEFLDPLMFTFMKDPVLLPTSETIIDRATITQHLLNDPHDPFNRKELTIEMIVPATELKEKMAKWL 574          
BLAST of mRNA_Ecto-sp13_S_contig14758.3636.1 vs. uniprot
Match: F0X1Z8_9STRA (Ubiquitin conjugation factor E4 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0X1Z8_9STRA)

HSP 1 Score: 168 bits (426), Expect = 4.860e-45
Identity = 79/171 (46.20%), Postives = 115/171 (67.25%), Query Frame = 1
Query:   13 KQIGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQEDLLPKATSTMRRLQLLPASSMADMDSLCRRAMTTLHWIVEPSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFLA 525
            K  G +GLE+KV+NPE Y FRPKEML+E+  T+  F+    F   +A++G+Y+E +  K ++ +RR QLLP   +A  D   R        +V+  EA LGE+PDEF+DP++C +M+DPV+LPTSG  +DR+TI QHLLND  DPF R PLT D + P  +L+ +++ ++A
Sbjct:  890 KLAGPRGLELKVNNPEQYRFRPKEMLKEVVETLLHFAEFTSFQGAVAVNGFYEEKIFSKCSNILRRTQLLPEQVIAKFDVFLRNVAQRASQLVK-DEAMLGEIPDEFMDPLVCTLMKDPVILPTSGYTMDRATITQHLLNDQSDPFTRAPLTIDQLVPNVQLKAQVDAWMA 1059          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14758.3636.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU34_ECTSI8.080e-10293.75U-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S4QYQ6_9STRA8.740e-5553.71Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S0CIR3_9STRA3.230e-5149.72Hypothetical protein n=3 Tax=Proboscia inermis Tax... [more]
A0A7S2PEU3_9STRA7.010e-5054.55Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A835Z369_9STRA8.150e-5052.05Ubiquitin elongating factor core-domain-containing... [more]
A0A7S2A739_TRICV1.180e-4751.76Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A812RUJ8_SYMMI6.820e-4749.44PUB1 protein (Fragment) n=1 Tax=Symbiodinium micro... [more]
A0A7R9Z2J3_9STRA1.520e-4649.41Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S1GIE2_CYCTE1.200e-4549.71Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
F0X1Z8_9STRA4.860e-4546.20Ubiquitin conjugation factor E4 putative n=1 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14758contigEcto-sp13_S_contig14758:985..2471 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score326.2
Seed ortholog evalue9.5e-87
Seed eggNOG ortholog2880.D8LU34
Preferred nameUBE4B
Model size549
KEGG koko:K10596,ko:K10597
KEGG Pathwayko04120,ko04141,map04120,map04141
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0000166,GO:0000209,GO:0003007,GO:0003205,GO:0003206,GO:0003208,GO:0003222,GO:0003229,GO:0003231,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006457,GO:0006464,GO:0006508,GO:0006511,GO:0006513,GO:0006807,GO:0006915,GO:0006950,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007507,GO:0007517,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0008626,GO:0009056,GO:0009057,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009636,GO:0009653,GO:0009887,GO:0009888,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0010604,GO:0012501,GO:0014706,GO:0016043,GO:0016567,GO:0016740,GO:0017076,GO:0019222,GO:0019538,GO:0019787,GO:0019899,GO:0019941,GO:0022008,GO:0023052,GO:0030030,GO:0030154,GO:0030163,GO:0030182,GO:0030433,GO:0030554,GO:0031175,GO:0031323,GO:0031325,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031625,GO:0032268,GO:0032270,GO:0032446,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034450,GO:0034976,GO:0035639,GO:0035690,GO:0036094,GO:0036211,GO:0036503,GO:0042221,GO:0042493,GO:0043161,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044424,GO:0044444,GO:0044464,GO:0045471,GO:0046677,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048644,GO:0048666,GO:0048699,GO:0048729,GO:0048731,GO:0048738,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051087,GO:0051117,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051603,GO:0051716,GO:0051865,GO:0055008,GO:0055010,GO:0060255,GO:0060415,GO:0060537,GO:0061061,GO:0061383,GO:0061384,GO:0061630,GO:0061659,GO:0065007,GO:0070647,GO:0070887,GO:0071236,GO:0071310,GO:0071361,GO:0071704,GO:0071840,GO:0072359,GO:0080090,GO:0097159,GO:0097190,GO:0097237,GO:0097305,GO:0097306,GO:0097367,GO:0120036,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901700,GO:1901701,GO:1902494,GO:1903320,GO:1903322,GO:1990234
Exons4
EggNOG free text desc.peptidyl-tyrosine sulfation
EggNOG OGsCOG5113@1,KOG2042@2759
EC2.3.2.27
Cds size549
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462787.4511685-CDS-Ecto-sp13_S_contig14758:984..11291681462787.4511685-CDS-Ecto-sp13_S_contig14758:984..1129Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14758 985..1129 -
1681462787.4642444-CDS-Ecto-sp13_S_contig14758:1593..17021681462787.4642444-CDS-Ecto-sp13_S_contig14758:1593..1702Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14758 1594..1702 -
1681462787.4744594-CDS-Ecto-sp13_S_contig14758:1958..21091681462787.4744594-CDS-Ecto-sp13_S_contig14758:1958..2109Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14758 1959..2109 -
1681462787.483043-CDS-Ecto-sp13_S_contig14758:2327..24711681462787.483043-CDS-Ecto-sp13_S_contig14758:2327..2471Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14758 2328..2471 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14758.3636.1prot_Ecto-sp13_S_contig14758.3636.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14758 985..2471 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14758.3636.1

>prot_Ecto-sp13_S_contig14758.3636.1 ID=prot_Ecto-sp13_S_contig14758.3636.1|Name=mRNA_Ecto-sp13_S_contig14758.3636.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=183bp
FNCAKQIGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHL
AMSGYYQEDLLPKATSTMRRLQLLPASSMADMDSLCRRAMTTLHWIVEPS
EASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPF
NRQPLTEDMVEPQTELRERIEEFLARRGSQSG*
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mRNA from alignment at Ecto-sp13_S_contig14758:985..2471-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14758.3636.1 ID=mRNA_Ecto-sp13_S_contig14758.3636.1|Name=mRNA_Ecto-sp13_S_contig14758.3636.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1487bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14758:985..2471- (Ectocarpus species13 EcNAP12_S_4_19m)
TTCAACTGCGCTAAACAGATCGGGTCCAAGGGGCTGGAGATCAAGGTGGA CAACCCCGAGAGCTACAACTTTAGACCCAAGGAGATGCTGAGAGAGATCT GCACCACCATCTCGCAGTTTTCGACCCAACCCGGCTTCCACAAGGTGTGA TAGATAGCCTTGACATCCCCACTCCTCGCAGTTGTCGACGTGCATGGGCT TGTCACACTGTCCGATAGGTATTGAGATTTTGCCTAAACGTTCTTTCCCT TCTCTGGAGCCCCCTCCCCCCACTTACTTTCGCCCATGTAGCACGTGGCG GTCACTGACCGTCCAAAAACCGTTCCCTGTATCGTGTCACATGCGCTTTT TGCGTGAACCAGCATCTGGCCATGAGCGGGTACTACCAGGAGGACTTGCT TCCCAAGGCGACTTCGACGATGCGCCGCCTTCAGCTACTGCCAGCCTCTT CGATGGCCGACATGGACAGCCTTTGCAGGCGAGCAATGACAACGCTGCAC TGGATCGTTGAACGTTGGAAGTCCTCTGAGGGCGAACAACAAGAGTGTTA TCCCGCACCGTCGGATGTGGAAAGGAAGTATGGCGCGATCCCCGAACAAT TCGGTTTTGACTCACGAATACAGTCGTGCGGCCTCTATAGTGTGGGCCGA TTCACCTGCCCCGTAGGGTAGCAAGCACTCACCCTGTTCAAAGCATGATC ACTTTCGATGTGACTGCTGTTTTATCCATCCATGCAGCGCTGTGATCGAG GCGAGGGCCTCGTACGAAGCTTCGGAGGCGTCTCTGGGCGAAGTCCCGGA CGAGTTCTTGGACCCAGTTCTCTGCCACGTCATGCGAGATCCTGTTCTTC TGCCTACCAGCGGAACAATCTTGGACAGGTGAGGGAGGGGGTAGGGGGAT TCCTCTCTGTTGTTGAGATGTTTGATCGTTGGCCAAGCAACCACCCATTT GTAGACGAGACTGGGCAGGCGACAAAGGACGAAACACGTTTAGTGCCGTG AAACAATAGCGCATCTTGTTTTGTGTTTCGCATGAGCGAGGTTCAGCTTT TGGCGCACGCCGCTGCAAGATACGCACGACAACATGCCATGCGTATTAAT CGGTGAGCGTTTGTTCCACCCTGTGCGTGTCGGAGTGTTGGCATGACATT CGGCGCAGAAGGGCGAGCATGAGTTGCGCATCAGGAGCAGAGCATTTCGC GTCGGTTTCTTTGACGCGACGTTCCCGATTTACCCCTCGTAATCCCCGCA CCCGCGACTGATTTGGGTAGATTCTAGCGCATGATGCCCATCCATCTATT CATGGCACCGATCGAAAACACTCGCTCGTGGCGTCCACACAGGTCCACGA TCGTCCAGCACTTGCTGAACGACAGTATGGATCCTTTTAACCGGCAGCCT CTCACGGAGGACATGGTCGAGCCACAGACCGAGCTTCGCGAACGCATCGA AGAGTTCCTCGCACGGAGAGGAAGCCAGTCTGGTTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14758:985..2471-

>mRNA_Ecto-sp13_S_contig14758.3636.1 ID=mRNA_Ecto-sp13_S_contig14758.3636.1|Name=mRNA_Ecto-sp13_S_contig14758.3636.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=549bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14758:985..2471- (Ectocarpus species13 EcNAP12_S_4_19m)
TTCAACTGCGCTAAACAGATCGGGTCCAAGGGGCTGGAGATCAAGGTGGA
CAACCCCGAGAGCTACAACTTTAGACCCAAGGAGATGCTGAGAGAGATCT
GCACCACCATCTCGCAGTTTTCGACCCAACCCGGCTTCCACAAGCATCTG
GCCATGAGCGGGTACTACCAGGAGGACTTGCTTCCCAAGGCGACTTCGAC
GATGCGCCGCCTTCAGCTACTGCCAGCCTCTTCGATGGCCGACATGGACA
GCCTTTGCAGGCGAGCAATGACAACGCTGCACTGGATCGTTGAACCTTCG
GAGGCGTCTCTGGGCGAAGTCCCGGACGAGTTCTTGGACCCAGTTCTCTG
CCACGTCATGCGAGATCCTGTTCTTCTGCCTACCAGCGGAACAATCTTGG
ACAGGTCCACGATCGTCCAGCACTTGCTGAACGACAGTATGGATCCTTTT
AACCGGCAGCCTCTCACGGAGGACATGGTCGAGCCACAGACCGAGCTTCG
CGAACGCATCGAAGAGTTCCTCGCACGGAGAGGAAGCCAGTCTGGTTGA
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