prot_Ecto-sp13_S_contig14758.3636.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14758.3636.1
Unique Nameprot_Ecto-sp13_S_contig14758.3636.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length183
Homology
BLAST of mRNA_Ecto-sp13_S_contig14758.3636.1 vs. uniprot
Match: D8LU34_ECTSI (U-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU34_ECTSI)

HSP 1 Score: 323 bits (827), Expect = 8.080e-102
Identity = 165/176 (93.75%), Postives = 166/176 (94.32%), Query Frame = 0
Query:    7 IGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQEDLLPKATSTMRRLQLLPASSMADMDSLCRRAMTTLHWIVEPSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFLARRGSQSG 182
            IGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQEDLLPKATSTMRRLQLLPASSMADMDSLC  A+       E SEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFLARRGSQSG
Sbjct:  786 IGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQEDLLPKATSTMRRLQLLPASSMADMDSLCS-AVIEARASYEASEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFLARRGSQSG 960          
BLAST of mRNA_Ecto-sp13_S_contig14758.3636.1 vs. uniprot
Match: A0A7S4QYQ6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QYQ6_9STRA)

HSP 1 Score: 195 bits (496), Expect = 8.740e-55
Identity = 94/175 (53.71%), Postives = 125/175 (71.43%), Query Frame = 0
Query:    5 KQIGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQEDLLPKATSTMRRLQLLPASSMADMDSLCRRAMTTLHWIVEPSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFLARRGS 179
            K +GSKGLE+KVDNPE+YNFRPKEMLR++C   + FS+   F    A SGYY  DL+ K+  T R+L LL   SM   +SL  +  T    + +  +A + + PDEFLDP++C  M+DPVLLPTSGT++DRSTI+QHLLND +DPFNR+PLT DM+ P TEL+E++E +L  + S
Sbjct:  699 KLVGSKGLELKVDNPENYNFRPKEMLRDLCAIFASFSSAHEFQVECAKSGYYNTDLMTKSVKTCRKLNLLTGESMELFESLAEKVKTASKHVGD-DDALVADAPDEFLDPLMCTFMKDPVLLPTSGTVIDRSTIMQHLLNDPVDPFNRKPLTVDMIIPATELKEKMENWLEEKRS 872          
BLAST of mRNA_Ecto-sp13_S_contig14758.3636.1 vs. uniprot
Match: A0A7S0CIR3_9STRA (Hypothetical protein n=3 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CIR3_9STRA)

HSP 1 Score: 172 bits (435), Expect = 3.230e-51
Identity = 89/179 (49.72%), Postives = 120/179 (67.04%), Query Frame = 0
Query:    5 KQIGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQEDLLPKATSTMRRLQLLPA--------SSMADMDSLCRR-AMTTLHWIVEPSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFL 174
            K +GSKGLE+KVDNPE+YNFRP+EMLR++C+  + F++ P F    A SGYY  DL+ K   T ++L LL +        S M   +SL    A+ +++  V+  EA   + PDEFLDP++C  M+DPVLLPTS  I+DRSTI QHLLND  DPFNR+ LT DMV P  EL+ R++ ++
Sbjct:    8 KLVGSKGLELKVDNPETYNFRPREMLRDLCSIFASFASAPEFQLECAKSGYYSADLMEKTIRTCKKLNLLDSATSTVLGMSQMELFESLPSHIALQSIN--VQDDEALTNDAPDEFLDPLMCTFMKDPVLLPTSDNIIDRSTITQHLLNDPHDPFNRKDLTIDMVVPAVELKNRMDAWM 184          
BLAST of mRNA_Ecto-sp13_S_contig14758.3636.1 vs. uniprot
Match: A0A7S2PEU3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PEU3_9STRA)

HSP 1 Score: 182 bits (462), Expect = 7.010e-50
Identity = 96/176 (54.55%), Postives = 122/176 (69.32%), Query Frame = 0
Query:    5 KQIGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQEDLLPKATSTMRRLQLLPASSMADMDSLCRRAMTTLHWIVEPS------EASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFL 174
            K IGSKGLE+KVDNPESYNFRPKEMLR++C   S FS    F    A SGY ++DL+ KA  T ++L LL  +SM +  SL        H++++ S      EA   + PDEFLDP++   MR+PVLLPTSGTI DRSTI+QHLLND  DPFNR+PLT + V+P TEL+E+I+ +L
Sbjct:  939 KLIGSKGLELKVDNPESYNFRPKEMLRDVCQIFSTFSCSREFQLECAKSGYVKDDLITKAVKTCQKLALLTGTSMENFASLP-------HYMIQASKDIADDEALTVDAPDEFLDPLMVTFMRNPVLLPTSGTICDRSTIMQHLLNDPTDPFNRKPLTMEEVQPATELKEKIDAWL 1107          
BLAST of mRNA_Ecto-sp13_S_contig14758.3636.1 vs. uniprot
Match: A0A835Z369_9STRA (Ubiquitin elongating factor core-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z369_9STRA)

HSP 1 Score: 181 bits (460), Expect = 8.150e-50
Identity = 89/171 (52.05%), Postives = 123/171 (71.93%), Query Frame = 0
Query:    7 IGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPG-FHKHLAMSGYYQEDLLPKATSTMRRLQLLPASSMADMDSLCRRAMTTLHWIVEPSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFLAR 176
            +G KGLEIKVDNPESYNFRPK+ML  +   ++ F+     F + +A  G+YQ  LLPKA +T+R+L LL   S+A +D LC  ++          +  LG+VP+EFLDP++C +M+DPV LPTSG I+DR+TI+QHLLND  DPFNR+PL+ DM++PQ EL+ RI+ +LA+
Sbjct:  694 VGKKGLEIKVDNPESYNFRPKDMLASVMAVVAHFADAGADFDRAVATCGFYQAQLLPKAAATVRKLGLLDMVSLAAVDKLCG-SVAAAAADANAMDEELGDVPEEFLDPLMCTIMQDPVGLPTSGQIVDRATIMQHLLNDETDPFNRKPLSVDMLQPQVELKARIDAYLAK 863          
BLAST of mRNA_Ecto-sp13_S_contig14758.3636.1 vs. uniprot
Match: A0A7S2A739_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A739_TRICV)

HSP 1 Score: 173 bits (439), Expect = 1.180e-47
Identity = 88/170 (51.76%), Postives = 115/170 (67.65%), Query Frame = 0
Query:    5 KQIGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQEDLLPKATSTMRRLQLLPASSMADMDSLCRRAMTTLHWIVEPSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFL 174
            K +GSKGLE+KVDNPESY+FRPK+MLR++C   + F++   F    A SGYY  DL+ K+  T R+L LL  ++  +  SL  R        VE  +A   + PDEFLDP++C  MRDPV LPTS +++DR+TI QHLLND  DPFNR+ LT DMV   TELRER+ ++L
Sbjct:  467 KLVGSKGLELKVDNPESYHFRPKDMLRDLCAVFANFASADEFVLECAKSGYYNADLVQKSVRTCRKLGLLTGTAAEEFASLTSRVEHAAR-SVEDFDALTADAPDEFLDPLVCTFMRDPVYLPTSDSVVDRTTIAQHLLNDPHDPFNRKDLTMDMVRDATELRERMGKWL 635          
BLAST of mRNA_Ecto-sp13_S_contig14758.3636.1 vs. uniprot
Match: A0A812RUJ8_SYMMI (PUB1 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RUJ8_SYMMI)

HSP 1 Score: 169 bits (429), Expect = 6.820e-47
Identity = 89/180 (49.44%), Postives = 121/180 (67.22%), Query Frame = 0
Query:    4 AKQIGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQED----LLPKATSTMRRLQLLPASSMADMDSLCRRAMTTLHWIVEPSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFLARRGS 179
            +K +G +GLEIKVDN ESYNF P+ +L+EIC T+S FS    F   +A  G+Y+ +     L KA +T+R+L LL ++ M  + SL   A        +  + +  E P+EFLDP++  +MRDPV LPTS  I+DRSTI QHLLND +DPFNR+PLT DM+EPQTEL+ RI E+L + G+
Sbjct:  346 SKIVGQRGLEIKVDNMESYNFNPRIILQEICVTMSHFSACEKFWVAVAGDGFYETNDGKVPLEKAVATVRKLNLLTSAQMTALSSLLENAAKARSSYKDIDDLT-NEAPEEFLDPLMATIMRDPVFLPTSANIVDRSTITQHLLNDEIDPFNRKPLTADMLEPQTELKSRIMEWLRQHGA 524          
BLAST of mRNA_Ecto-sp13_S_contig14758.3636.1 vs. uniprot
Match: A0A7R9Z2J3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z2J3_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.520e-46
Identity = 84/170 (49.41%), Postives = 114/170 (67.06%), Query Frame = 0
Query:    5 KQIGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQEDLLPKATSTMRRLQLLPASSMADMDSLCRRAMTTLHWIVEPSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFL 174
            K +G+KGLE+KVDNPESYNFRPK+MLR++C   + F++   F    A SGYY+ +L+ K+  T +RLQLL   +M +  +L  R        VE  +A   + P+EFLDP++   MRDPV LPTS  ++DR+TI QHLLND  DPFNR+ LT DMV+   EL+E I+ +L
Sbjct:  270 KLVGTKGLELKVDNPESYNFRPKDMLRDLCAIFANFASADEFVLECAKSGYYEAELVQKSVKTCQRLQLLTGEAMDEFAALTGRVEVASR-TVEDFDALTADAPEEFLDPLMYTFMRDPVYLPTSDKVVDRATITQHLLNDPHDPFNRKDLTMDMVKDAPELKESIDRWL 438          
BLAST of mRNA_Ecto-sp13_S_contig14758.3636.1 vs. uniprot
Match: A0A7S1GIE2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GIE2_CYCTE)

HSP 1 Score: 167 bits (423), Expect = 1.200e-45
Identity = 86/173 (49.71%), Postives = 114/173 (65.90%), Query Frame = 0
Query:    5 KQIGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQEDLLPKATSTMRRLQLLPASSM---ADMDSLCRRAMTTLHWIVEPSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFL 174
            K +GSKGLE+KV+NPE YNFRPKEMLR++C   + F+    F    A SGYY  DL+ K+  T R+  LL   SM   + +  L   A+      V   +A L + PDEFLDP++   M+DPVLLPTS TI+DR+TI QHLLND  DPFNR+ LT +M+ P TEL+E++ ++L
Sbjct:  406 KLVGSKGLELKVENPEEYNFRPKEMLRDLCAIFALFANSSDFQTECAKSGYYNLDLVSKSVKTCRKFNLLTGESMDAFSALPDLIEAAVKN----VASDDALLTDAPDEFLDPLMFTFMKDPVLLPTSETIIDRATITQHLLNDPHDPFNRKELTIEMIVPATELKEKMAKWL 574          
BLAST of mRNA_Ecto-sp13_S_contig14758.3636.1 vs. uniprot
Match: F0X1Z8_9STRA (Ubiquitin conjugation factor E4 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0X1Z8_9STRA)

HSP 1 Score: 168 bits (426), Expect = 4.860e-45
Identity = 79/171 (46.20%), Postives = 115/171 (67.25%), Query Frame = 0
Query:    5 KQIGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQEDLLPKATSTMRRLQLLPASSMADMDSLCRRAMTTLHWIVEPSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFLA 175
            K  G +GLE+KV+NPE Y FRPKEML+E+  T+  F+    F   +A++G+Y+E +  K ++ +RR QLLP   +A  D   R        +V+  EA LGE+PDEF+DP++C +M+DPV+LPTSG  +DR+TI QHLLND  DPF R PLT D + P  +L+ +++ ++A
Sbjct:  890 KLAGPRGLELKVNNPEQYRFRPKEMLKEVVETLLHFAEFTSFQGAVAVNGFYEEKIFSKCSNILRRTQLLPEQVIAKFDVFLRNVAQRASQLVK-DEAMLGEIPDEFMDPLVCTLMKDPVILPTSGYTMDRATITQHLLNDQSDPFTRAPLTIDQLVPNVQLKAQVDAWMA 1059          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14758.3636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU34_ECTSI8.080e-10293.75U-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S4QYQ6_9STRA8.740e-5553.71Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S0CIR3_9STRA3.230e-5149.72Hypothetical protein n=3 Tax=Proboscia inermis Tax... [more]
A0A7S2PEU3_9STRA7.010e-5054.55Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A835Z369_9STRA8.150e-5052.05Ubiquitin elongating factor core-domain-containing... [more]
A0A7S2A739_TRICV1.180e-4751.76Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A812RUJ8_SYMMI6.820e-4749.44PUB1 protein (Fragment) n=1 Tax=Symbiodinium micro... [more]
A0A7R9Z2J3_9STRA1.520e-4649.41Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S1GIE2_CYCTE1.200e-4549.71Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
F0X1Z8_9STRA4.860e-4546.20Ubiquitin conjugation factor E4 putative n=1 Tax=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003613U box domainSMARTSM00504Ubox_2coord: 110..173
e-value: 4.1E-18
score: 76.2
IPR003613U box domainPFAMPF04564U-boxcoord: 107..177
e-value: 1.9E-25
score: 88.8
IPR003613U box domainPROSITEPS51698U_BOXcoord: 106..180
score: 21.515
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 106..181
e-value: 4.2E-24
score: 86.4
IPR019474Ubiquitin conjugation factor E4, corePFAMPF10408Ufd2P_corecoord: 7..89
e-value: 2.4E-18
score: 66.1
NoneNo IPR availablePANTHERPTHR13931:SF2UBIQUITIN CONJUGATION FACTOR E4 Acoord: 6..178
NoneNo IPR availablePANTHERPTHR13931UBIQUITINATION FACTOR E4coord: 6..178
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 93..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14758contigEcto-sp13_S_contig14758:985..2471 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14758.3636.1mRNA_Ecto-sp13_S_contig14758.3636.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14758 985..2471 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14758.3636.1 ID=prot_Ecto-sp13_S_contig14758.3636.1|Name=mRNA_Ecto-sp13_S_contig14758.3636.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=183bp
FNCAKQIGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHL
AMSGYYQEDLLPKATSTMRRLQLLPASSMADMDSLCRRAMTTLHWIVEPS
EASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPF
NRQPLTEDMVEPQTELRERIEEFLARRGSQSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003613Ubox_domain
IPR013083Znf_RING/FYVE/PHD
IPR019474Ub_conjug_fac_E4_core