mRNA_Ecto-sp13_S_contig14757.3635.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14757.3635.1
Unique NamemRNA_Ecto-sp13_S_contig14757.3635.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14757.3635.1 vs. uniprot
Match: D7G3Q6_ECTSI (Glutamate dehydrogenase 2 (NADP-dependent) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3Q6_ECTSI)

HSP 1 Score: 420 bits (1080), Expect = 8.730e-144
Identity = 209/213 (98.12%), Postives = 212/213 (99.53%), Query Frame = 1
Query:    4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARVGRYIVASPSAKYNEPRSVFDAPADVAFLCRTSNELTEVEATALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPLKPGETI 642
            QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRG+GESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARVGRYIVASPSAKYNEP+SVFDAPADVAFLCRTSNELTEVEA ALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPL+PGETI
Sbjct:  272 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGRGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARVGRYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPLQPGETI 484          
BLAST of mRNA_Ecto-sp13_S_contig14757.3635.1 vs. uniprot
Match: D8LK56_ECTSI (Glutamate dehydrogenase 1 (NADP-dependent) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK56_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 6.740e-72
Identity = 113/213 (53.05%), Postives = 148/213 (69.48%), Query Frame = 1
Query:    4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARVGRYIVASPSAKYNEPRSVFDAPADVAFLCRTSNELTEVEATALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPLKPGETI 642
            QYKR++   +  GRG+LWGGA+P+PE  GYGVV FA   +  +G+SL GKRC++TGSGKVA+HVAEKLL+LGA P+TF+DSSGH++EPEG D  K + I KIK ERGARVGRYI+AS +A+Y EP ++FD P D+AF C   NE+ E  AT L  +GC  V++G   P + AA  V +K G+   P+  T+ G+ I  G  L  NP+   E I
Sbjct:  265 QYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFARCMLEDKGDSLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGHIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAQYTEPANIFDIPCDLAFACSHRNEVDETAATLLADTGCSAVIEGASAPCTKAAKAVFRKRGLLFAPHVATLAGSGIVSGLALATNPVGAKENI 477          
BLAST of mRNA_Ecto-sp13_S_contig14757.3635.1 vs. uniprot
Match: A0A6V1RCQ3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RCQ3_HETAK)

HSP 1 Score: 224 bits (571), Expect = 2.340e-67
Identity = 108/207 (52.17%), Postives = 139/207 (67.15%), Query Frame = 1
Query:    4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARVGRYIVASPSAKYNEPRSVFDAPADVAFLCRTSNELTEVEATALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPL 624
            QYKR     S +GRGLLWGGA P P C G+GV +FA++ +  +GESL GKRC++TGSGK A  VA KLLE GA P+TF+DSSGH++EP+G D  KFK++AKIK ERGAR+GRYI+AS +A+YNEP  +F  P D+ FLC   NE+    A  +   G   VV+G   P S  A +V KK G+   PYR T+ GA++  G  L  N +
Sbjct:  258 QYKRTHNHISHLGRGLLWGGAPPFPHCTGFGVAHFAQQMLEDKGESLKGKRCLITGSGKNAQAVARKLLEFGAVPLTFSDSSGHIYEPDGLDAVKFKQVAKIKAERGARIGRYIIASTTARYNEPEDLFGIPCDLVFLCGPMNEVGAAAAQQIADGGALGVVEGCNMPCSPEAIKVFKKRGLLFAPYRATLAGASLVNGTALAHNRI 464          
BLAST of mRNA_Ecto-sp13_S_contig14757.3635.1 vs. uniprot
Match: A0A4D9CY97_9STRA (Glutamate dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY97_9STRA)

HSP 1 Score: 222 bits (566), Expect = 1.130e-66
Identity = 106/205 (51.71%), Postives = 142/205 (69.27%), Query Frame = 1
Query:    4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARVGRYIVASPSAKYNEPRSVFDAPADVAFLCRTSNELTEVEATALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRN 618
            QYKRMS+  +  G+GLLWGG  P P+    GVV++A + + G+G+SL GKRC++TGSGK+ALHVAEKL+E+GA P+T +D+SGHV+EP+G D  K K I KIK ERGAR+GRYI+AS +AKYNEP +VF  PAD+ F C T NE+  V AT L   G + V +G + P +  A  + KK GI H  +  T+   +I  G EL ++
Sbjct:  253 QYKRMSIHHAQKGKGLLWGGVYPFPQATASGVVHWAARVLEGKGDSLEGKRCLITGSGKMALHVAEKLVEMGAVPLTLSDTSGHVYEPDGIDAAKLKTIMKIKSERGARIGRYIIASTTAKYNEPENVFSVPADLVFPCATHNEIDGVTATMLADMGVQGVFEGSHMPCTNQAISIFKKRGILHGGHVATLAADSIFNGLELSKS 457          
BLAST of mRNA_Ecto-sp13_S_contig14757.3635.1 vs. uniprot
Match: A0A836CHL3_9STRA (Glutamate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHL3_9STRA)

HSP 1 Score: 218 bits (555), Expect = 2.440e-65
Identity = 104/213 (48.83%), Postives = 144/213 (67.61%), Query Frame = 1
Query:    4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARVGRYIVASPSAKYNEPRSVFDAPADVAFLCRTSNELTEVEATALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPLKPGETI 642
            QYKR++   +  GRG+LWGG   +PE  G+GVVYFA + +R +G+SL GKRC+VTGSGK+AL +A KLLELGA P++F+DS+GH+ E +GFD  K + +  IK ERGAR+GRYI++S +A++N+P  +FD PADV F     NE+    A  L  +GC  V++G   P + AA  V +K G+   P+  T+ G  I  G EL  NPL PG++I
Sbjct:  222 QYKRVNDHVAQKGRGVLWGGIPLYPEGVGHGVVYFANEMLRDKGDSLKGKRCLVTGSGKLALSIAGKLLELGAIPISFSDSNGHIVETDGFDAAKLRTVVSIKNERGARLGRYIISSTTARFNDPECIFDVPADVVFAAAHRNEIDADRAQRLAENGCLAVIEGANSPCTKAAKAVFRKRGVLFGPHMATLAGNGIVSGFELSSNPLLPGQSI 434          
BLAST of mRNA_Ecto-sp13_S_contig14757.3635.1 vs. uniprot
Match: A0A7S2RRL7_9STRA (Glutamate dehydrogenase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRL7_9STRA)

HSP 1 Score: 202 bits (515), Expect = 1.220e-59
Identity = 97/213 (45.54%), Postives = 137/213 (64.32%), Query Frame = 1
Query:    4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARVGRYIVASPSAKYNEPRSVFDAPADVAFLCRTSNELTEVEATALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPLKPGETI 642
            QYKR+    +  G G LWGG VP     G+GV +FAE+ +R + E+L GKR ++TGSG +AL VAE+LL+ GA P+TF+DSSGH++E +G D  K   I  IK ERGAR+GRYIVAS +AKY++P  +F  P D+   C  S E+T+  A  L+A+GCK +V+GG  P +  A   L++NGI   PY+ T+   A++ G  L  + +   E +
Sbjct:  197 QYKRIKDIGAKQGSGFLWGGRVPWRFAYGHGVAHFAERMLRDKKETLQGKRVLITGSGNIALGVAERLLQFGAIPVTFSDSSGHIYEQDGIDASKLATIKHIKSERGARLGRYIVASTTAKYSDPEDIFSIPCDICIPCGPSQEVTDSVAQTLIANGCKAIVEGGSSPCTPDAIVTLRRNGILFAPYKATLSAGAVTSGGALQSSSITTAEDL 409          
BLAST of mRNA_Ecto-sp13_S_contig14757.3635.1 vs. uniprot
Match: F0Y860_AURAN (Uncharacterized protein GDH n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y860_AURAN)

HSP 1 Score: 200 bits (508), Expect = 1.430e-58
Identity = 99/198 (50.00%), Postives = 136/198 (68.69%), Query Frame = 1
Query:    4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARVGRYIVASPSAKYNEPRSVFDAPADVAFLCRTSNELTEVEATALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMI-GAAIS 594
            QYKR +   +  GRG+LWGGA+PHPE  GY  V+FA+  +  +GESL GKRC++TGSGKVAL VAE+LL LGA P+TF+D+SGH++EP+G    KF++I+ IK ERGARVGRYI+AS +AK+NEP  ++  P D+ F      E+    A  L  +GC  VVD GY P + +A    KK G+ + P++ ++  G AI+
Sbjct:  203 QYKRTTEHYARHGRGILWGGALPHPEVFGYSAVHFAKHLVESRGESLAGKRCLITGSGKVALAVAERLLALGAVPLTFSDTSGHIYEPDGIAATKFEQISTIKAERGARVGRYIIASTTAKFNEPEDIYSIPCDIVFPT-IRGEIDADVAARLADNGCAAVVDAGYAPSTPSAIRAYKKLGMAYGPFKASLAAGTAIA 399          
BLAST of mRNA_Ecto-sp13_S_contig14757.3635.1 vs. uniprot
Match: A0A7S3ZJ22_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJ22_9STRA)

HSP 1 Score: 200 bits (508), Expect = 3.660e-58
Identity = 102/198 (51.52%), Postives = 134/198 (67.68%), Query Frame = 1
Query:    4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARVGRYIVASPSAKYNEPRSVFDAPADVAFLCRTSNELTEVEATALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTM-IGAAIS 594
            QYKR + + S  G G+LWGG+VPHPE  GYG V FA+  +  +G+SL GKRC+VTGSGKVAL VA+KL+  GA P+T +D+SG ++E  G    K  +I+ IK ERGAR+GRYIVAS +AKYN+P  +FD P D+ F    SNE+    A  L  +GC T+VD GY P +  A   LKK G+ H P+R T+ IG A++
Sbjct:  246 QYKRTATNLSKHGFGMLWGGSVPHPEVHGYGPVSFAKSFLEARGDSLRGKRCLVTGSGKVALAVADKLVAEGAIPLTLSDTSGFIYEEGGLPSAKLAQISTIKAERGARIGRYIVASTTAKYNDPEDIFDVPCDLVFPTN-SNEIDAQAAEKLANNGCSTIVDAGYSPTTPEAIASLKKLGVAHCPFRATLAIGNALA 442          
BLAST of mRNA_Ecto-sp13_S_contig14757.3635.1 vs. uniprot
Match: A0A7S3PXE2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXE2_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.430e-56
Identity = 98/196 (50.00%), Postives = 134/196 (68.37%), Query Frame = 1
Query:    4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARVGRYIVASPSAKYNEPRSVFDAPADVAFLCRTSNELTEVEATALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAI 591
            Q+KR+S+ +S  GR  L   A   PE  G GVV+FA + M+ +G+SL GKRC++ G+GKVA  VA KLLE GA P+TF+DSSGHV+EP G D  K K I KIK ERGA +GRY++AS +A++N+P+++ D P D+ F C   N++TE  AT L  +GC  VV+GGY  V+     +LKK G+ + P+  TM G+AI
Sbjct:  267 QHKRISIKSSSGGRPFL---AASCPEAPGVGVVHFANEMMKDKGDSLQGKRCLIIGAGKVARSVAAKLLEFGAIPLTFSDSSGHVYEPNGIDQAKLKTIDKIKDERGALLGRYVIASTTAQFNDPQNILDVPCDLCFPCAAMNDITEEAATKLADNGCMAVVEGGYSTVTPEGRTILKKRGLAYGPHTLTMTGSAI 459          
BLAST of mRNA_Ecto-sp13_S_contig14757.3635.1 vs. uniprot
Match: A0A7S2U9C4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U9C4_9STRA)

HSP 1 Score: 190 bits (483), Expect = 3.300e-54
Identity = 99/211 (46.92%), Postives = 138/211 (65.40%), Query Frame = 1
Query:    4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARVGRYIVASPSAKYNEPRSVFDAPADVAFLCRTSNELTEVEATALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAIS---GGRELDRNPLK 627
            QYKR+S+ +S  GR  L  GA+  PE  GY V +FA + M+ + +SL GKRC++ GSGKVA  +AEKLLE GA P+TF+D SGH++EP+G D  K K I+ IK ERGA +GRYI+AS SA++NEP    D P D+ F C   N + E     L  +GC+ V++GG+  V+ A  ++LKK G+ + P+  TM G AI+   GG+ +D   L+
Sbjct:  283 QYKRISVKSSAGGRPFLMNGAM-QPEAPGYAVAHFANEMMKHKHDSLQGKRCMIIGSGKVARALAEKLLEYGAIPLTFSDGSGHIYEPDGIDSGKLKTISNIKSERGALLGRYIIASTSAQFNEPEDKMDIPCDLCFPCGAMNCVDEAAINKLADNGCQGVIEGGHCAVTVAGRKILKKRGLVYGPHTLTMTGDAIAHAIGGKHVDDKMLQ 492          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14757.3635.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3Q6_ECTSI8.730e-14498.12Glutamate dehydrogenase 2 (NADP-dependent) n=2 Tax... [more]
D8LK56_ECTSI6.740e-7253.05Glutamate dehydrogenase 1 (NADP-dependent) n=2 Tax... [more]
A0A6V1RCQ3_HETAK2.340e-6752.17Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9CY97_9STRA1.130e-6651.71Glutamate dehydrogenase n=2 Tax=Monodopsidaceae Ta... [more]
A0A836CHL3_9STRA2.440e-6548.83Glutamate dehydrogenase n=1 Tax=Tribonema minus Ta... [more]
A0A7S2RRL7_9STRA1.220e-5945.54Glutamate dehydrogenase n=2 Tax=Rhizochromulina ma... [more]
F0Y860_AURAN1.430e-5850.00Uncharacterized protein GDH n=1 Tax=Aureococcus an... [more]
A0A7S3ZJ22_9STRA3.660e-5851.52Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3PXE2_9STRA1.430e-5650.00Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2U9C4_9STRA3.300e-5446.92Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14757contigEcto-sp13_S_contig14757:2..3346 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score422.5
Seed ortholog evalue1.1e-115
Seed eggNOG ortholog2880.D7G3Q6
Model size642
KEGG rclassRC00006,RC02799
KEGG koko:K00262
KEGG ReactionR00248
KEGG Pathwayko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.glutamate dehydrogenase [NAD(P) ] activity
EggNOG OGsCOG0334@1,KOG2250@2759
EC1.4.1.4
Cds size642
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462787.36894-CDS-Ecto-sp13_S_contig14757:1..1151681462787.36894-CDS-Ecto-sp13_S_contig14757:1..115Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14757 2..115 -
1681462787.3794615-CDS-Ecto-sp13_S_contig14757:1069..12591681462787.3794615-CDS-Ecto-sp13_S_contig14757:1069..1259Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14757 1070..1259 -
1681462787.3875926-CDS-Ecto-sp13_S_contig14757:1955..20231681462787.3875926-CDS-Ecto-sp13_S_contig14757:1955..2023Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14757 1956..2023 -
1681462787.3984158-CDS-Ecto-sp13_S_contig14757:2442..25321681462787.3984158-CDS-Ecto-sp13_S_contig14757:2442..2532Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14757 2443..2532 -
1681462787.4138331-CDS-Ecto-sp13_S_contig14757:3166..33461681462787.4138331-CDS-Ecto-sp13_S_contig14757:3166..3346Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14757 3167..3346 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14757.3635.1prot_Ecto-sp13_S_contig14757.3635.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14757 2..3346 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14757.3635.1

>prot_Ecto-sp13_S_contig14757.3635.1 ID=prot_Ecto-sp13_S_contig14757.3635.1|Name=mRNA_Ecto-sp13_S_contig14757.3635.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=214bp
MQYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMG
KRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKI
AKIKQERGARVGRYIVASPSAKYNEPRSVFDAPADVAFLCRTSNELTEVE
ATALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGG
RELDRNPLKPGETI
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mRNA from alignment at Ecto-sp13_S_contig14757:2..3346-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14757.3635.1 ID=mRNA_Ecto-sp13_S_contig14757.3635.1|Name=mRNA_Ecto-sp13_S_contig14757.3635.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3345bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14757:2..3346- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCAGTACAAGCGCATGAGCCTTGACGCGTCTCCGATCGGAAGGGGCCT CCTGTGGGGCGGCGCTGTGCCCCACCCGGAGTGTGCGGGCTACGGCGTGG TTTACTTCGCGGAGAAGGCGATGCGAGGCCAGGGCGAGTCGCTCATGGGA AAGCGGTGCATCGTTACGGGAAGCGGCAAGGTGATCGATAGGTTCGGAGC GGCGTGGCACGCGCAACCAGCTAGTTTCGCTAGCGCACGTGCGTGTCTGG TCCCATTTATTCTCGAGCCCCATTCTATGCACAGTAATGGCTCATACGTT TGATACACCAGCAGGGTCACACAAGGGGAAATTAGTGCTCAGCACTTGTT TAAGGTGACGTTCATACGAGGTCCTGCGGGATGTTCCGTATTGATCTTTT GGGTCTCGAGTTTCCGGTTTCGTGTTTTCGGTAAGCATGTTAATGTTGTT GCCGATTAGCAGGATGTTTTCTGCAAATGCGGGTTCGGACTTGTGAATGA CGGCTCCGAGGTGTGAATGACGGCTCCGAGGGACCCGATGTGTCGTGTCT GGTGTGCCAGCCGAGTCTTGGTGCAGTGGACACAGCGCGTGTGTGTCCGC GCTGTTGCATGTCCTCTCTGCGGGTCGTCATGCGATGGGCTAACCCTTTT TACACGCTGAGCTGTGACGTGGCAAGCATTTGTTGGTGGTGTACATGCAC GCGACATGTGCTTCAATATTTCAATGCTCTGAGCTACTTTCATGCGCTGA GCCCTTGTGACGTACCTCTGTGTGACGTGCCGAAGACGTGATGGGTTTTC GTCGTGCAATCAAGGTGGCCCTGCATGTCGCGGAGAAACTTCTCGAGCTG GGTGCCACTCCGATGACGTTCACGGACAGCAGTGGACACGTCTTCGAGCC AGAGGTAAGACCTACCTATCGCTGCTGGCGATATTATTTCCGTGCAGTCG TATTGATTCTGTTGCTCATGATTCCTCGAAAGACGATGATACCTTTACGA TCGCCCTCTGCGCCCAAGTTTCAAGAGGAAACAATTTAAAATATAGCACA AGAGCATACCGACCAAGGCAACATAGCCACAGCAACGAAGACACCTTCGC GCCGAAAGCCTGCCGTACTTGTAGCCGTGACCACGAGTGGGTACTGGCCC TTCTGACTAGTCTAAGCGGTGAGTTTTGCTGAGACGTCACAGGAACAAAG AAAATGAACGGAACAACACCGCCAGCCGACGCGGCTCGGTTAGGCCCGTG TACGGACAACGTTGTTGTATGTCAAGCCACGGTAACAACCACACGCTGCT TCCTTTTGCTACCACCGCGTCAGGGTTTCGACGTCGAGAAGTTCAAGAAA ATCGCCAAGATTAAGCAGGAGAGAGGAGCACGAGTTGGAAGGTAAGGCCT CCACTCGATCATTGCCATTGTGATGGCTGCACACGGGACCCCAAGGGGGT TTGTTTGACGATCTAGAATGGGTGAACTTGGCACGGAACATATGGAAAGC CCGACGTGATCTGCATGCAATATCTCCTTGGAAGTGACGTCATAACCATT GTTGTTGGCTTGAGTTGAGGTAGCATTCCAATCACATGCTTTTTTTCAGC GCCATCCGGAATCCGATGATACTTGCGCCGCCCTCTTGGCCCGCGTTGAT CGTATTGCTGTTGACACCCGTCTTAACCGCGGGTGGCAGTGCACCCACAC GCCGACCCACGATCGATGTTGACTTCCAATCCAACCCCGAGATTTATCAA CCCCATGCCAGGATGAGCCCGGCACCGAAAATGAGCCACGTGTATTCCGG TATCGCTGCTCGCTAAAAAAAACTGGTATCAAACCTTCACAATGTGTACC CGTTCCACTACCTTGCGGTGGCGTTGATCGAGCCAGACTAGTATACTTTT TCGTGTTTTTCGTCCGACACTCTTGTCCAGAGTTGTCCCATGCCTATAAA TAGGTAGTTTTTCCTGAGGCACGCATTTGAAAAGGGAAATCATGCCCGCG CTGTTGGTGTCGCACCCACTAGCAGCAGCGACAGCGGCGTTTTGACTTGT CTTGTCTCGTCTTTTTTTTTTGTGCGCTTGCCGTCAGGTACATCGTCGCT TCCCCCTCAGCCAAGTACAACGAGCCGCGGTCGGTGTTTGACGCACCGGC AGACGTGGCATTCCTTTGCAGGACCTCCAACGAGCTTACCGAAGTGGAGG CAACTGCGCTGGTCGCGAGCGGCTGCAAGACCGTCGTTGACGGGGGGTAC CGGCCCGTGTCGACGGCTGCGGCTGAGGTGTGGACGTGTGCTACTGCTGC TGTTGCTGTGGTCGTTATTGTTGTTGGTGGTGGTTGGATGTGGTGGTGGT TCATGTTTGTCCTCCCTCTTGCATAAAAAATACTACTTGTAGCCTTAGCT TTTTTGTCTTTGTTGTTTCGTTGATGTCGATGTCTGCCCTCGTAGACACC TGTGTAAAGCTTTGCGATTCAGAAAAAAATTATCGCACGTATGCATGAGA TGGATTTAAGACGGAGATTTCACACTATCGAGAAAATGATCAGCTACCGC TTGGTTGAAACTGTTGGAAAGTGGTGGTCTCCCTGTCGGAACACGATGCC ACCTCACGCTGGCACGTATCCCCAGTGCAAGCCAGCCTTACACCTACTAT CCACGTTGCGCTGATCTCACATGACCCGGCTGTGTTCGGGTAGGGTTAGG GTTTATTCAGACCAGGGTTCAAATGGACTTATCTTGTCTTGCTGTGTCAA TTTTTTTGTTGGATAAGAGTCGAAAGGATGCCTGAGCATGGTGCTTCTAA ACAAGACAGAATGGGCGTTCACGCAACCAAGGACGCTTGGCAGCGCCGAA ACAATGGTGCTTGTTCGATGTATTGCGGTTTTGACAACAAAGTATTAAAC ACCAAAAACAACCCAGGGACAGCTCAGGTTTAGGCCGCTCCAAAGCGGTT GGGCTTGCTTGCTTTAGCTGTCCAGAGCGATTGCTGCCGCGAGATTGTCA AGAACCACACCTCCGTTCTAGGACACGCGTGAGAAATACCCAGAGACGCT CTTCGGCATCCTGGTCAATCAGCTCTTGTCTCGCCAAGATCGCATGGCCC TTTCAACCTAGTGTGCTCCCCTGCACAGATCCTCGACACTTCCTCGACGA AACCCTTAACTCTGGCCGCTGCTTGCTCTCCCCCTCCCCGACTTCATCGT CCCACTTCGTCCATCTTGGAACGGTTCTCAGGTTCTTAAGAAGAATGGGA TTTTCCACGTGCCATACCGCGGGACCATGATTGGCGCCGCCATCAGCGGC GGAAGGGAGTTAGACCGCAACCCTCTTAAGCCCGGAGAGACCATA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14757:2..3346-

>mRNA_Ecto-sp13_S_contig14757.3635.1 ID=mRNA_Ecto-sp13_S_contig14757.3635.1|Name=mRNA_Ecto-sp13_S_contig14757.3635.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=642bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14757:2..3346- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCAGTACAAGCGCATGAGCCTTGACGCGTCTCCGATCGGAAGGGGCCT
CCTGTGGGGCGGCGCTGTGCCCCACCCGGAGTGTGCGGGCTACGGCGTGG
TTTACTTCGCGGAGAAGGCGATGCGAGGCCAGGGCGAGTCGCTCATGGGA
AAGCGGTGCATCGTTACGGGAAGCGGCAAGGTGGCCCTGCATGTCGCGGA
GAAACTTCTCGAGCTGGGTGCCACTCCGATGACGTTCACGGACAGCAGTG
GACACGTCTTCGAGCCAGAGGGTTTCGACGTCGAGAAGTTCAAGAAAATC
GCCAAGATTAAGCAGGAGAGAGGAGCACGAGTTGGAAGGTACATCGTCGC
TTCCCCCTCAGCCAAGTACAACGAGCCGCGGTCGGTGTTTGACGCACCGG
CAGACGTGGCATTCCTTTGCAGGACCTCCAACGAGCTTACCGAAGTGGAG
GCAACTGCGCTGGTCGCGAGCGGCTGCAAGACCGTCGTTGACGGGGGGTA
CCGGCCCGTGTCGACGGCTGCGGCTGAGGTTCTTAAGAAGAATGGGATTT
TCCACGTGCCATACCGCGGGACCATGATTGGCGCCGCCATCAGCGGCGGA
AGGGAGTTAGACCGCAACCCTCTTAAGCCCGGAGAGACCATA
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