mRNA_Ecto-sp13_S_contig14732.3617.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14732.3617.1
Unique NamemRNA_Ecto-sp13_S_contig14732.3617.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14732.3617.1 vs. uniprot
Match: D7FSY5_ECTSI (Threonine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSY5_ECTSI)

HSP 1 Score: 602 bits (1553), Expect = 2.710e-215
Identity = 285/288 (98.96%), Postives = 286/288 (99.31%), Query Frame = 1
Query:    1 RSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLEKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRHLPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDRRVWVGGEVFKVTRR 864
            RSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHL+KGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYR LPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDRRVWVGG VFKVTRR
Sbjct:  183 RSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLDKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRELPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDRRVWVGGVVFKVTRR 470          
BLAST of mRNA_Ecto-sp13_S_contig14732.3617.1 vs. uniprot
Match: A0A6H5JBI8_9PHAE (Threonine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBI8_9PHAE)

HSP 1 Score: 580 bits (1494), Expect = 6.130e-203
Identity = 273/277 (98.56%), Postives = 275/277 (99.28%), Query Frame = 1
Query:    1 RSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLEKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRHLPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDRRVW 831
            R RIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHV+TTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLE GYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRHLPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDRRV+
Sbjct:  182 RRRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVDTTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLENGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRHLPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDRRVY 458          
BLAST of mRNA_Ecto-sp13_S_contig14732.3617.1 vs. uniprot
Match: A0A7S0D919_9EUKA (Threonine--tRNA ligase n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D919_9EUKA)

HSP 1 Score: 500 bits (1288), Expect = 2.120e-173
Identity = 228/273 (83.52%), Postives = 250/273 (91.58%), Query Frame = 1
Query:    1 RSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLEKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRHLPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFD 819
            + RIEA+ EP+KLEILD+IKTEPIT+YH+GD+WWDLCAGPHVETTG LP+  IELQT+AGAYWRGDE R  LQRIYGTAWEN +QLK +K  + EAKRRDHRVLG KLDLFS+QEDAGGGLVFWHPKGSTIR LIE+FWK  H++ GYELLYTPHVANLDLWKTSGHFDFY++GMFDQMDVEGD YQIKPMNCPFHCLVYKD LRSYR LPIRWAE+GTVYRYERSGTLHGLMRVRGFTQDDAHIFCLP QLEDE++ VLDLTE+ILSRFGFD
Sbjct:   68 KRRIEAINEPYKLEILDAIKTEPITIYHIGDEWWDLCAGPHVETTGKLPKNAIELQTIAGAYWRGDEKREMLQRIYGTAWENKSQLKAYKDLLAEAKRRDHRVLGTKLDLFSIQEDAGGGLVFWHPKGSTIRKLIEDFWKDLHIQNGYELLYTPHVANLDLWKTSGHFDFYQEGMFDQMDVEGDMYQIKPMNCPFHCLVYKDKLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPNQLEDELVGVLDLTESILSRFGFD 340          
BLAST of mRNA_Ecto-sp13_S_contig14732.3617.1 vs. uniprot
Match: A0A7R9WD93_9STRA (Threonine--tRNA ligase (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WD93_9STRA)

HSP 1 Score: 485 bits (1248), Expect = 1.680e-171
Identity = 215/274 (78.47%), Postives = 252/274 (91.97%), Query Frame = 1
Query:    1 RSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLEKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRHLPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDR 822
            + RIE +GEPFKLEILDSIKTEPIT+YH+GD+WWDLCAGPHVE+TG LP+KGI+LQ++AGAYWRGDENR  LQRIY TAW +  QLK++K+ M EAK+RDHR+LGKKLDLFS+QEDAGGGLVFWHPKGS +R  IE+FWK+ H + GY+L+Y+PH+ANLDLWKTSGH DFY+DGMF  MDV+ ++YQIKPMNCPFHCL+YKD+LRSYR LPIRWAE+GTVYRYERSGTLHGLMRVRGFTQDDAHIFCLP+QLEDEI++VLDLTE+ILSRFGFD+
Sbjct:   25 KKRIEEIGEPFKLEILDSIKTEPITIYHIGDEWWDLCAGPHVESTGKLPKKGIQLQSVAGAYWRGDENREMLQRIYATAWRDAGQLKKYKKMMEEAKKRDHRMLGKKLDLFSIQEDAGGGLVFWHPKGSVVRREIEDFWKSSHTDTGYDLVYSPHIANLDLWKTSGHNDFYRDGMFKSMDVDNEEYQIKPMNCPFHCLMYKDELRSYRDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPDQLEDEIVAVLDLTESILSRFGFDK 298          
BLAST of mRNA_Ecto-sp13_S_contig14732.3617.1 vs. uniprot
Match: A0A835ZFX3_9STRA (Threonine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFX3_9STRA)

HSP 1 Score: 498 bits (1281), Expect = 5.860e-171
Identity = 226/272 (83.09%), Postives = 253/272 (93.01%), Query Frame = 1
Query:    1 RSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLEKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRHLPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGF 816
            R RIEA+GE FKLEILDSIKTEPIT+YH+G++WWDLCAGPHVETTGDLP K I+LQ +AGAYWRGDE R  LQRIYGTAWE+P QLKEHKR M EAKRRDHRVLGKKLDL+SLQE+AGGGLVFWHPKG+ IR LIE++WK+ HLE+GYELLYTPHVANL+LWKTSGHFDFY++GMFDQMDVEG+Q+QIKPMNCPFHCLVYKD +RSYR LPIRWAE+GTVYRYERSGTLHGLMRVRGFTQDDAH+FCLP+QLE EII++LDL E +LSRFGF
Sbjct:  177 RRRIEAIGEKFKLEILDSIKTEPITIYHIGEEWWDLCAGPHVETTGDLPPKAIQLQNVAGAYWRGDEKREMLQRIYGTAWESPEQLKEHKRLMEEAKRRDHRVLGKKLDLYSLQEEAGGGLVFWHPKGAIIRRLIEDYWKSVHLEEGYELLYTPHVANLNLWKTSGHFDFYREGMFDQMDVEGEQFQIKPMNCPFHCLVYKDAMRSYRDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHVFCLPDQLETEIIAILDLFERVLSRFGF 448          
BLAST of mRNA_Ecto-sp13_S_contig14732.3617.1 vs. uniprot
Match: A0A7S3YRZ8_9EUKA (Threonine--tRNA ligase (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YRZ8_9EUKA)

HSP 1 Score: 489 bits (1259), Expect = 1.040e-169
Identity = 222/272 (81.62%), Postives = 247/272 (90.81%), Query Frame = 1
Query:    1 RSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLEKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRHLPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGF 816
            + RIEA+ EPFKLEILDSIKTEPIT+YH+GD+WWDLCAGPHVE+TG LP+  IELQ++AGAYWRGDE R  L RIYGTAWE+  QLK +K  + EAKRRDHRVLG+KLDLFS+QEDAGGGLVFWHPKG+T+R LIE+FWK  H++ GYE LYTPHVANLDLWKTSGHFDFYK+GMFDQMDVEGD+YQIKPMNCPFHCLVYKD LRSYR LPIRWAE+GTVYRYERSGTLHGLMRVRGFTQDD HIFCLP QLEDEI+ VLDLTE++LSRFGF
Sbjct:   88 KRRIEAINEPFKLEILDSIKTEPITIYHIGDEWWDLCAGPHVESTGKLPRNAIELQSIAGAYWRGDEKREMLSRIYGTAWESKDQLKRYKDLVAEAKRRDHRVLGQKLDLFSIQEDAGGGLVFWHPKGATMRRLIEDFWKDLHVKTGYEFLYTPHVANLDLWKTSGHFDFYKEGMFDQMDVEGDEYQIKPMNCPFHCLVYKDKLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDGHIFCLPSQLEDEIVGVLDLTESVLSRFGF 359          
BLAST of mRNA_Ecto-sp13_S_contig14732.3617.1 vs. uniprot
Match: A0A7S2V1W5_9STRA (Threonine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1W5_9STRA)

HSP 1 Score: 493 bits (1270), Expect = 1.910e-169
Identity = 226/274 (82.48%), Postives = 248/274 (90.51%), Query Frame = 1
Query:    1 RSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLEKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRHLPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDR 822
            + RIEALGEPFKLEILDSIKTEPITLYHVG++WWDLCAGPHVE+TG LP K I+L ++AGAYWRGDE R  LQRIYGTAWE+P QLK +K  +VEAK+RDHRVLGKKLDLFSLQE+AGGGLVFWHP+GS IR +IE+FWK  H   GYELLYTPHVANLDLWKTSGHFDFY+DGMFDQMDVEGD+YQI+PMNCPFHCLVYKD LRSYR LPIRWAE+GTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEI+ V DL E ILS+FGF +
Sbjct:  166 KKRIEALGEPFKLEILDSIKTEPITLYHVGEEWWDLCAGPHVESTGKLPPKAIQLDSVAGAYWRGDEKREVLQRIYGTAWEDPPQLKAYKSMLVEAKKRDHRVLGKKLDLFSLQEEAGGGLVFWHPRGSLIRRMIEDFWKNAHEGGGYELLYTPHVANLDLWKTSGHFDFYRDGMFDQMDVEGDEYQIRPMNCPFHCLVYKDSLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIVGVCDLVETILSKFGFSK 439          
BLAST of mRNA_Ecto-sp13_S_contig14732.3617.1 vs. uniprot
Match: A0A7S2SSP0_9STRA (Threonine--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSP0_9STRA)

HSP 1 Score: 491 bits (1264), Expect = 1.130e-168
Identity = 222/273 (81.32%), Postives = 251/273 (91.94%), Query Frame = 1
Query:    1 RSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLEKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRHLPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFD 819
            R+RIEAL EPFKLEILDSI+TEPIT+YH+GD+WWDLCAGPHVE TG+LP KGI+LQ++AGAYWRGDE+R  L RIYGTAWE+ AQL ++K  + EAK+RDHRVLGKKLDLFS+Q++AGGGLVFWHPKGST+R +IE+FWK  HL  GYELLYTPHVANL+LWKTSGHFDFY++GMFDQMDVEGD+YQIKPMNCPFHCLVYKD LRSYR LPIRWAE+GTVYRYERSGTLHGLMRVRGFTQDDAHIFCLP QL DEI+ VLDLTE ILS+FGF+
Sbjct:  148 RTRIEALNEPFKLEILDSIETEPITIYHIGDEWWDLCAGPHVEHTGELPPKGIQLQSMAGAYWRGDESRDMLTRIYGTAWEDAAQLSQYKAMLEEAKKRDHRVLGKKLDLFSIQDEAGGGLVFWHPKGSTVRRVIEDFWKDTHLASGYELLYTPHVANLELWKTSGHFDFYREGMFDQMDVEGDEYQIKPMNCPFHCLVYKDSLRSYRDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPNQLSDEIVGVLDLTEQILSKFGFN 420          
BLAST of mRNA_Ecto-sp13_S_contig14732.3617.1 vs. uniprot
Match: B5Y5F7_PHATC (Threonine--tRNA ligase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y5F7_PHATC)

HSP 1 Score: 487 bits (1253), Expect = 1.250e-166
Identity = 215/274 (78.47%), Postives = 252/274 (91.97%), Query Frame = 1
Query:    1 RSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLEKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRHLPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDR 822
            R RIE +GEPFKLEILDSIKTEPITLYH+GD+WWDLCAGPHV++TG LP+K I+LQ++AGAYWRGDENR  LQRIY TAW++P QLK++K+ + EAK+RDHR+LGKKLDLFS+QEDAGGGLVFWHPKGS +R +IE+FWK  H++ GY+++Y+PH+AN+DLWKTSGHFDFY+  MFDQMDVE +QYQIKPMNCPFHCL+YKD+LRSYR LP RWAE+GTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQL+DEI+ VLDLTE ILSRFGFD+
Sbjct:  172 RRRIEKIGEPFKLEILDSIKTEPITLYHIGDEWWDLCAGPHVDSTGKLPKKAIQLQSVAGAYWRGDENREMLQRIYATAWKDPQQLKQYKKMLEEAKKRDHRMLGKKLDLFSIQEDAGGGLVFWHPKGSKVRRMIEDFWKDAHIQDGYDVVYSPHIANIDLWKTSGHFDFYRADMFDQMDVENEQYQIKPMNCPFHCLMYKDELRSYRDLPFRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLQDEIVGVLDLTETILSRFGFDK 445          
BLAST of mRNA_Ecto-sp13_S_contig14732.3617.1 vs. uniprot
Match: A0A7S1VGN3_9STRA (Threonine--tRNA ligase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VGN3_9STRA)

HSP 1 Score: 487 bits (1254), Expect = 1.680e-166
Identity = 214/274 (78.10%), Postives = 256/274 (93.43%), Query Frame = 1
Query:    1 RSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLEKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRHLPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDR 822
            RSRIEALGEPFKLEILDSIKTEPIT+YH+G++WWDLCAGPHVE+TG +P+K ++LQ++AGAYWRGDE R  LQRIY TAW++P QLK++K+ + EAK+RDHR+LG+KL+LFS+QEDAGGGLVFWHPKGST+R ++E+FWK +HL+ GY+L+YTPH+AN+DLWKTSGHFDFYK+ MFDQM VE DQYQIKPMNCPFHCL+YKD+LRSYR LPIRWAE+GTVYRYERSGTLHGLMRVRGFTQDDAHI+CLP QL++EI++VLDLTE ILSRFGFD+
Sbjct:  192 RSRIEALGEPFKLEILDSIKTEPITIYHIGEEWWDLCAGPHVESTGKIPKKALQLQSVAGAYWRGDEKREMLQRIYATAWKDPDQLKQYKKLLQEAKKRDHRMLGQKLNLFSIQEDAGGGLVFWHPKGSTVRRIVEDFWKQKHLDGGYDLVYTPHIANIDLWKTSGHFDFYKEDMFDQMQVENDQYQIKPMNCPFHCLMYKDELRSYRDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIYCLPSQLQEEIVAVLDLTEGILSRFGFDQ 465          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14732.3617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSY5_ECTSI2.710e-21598.96Threonine--tRNA ligase n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JBI8_9PHAE6.130e-20398.56Threonine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP... [more]
A0A7S0D919_9EUKA2.120e-17383.52Threonine--tRNA ligase n=2 Tax=Amorphochlora amoeb... [more]
A0A7R9WD93_9STRA1.680e-17178.47Threonine--tRNA ligase (Fragment) n=1 Tax=Pseudict... [more]
A0A835ZFX3_9STRA5.860e-17183.09Threonine--tRNA ligase n=1 Tax=Tribonema minus Tax... [more]
A0A7S3YRZ8_9EUKA1.040e-16981.62Threonine--tRNA ligase (Fragment) n=1 Tax=Lotharel... [more]
A0A7S2V1W5_9STRA1.910e-16982.48Threonine--tRNA ligase n=1 Tax=Fibrocapsa japonica... [more]
A0A7S2SSP0_9STRA1.130e-16881.32Threonine--tRNA ligase n=1 Tax=Rhizochromulina mar... [more]
B5Y5F7_PHATC1.250e-16678.47Threonine--tRNA ligase n=1 Tax=Phaeodactylum trico... [more]
A0A7S1VGN3_9STRA1.680e-16678.10Threonine--tRNA ligase n=1 Tax=Grammatophora ocean... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14732contigEcto-sp13_S_contig14732:3..3792 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size864
Hectar predicted targeting categoryother localisation
Exons6
Cds size606
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14732.3617.1prot_Ecto-sp13_S_contig14732.3617.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14732 809..3770 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462786.2289407-UTR-Ecto-sp13_S_contig14732:2..1381681462786.2289407-UTR-Ecto-sp13_S_contig14732:2..138Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14732 3..138 +
1681462786.2397263-UTR-Ecto-sp13_S_contig14732:708..8081681462786.2397263-UTR-Ecto-sp13_S_contig14732:708..808Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14732 709..808 +
1681462786.3013086-UTR-Ecto-sp13_S_contig14732:3770..37921681462786.3013086-UTR-Ecto-sp13_S_contig14732:3770..3792Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14732 3771..3792 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462786.2493486-CDS-Ecto-sp13_S_contig14732:808..8331681462786.2493486-CDS-Ecto-sp13_S_contig14732:808..833Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14732 809..833 +
1681462786.2661726-CDS-Ecto-sp13_S_contig14732:1618..17201681462786.2661726-CDS-Ecto-sp13_S_contig14732:1618..1720Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14732 1619..1720 +
1681462786.2753901-CDS-Ecto-sp13_S_contig14732:1954..20311681462786.2753901-CDS-Ecto-sp13_S_contig14732:1954..2031Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14732 1955..2031 +
1681462786.2832012-CDS-Ecto-sp13_S_contig14732:2492..26771681462786.2832012-CDS-Ecto-sp13_S_contig14732:2492..2677Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14732 2493..2677 +
1681462786.2914772-CDS-Ecto-sp13_S_contig14732:3553..37701681462786.2914772-CDS-Ecto-sp13_S_contig14732:3553..3770Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14732 3554..3770 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14732.3617.1

>prot_Ecto-sp13_S_contig14732.3617.1 ID=prot_Ecto-sp13_S_contig14732.3617.1|Name=mRNA_Ecto-sp13_S_contig14732.3617.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=202bp
MGKPCPAQGTQAAYGGGQAARSPRSGQEARPIFPTGRRRRWPGVLASKGV
DYPNADRELLEGAAPRKGLRAALHSARSQPRPVEDFRALRLLQGRNVRPD
GCGGRPVPDQAHELPLPLPCVQGRPSLLQASSDPLGRDGHGVPLRTKRHS
PRADASARLHPGRRPHLLPTGAARGRDHLRARPDRGDPEPLWFRQASVGW
G*
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mRNA from alignment at Ecto-sp13_S_contig14732:3..3792+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14732.3617.1 ID=mRNA_Ecto-sp13_S_contig14732.3617.1|Name=mRNA_Ecto-sp13_S_contig14732.3617.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3790bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14732:3..3792+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGAAGTCGCATTGAGGCCTTGGGGGAACCCTTCAAGCTCGAGATTCTGGA CTCGATCAAGACAGAGCCCATCACGCTTTACCACGTGGGAGACCAGTGGT GGGATCTGTGCGCCGGCCCCCACGTTGAAACTACTGGTGAGCCTTTGCCC TCATCCTTAGCCATGACGGCGGCGTCGTGTCATGTTGCGGGCGTACCCAC TTTACTACCTAGAACATTGGTCTTGGAATCCCGGACCACGAAGAGCAATC TGGCTCGGCCATCCTGTTGAAGACGGTCGACGTACCATGCCGTGGGCAGC TCTTGAGCTACTGATCGCTCATCTGTCCCTTTGATGGGCCCATCCACCTC CAGCAAGCCGTTGTGAGCGTTTTGATGCCTATGCGACTCTGGTAGTCTAC CCAGTGCGAGTGCCGTAAAGGTGCCGGCGAACGGACAGGTGTGCGATCCG GTCTTTTTGTTGAAGGCTCAATTGCTCCACAGCCGACACGGAAAGAGGGG CTCTCGACGAGACCTTTCGAAAACAACCTTCCCTGGTTTGTTGCAGAAAA CGAGCTGTACTGCTGTAACATTCGGTTGCCCATCTGTCCGTTCGCCAGCA CCTTTGCGGCATGCGTAGGGTAGCTGCCTATCCGACCTCGCCCGACACGC CGTAATCAACAACACGACGACGATAATGACAATGACGACAAAACGTTGTG TGCCAGGCGACCTTCCCCAGAAGGGCATCGAGCTGCAGACGTTGGCCGGC GCCTACTGGCGCGGAGATGAGAACAGGCCGGCGCTACAGCGTATCTACGG TACCGCATGGGAAAACCCTGCCCAGCTCAAGGTATCTAGACATAGCTAGC TGCAAAAGCAAGTCCCAAGAGGTGGTTTCGTTGTTGCGGTTCGTCGTTTC GTTTCGAATTGGGCAGTCGTTTCGCGTGTGGGTGTGCTGATGATCGATGA CTTCTTTTCATCGATGATTAGGTCGGCTCCACTAAACAGTGTCGCCACCA GAGTTGTGTTTGACGCCCTGCACACTAAAGCCTGTTGTACAGTCCCAAAA TGCATCCTTAGGGTACACGGGACTCTTGGCGTGTTGGGTCCCACTCACCT CCCGGATTAATGAGTTACTCCTCTGGTAGTGATCGTTGTTGGACAGTGGC AGTATGGTGTGGTAGTTGACGCTAGCGTTGTCTTGGCCAGACATGAGGCC TCGTCTGTTGGTTATGTACGATGTGGTGGTGTTACATCACTCTTCACAAG CTCCTTTGTTCCACCTTGGCTCAATGGCCCGCCCGAGGGAGAGTGTCGGT GTAGGGGGCATGTCGGTCAAAAGAACACGCGTTCGACGTCGTGTTTGCTT TGTTTTTTCTTGGGGGGCTTGGGCGTCGGAAGCTGGACACCGTGGTACCC TCCGCACTCACGCTGAAGTGTAGCACGAGCGAGCTGGCGCGGCCAGCTGC TCCATGATGTCGCACGTCCGATCACATCCCAAACTCCACTCGACAAGAGG AACACCCGCCCCCCTCCTTCCCTCCCTCGCGCTGCCTGCTGCGTACCCTA CCCTGCCCTCCCGGGCTCGGGCCGATGCCGTATGTTGTCGTGGGGTCGAT GACGTCGGTGAAACAGGAACACAAGCGGCGTATGGTGGAGGCCAAGCGGC GAGATCACCGCGTTCTGGGCAAGAAGCTCGACCTATTTTCCCTACAGGAA GACGCCGGCGGTGGCCTGGTAAGATCAACAAACTCAAGCCGGTTTGCTCG ATCTTATATAATCTACCTCAGTTTTGTGGTCGGCGCTGTACCTGGCGGCA TGAGTGTGCGATTCTTCTCTCGCAGATCTCGTAGATCTCGTAGATGGGTC GTGAGCACTTGGATTGGTGTGGGCATAAAACAGGTCTGCTTCCTTCGCAA CAACGCGCGAGCTTGTCGATTTACTTATTTACTGCTGTCGCTTGTATTTC AGGTGTTCTGGCATCCAAAGGGGTCGACTATCCGAATGCTGATCGAGAAC TTCTGGAAGGCGCAGCACCTCGAAAAGGGGTGAGCGAGCGAGGAACAACG CGCTAGCAGGAGACTCAGATTTTGTTCCGACTTTGCTTTCAGGACGTAGA CTTTGGTACTTGACCACTTGACTACATTACCCCCTTGTCGGGGGGGGGGG GGGGGACACAGACTAGAAGTTTTTGTGCATGTACCACGGGTGGATCCCCT CTCTCCAACTTTGAAGGCCATCCCCTGTTTTTCTTGTGCTATCGTCACGA TGATGGTTGTGATTGTTGTTGCGGTCGATTCACCTCTGCTGTGTTTGTTT ATCTTGCGAAAAGAGGAGCTGCCGAAGGTGTCAGCGTCAGCGGTTCCACC TTTGCATCCATTCGATATGGGCATGACATCGACATCATCGACGTGCACCA CCACCACCGCACACTTACCGTGTAGGCCTCGCCCGCACGGACTAATCCTT CGGTACCTCTCTCTCTCTCTCTCTCTCTGTATTTTCTTAGTTACGAGCTG CTCTACACTCCGCACGTAGCCAACCTCGACCTGTGGAAGACTTCCGGGCA CTTCGACTTCTACAAGGACGGAATGTTCGACCAGATGGATGTGGAGGGAG ACCAGTACCAGATCAAGCCCATGAACTGCCCCTTCCACTGCCTTGTGTAC AAGGACGACCTTCGCTCTTACAGGCGTGTATCCTTGACCTTAGCGTACTT GCCACCTTGCTTTCTAGGTCTCGAAAGTTGTCGTTGTTGCTGTTACTGTT GCTGTTTGTGGTGTGGTACATGCAGGACGTGCTTTAGACTTTGGTAAGGA TGCGAGAGAATGCACGGGGCTGCGATCGATTTGTTAATGATGTCGTTCTT GACTTTTATCGCACCCCTTTCGTCGCGCCCCCGTGCGATGTCACCGGTGC CCGTGCGATAATCGAAATATATTTACTTGGTTCTTGGTTTTGCATCGCAC CGGGGTGCGATATCACTCTTACGTGCGTCACTGAGTAAACAATACACCCT TCAAAGCAGCTACCGCGGGTGCTTTCGACGCAAAAGCGTGAAGTGATGAA TGACAGTCTCCTCTCACTCCTGTTTTTTTGTCGTGTTTTCGAGGTGTTCC GAGATGTGGTTACGCGATGCCACCATACGATTCCGGAAGTACCTCCTGCG CATCGAGTGCCCCGGAGCCAATCGCGTCTCGGTATCGGTGATATCGATCA CCGAACCCCGTGCGATAATCGAAATATATTACGTGGTTCTTTGTTTTGCA TCGCACGGGGGTGCGATATCACCAGTATGTGCGATATCACAGAGCCGTGC GTTCTCTCGCGTCCTTACGGCACCCGATACCTGGTGTGACTCTCCCCGAT AGAGTCTTCCCATCCGCGATGTACCCCCATGACCCTCCGTGACAAACATA GATCTAAACAAGTCGATGGACAATCATGACACTCACCTCGCAAACAGAGA CACCACGCAAACGGAGATCTATGTTATCGATCCGATGGGCAATCATGACC CTCCCTGACCAACTGATATTTCCCATCCGCCAACCCCCTCCCATGACAGA GATCTTCCGATCCGTTGGGCCGAGATGGGCACGGTGTACCGTTACGAACG AAGCGGCACTCTCCACGGGCTGATGCGAGTGCGAGGCTTCACCCAGGACG ACGCCCACATCTTCTGCCTACCGGAGCAGCTAGAGGACGAGATCATCTCC GTGCTCGACCTGACAGAGGCGATCCTGAGCCGCTTTGGTTTCGACAGGCG AGTGTGGGTTGGGGGTGAGGTGTTCAAGGTGACCAGGCGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14732:3..3792+

>mRNA_Ecto-sp13_S_contig14732.3617.1 ID=mRNA_Ecto-sp13_S_contig14732.3617.1|Name=mRNA_Ecto-sp13_S_contig14732.3617.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=606bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14732:3..3792+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGAAAACCCTGCCCAGCTCAAGGAACACAAGCGGCGTATGGTGGAGG
CCAAGCGGCGAGATCACCGCGTTCTGGGCAAGAAGCTCGACCTATTTTCC
CTACAGGAAGACGCCGGCGGTGGCCTGGTGTTCTGGCATCCAAAGGGGTC
GACTATCCGAATGCTGATCGAGAACTTCTGGAAGGCGCAGCACCTCGAAA
AGGGTTACGAGCTGCTCTACACTCCGCACGTAGCCAACCTCGACCTGTGG
AAGACTTCCGGGCACTTCGACTTCTACAAGGACGGAATGTTCGACCAGAT
GGATGTGGAGGGAGACCAGTACCAGATCAAGCCCATGAACTGCCCCTTCC
ACTGCCTTGTGTACAAGGACGACCTTCGCTCTTACAGGCATCTTCCGATC
CGTTGGGCCGAGATGGGCACGGTGTACCGTTACGAACGAAGCGGCACTCT
CCACGGGCTGATGCGAGTGCGAGGCTTCACCCAGGACGACGCCCACATCT
TCTGCCTACCGGAGCAGCTAGAGGACGAGATCATCTCCGTGCTCGACCTG
ACAGAGGCGATCCTGAGCCGCTTTGGTTTCGACAGGCGAGTGTGGGTTGG
GGGTGA
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