mRNA_Ecto-sp13_S_contig1473.3616.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1473.3616.1 vs. uniprot
Match: D8LIV2_ECTSI (Queuosine salvage protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIV2_ECTSI) HSP 1 Score: 424 bits (1091), Expect = 1.490e-147 Identity = 216/222 (97.30%), Postives = 220/222 (99.10%), Query Frame = 1
Query: 1 MAAMADPQGTLGGEGGLLARVVATTATACEEQQVAWINDDAVAKFLDGGGVPLDKYKRAASRVPLPLKFDDAAQEINFHSLLALLSFGGAHEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVREDAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSDPGVEGLVRSLSGALPGFQDTETVN 666
MAAMAD QGTLGG+GGLLARVVAT+ATACEEQQVA INDDA+AKFLDGGGVPLDKYKRAASRVPLPLKFDDAAQEINFHSLLALLSFGG+HEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVREDAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSDPGVEGLVRSLSGALPGFQDTETVN
Sbjct: 1 MAAMADQQGTLGGKGGLLARVVATSATACEEQQVARINDDAMAKFLDGGGVPLDKYKRAASRVPLPLKFDDAAQEINFHSLLALLSFGGSHEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVREDAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSDPGVEGLVRSLSGALPGFQDTETVN 222
BLAST of mRNA_Ecto-sp13_S_contig1473.3616.1 vs. uniprot
Match: A0A835Z942_9STRA (Queuosine salvage protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z942_9STRA) HSP 1 Score: 140 bits (352), Expect = 2.110e-36 Identity = 85/203 (41.87%), Postives = 118/203 (58.13%), Query Frame = 1
Query: 49 LLARVVATTATACEEQQVAWINDDAVAKFLDGGGVPLDKYKRAASRVPLPLKFDDAAQEINFHSLLALLSFGGAHEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVRE-DAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSDPG-VEGLVRSLSGALPGFQD 651
LL+R+ +TA A E Q I K L+ V +KR + VP PL F +INFH+ LA+L FGG++EP+L+ T + ++D +FGLIG+H+SR R DA +M++A +S F IP+RE + S+IPGV V+RPG L L L+ G LLS GY D AQF+L + ++ G E LV +L ALP D
Sbjct: 11 LLSRIRQSTAQAYEAQNRVVI----YTKALNDLVVDAKAFKRYTTPVPYPLSFGTPGDQINFHTGLAMLRFGGSYEPDLVARTRNTLEDTIRFGLIGAHISRSRFDAAFMRDASPNDISSTFNIPMREAEQVSSIPGVMVERPGPLAPLVADLQEALHAVGARLLSLGYQDAAQFVLDALKAGGGSAERLVSALVQALPSAFD 209
BLAST of mRNA_Ecto-sp13_S_contig1473.3616.1 vs. uniprot
Match: A0A433CWU1_9FUNG (Queuosine salvage protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433CWU1_9FUNG) HSP 1 Score: 108 bits (270), Expect = 1.540e-24 Identity = 64/167 (38.32%), Postives = 92/167 (55.09%), Query Frame = 1
Query: 181 SRVPLPLKFDDAAQEINFHSLLALLSFGGAHEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPV-REDAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSD----PGVEGLVRSLSGALPGFQDTETVN 666
S V +PLKFD QEINF + + LL+FG + L TG D +FG + H+ A+ + V V++ F+IP+ RE P +P +T+ P L A+A+ SVLNETG+ LL+ GY +M+QFIL + + + P GLV A PGF+D V+
Sbjct: 38 STVRMPLKFDTTQQEINFIAFVDLLNFGSGYRVPLHEATGRGAFDTVRFGAMSHHIGGLPWTASHFHSTTVFEVAQTFQIPLDREVHPEGMPFLTMSEPHELRKLAEAITSVLNETGQVLLNGGYANMSQFILQATKPEQGRPPSAVGLVEKFVRAFPGFRDMAKVD 204
BLAST of mRNA_Ecto-sp13_S_contig1473.3616.1 vs. uniprot
Match: A0A2D4BR61_PYTIN (Queuosine salvage protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR61_PYTIN) HSP 1 Score: 97.4 bits (241), Expect = 2.130e-20 Identity = 70/207 (33.82%), Postives = 103/207 (49.76%), Query Frame = 1
Query: 49 LLARVVATTATACEEQQ-VAWINDDAVAKFLDGGGVPLDKYKRAASRVPLPLKFDDAAQEINFHSLLALLSFGGAHEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPV-REDAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARS----DPGVEGLVRSLSGALPGFQD 651
LLARV ++ A V IN+D + FLD + +Y+ ++ PL F E+NF +LLALLSFG + EL + T + FGLIG ++S RLDA +M + +++ F +P+ R++ ST G+ V +PG L A+ + L E RG++D+ F+L RS P LV SL P F D
Sbjct: 11 LLARVRSSCAAQLRHNDCVVAINNDKIRAFLDE--LDWSQYEELSAPQRFPLNFRSLQDEVNFMTLLALLSFGSGYRKELHKYTQRGASETILFGLIGMYISVPRLDADYMAXVSIDVLADFFSLPLDRDEEIST--GIYVSKPGPLRPLAEMMHKKLKE-------RGFSDLGAFVLAHLRSTESSSPSAAHLVESLVETFPAFDD 206
BLAST of mRNA_Ecto-sp13_S_contig1473.3616.1 vs. uniprot
Match: W7U497_9STRA (Queuosine salvage protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U497_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 2.400e-20 Identity = 65/192 (33.85%), Postives = 97/192 (50.52%), Query Frame = 1
Query: 82 ACEEQQVAWINDDAVAKFLDGGGVPLDKYKRAASRVPLPLKFDDAAQEINFHSLLALLSFGGAHEPELLRLTG---SNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVREDAP-STIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSD--PGVEGLVRSLSGALP 639
A E + ++ +AV + L + + +RV LPLKF E+NFH++L+LLSFG A+E + + +G + D FGLIG HLS+ L A ++ V+ F I E+ P ++P + V+RPG L L + +N G L G D+A FIL + R + P V LV +L A P
Sbjct: 26 ASERTSIVRVDHEAVGRLA--AQFSLSEIRDKVARVGLPLKFPRPLDELNFHAMLSLLSFGKAYEGDFISQSGLLRESARDTVLFGLIGLHLSKTDLRAGFLMTVTRSDVASYFGIEPMENVPHDSMPAIRVERPGPLSRLVDELVTSMNTVGARLKELGEPDLAHFILAAMRGEEVPTVARLVTALDAAFP 215
BLAST of mRNA_Ecto-sp13_S_contig1473.3616.1 vs. uniprot
Match: A0A7S3DF13_9EUKA (Queuosine salvage protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DF13_9EUKA) HSP 1 Score: 94.7 bits (234), Expect = 2.220e-19 Identity = 54/181 (29.83%), Postives = 91/181 (50.28%), Query Frame = 1
Query: 109 INDDAVAKFLDGGGVPLDKYKRAASRVPLPLKFDDAAQEINFHSLLALLSFGGAHEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVREDAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSDPGVEGLVRSLSGALPGFQD 651
+N++ V F V L + + A +PLPL+F E+NF + L L++FG + L G + +G+IG H+S ERLDA +++ + + F+I R ++ +++PG+T + PG L A+ + VLN+ G L +G A + +D G+V+ L P F D
Sbjct: 24 VNEEKVKDFA--ANVVLKELENGARPIPLPLRFPSWEDEVNFWTCLNLINFGSGYRHLLKESHGKGAYETMLYGMIGLHISGERLDAERLQSINALDIESCFRIKYRVESATSVPGLTKEGPGPLYDLAKRIQKVLNDAGRILWEKGQKSFATLLFGD--NDFTAAGVVKKLVETFPAFDD 200
BLAST of mRNA_Ecto-sp13_S_contig1473.3616.1 vs. uniprot
Match: A0A7S1XYU2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYU2_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 3.450e-16 Identity = 47/133 (35.34%), Postives = 73/133 (54.89%), Query Frame = 1
Query: 193 LPLKFDDAAQEINFHSLLALLSFGGA-------HEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVREDAP--STIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMA 564
+PL FD A QE NFH++ A + G+ + L R TG++V D FGLIG HLSR +DA ++ ++ +P++ P S + G+ V+RPG L + + ++LN TG A ++GY D+A
Sbjct: 1 MPLHFDTARQEANFHAVAAGVLGSGSVGLRWFGADRRLYRATGNDVADTVMFGLIGMHLSRVEVDAEKLEEIKPFDLATYLNVPIQVSVPISSEMDGIYVERPGPLAPLVEDMAALLNHTGRAASAQGYGDVA 133
BLAST of mRNA_Ecto-sp13_S_contig1473.3616.1 vs. uniprot
Match: A0A0C3AX27_9AGAM (Queuosine salvage protein n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AX27_9AGAM) HSP 1 Score: 79.7 bits (195), Expect = 8.710e-14 Identity = 55/175 (31.43%), Postives = 89/175 (50.86%), Query Frame = 1
Query: 187 VPLPLKFDDAAQEINFHSLLALLSFGGAHEPELLRLTGSNVDDAAKFGLIGSHLS----RERLDATWMKNAHVGSVSEGFKIPVR---EDAPSTIPGVTVDRPGA-LVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSDPGVEG-------LVRSLSGALPGFQDTETVN 666
V +PL+F A EIN S+L++L+F ++ L + TG D + + G +LS + L A +KN G V+E ++ E A TIPG+T+ + G L + +VLNETG L++RGY ++ +F+LH+ + EG ++ + A P F+D N
Sbjct: 63 VAMPLQFPTVASEINVISVLSILNFAHSYRVPLKKATGRGAYDTMRALIFGLYLSSNDEEDLLSAKGLKNLTSGRVAELMQLSGHLHIEQAHPTIPGLTIGQLGGPLYELVTEVTNVLNETGAILVTRGYPNLGEFVLHALKMGQTSEGGPVDPEVVLDEVIRAFPAFRDVGVYN 237
BLAST of mRNA_Ecto-sp13_S_contig1473.3616.1 vs. uniprot
Match: A9V7W4_MONBE (Queuosine salvage protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V7W4_MONBE) HSP 1 Score: 67.0 bits (162), Expect = 1.770e-9 Identity = 48/147 (32.65%), Postives = 79/147 (53.74%), Query Frame = 1
Query: 100 VAWINDDAVAKFLDGGGVPLDKYKRAASRVPLPLKFDDAAQEINFHSLLALLSFGGAHEPELLRL-TGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVREDAPST--IPGVTVDRPGALVSHAQALCSVLNETGE 531
V + D AV K ++ V + R + +PL+FD A QE NFH+L+A LS LL+ TG + + FG++G ++S ++L + + + +VSE F++P+R++A +T +P V P L AQ L VL+E +
Sbjct: 10 VVAVEDGAVGKVVEQL-VKKRELLRPEAPSGMPLRFDSAEQEANFHALMAALSACAMGYDALLQAHTGRGLRELVLFGVMGLYISGQQLTTSALAELTLENVSELFQLPLRDEAGATTVMPAVQSVPPHPLAPLAQRLLEVLHELAD 155
BLAST of mRNA_Ecto-sp13_S_contig1473.3616.1 vs. uniprot
Match: I2CQ69_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ69_NANGC) HSP 1 Score: 63.2 bits (152), Expect = 2.750e-9 Identity = 37/102 (36.27%), Postives = 56/102 (54.90%), Query Frame = 1
Query: 82 ACEEQQVAWINDDAVAKFLDGGGVPLDKYKRAASRVPLPLKFDDAAQEINFHSLLALLSFGGAHEPELLRLTG---SNVDDAAKFGLIGSHLSRERLDATWM 378
A E + ++ +AV + L + + +RV LPLKF E+NFH+LL+LLSFG A+E + + +G + D FGLIG HLS+ L A ++
Sbjct: 26 ASERTSIVRVDHEAVGRLA--AQFSLSEIRDKVARVGLPLKFPRPLDELNFHALLSLLSFGRAYEGDFISQSGLLRESARDTVLFGLIGLHLSKTDLRAGFL 125 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1473.3616.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1473.3616.1 >prot_Ecto-sp13_S_contig1473.3616.1 ID=prot_Ecto-sp13_S_contig1473.3616.1|Name=mRNA_Ecto-sp13_S_contig1473.3616.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=222bp MAAMADPQGTLGGEGGLLARVVATTATACEEQQVAWINDDAVAKFLDGGGback to top mRNA from alignment at Ecto-sp13_S_contig1473:13624..16829+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1473.3616.1 ID=mRNA_Ecto-sp13_S_contig1473.3616.1|Name=mRNA_Ecto-sp13_S_contig1473.3616.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3206bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1473:13624..16829+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1473:13624..16829+ >mRNA_Ecto-sp13_S_contig1473.3616.1 ID=mRNA_Ecto-sp13_S_contig1473.3616.1|Name=mRNA_Ecto-sp13_S_contig1473.3616.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=666bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1473:13624..16829+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |