mRNA_Ecto-sp13_S_contig1472.3611.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig1472.3611.1
Unique Name	mRNA_Ecto-sp13_S_contig1472.3611.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1472.3611.1 vs. uniprot
Match: A0A6H5JLA9_9PHAE (HeH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLA9_9PHAE)

HSP 1 Score: 1053 bits (2724), Expect = 0.000e+0
Identity = 861/971 (88.67%), Postives = 870/971 (89.60%), Query Frame = 3

Query:  255 MASHGARRRRSAPRAATSAAAAIGLCLATVTTTHTSLAFHLHTGTRGIASSSVGGCDGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAMLLGNSQVSGAATAAAQAPGTADQNRLIADLERRLTGVSSGPAAAAAASTADAPGDXXXXXXXSPAGSVEAPTAAATVDSTPRFPSMFATPSSXXXXXXXXXXXXXXKQTSTPASKPSIKMKEYKFTVKLPEFDVPTVGPITVPEEGNVFAGVEPRAIFKPPSRERVPPQPDFPAAGAIRAALQSAGKGDGVKELTDAFAAAVPRQGDYNRAVVEFEERVSELVKTTDNPTFAPGVPLAPEFASMLSKAKETAFNGIRPYLPKGAEPELALFMLVTLPVLTVALRSADENSRRPKQDPLPPVSRPPRITRYPNSPAKVDAEAVAEARKERQAQAXXXXXXXXXEELAARGLAAVQVPEGAPAVEAAA-VESLHGGVAAAVAEKPDAITAELARLREELAAAGKLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKLSDAFPARESLAAEAASPVKKSXXXXXXXXXXXXXXXXXXXXXXXXAAAAKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAADPLAVESPEPTMLHNGASVMMEGTETVVGAAAAAAA---EEAVTPNEYEDMSEDLSRAVLGVQGYDMDGLDLEMADLRPEDLEELLAMEMGGLDMASRDEEDFGPEDDESMSQGLRMAAESALAHTSGGGAGRRIRTASPVGATSLRSAAGGAVAAVAESRGGAPQATAVRDGEEVGFSSVPGTTEDDELAAFRRLEAEAVADFGTGAAGWGGQQAXXXXXXXXXXXXXXXXXXXXXXS-QDDGDWGALSAKAVGRKTVAALKEFLDEEGMDYPSKIKKAELVDMVLNMLAEG 3152
            MASHGARRRRSAPRAAT+AAAAIGLCLATVTTTHTSLAFHLHTGTRGIASSSVGGCD    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       SAMLLGN QVSGAATA AQAPGTADQNRLIADLERRLT VSSGPAAAAA STADA G XXXXXXX      EAPTAAATVDS PR PSMFA    XXXXXXXXXXXX  KQTSTPA KPSIKMKEYKFTVKLPE DVPTVGPITVPEEGNVFAGVEP AIFK PSRERV P PDFPAAGAIR ALQSAGKGDGVKELTDAFAAAVPRQGDYNRAV+EFEERVSELVKTT NPTFAPGVPLAPEF SMLSKAKETAFNGIRPYLPKGAEPELALFMLVTLPVLTVALRSADENSRRPKQDPLPPVSRPPRITRYPNSPAKVDAEAVAEA KERQAQA         EELA RGLAAVQV EGAPAVEAAA VE  HGGVAAAVAEKPDAITAELARLREELAA      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKLS+AFPARESLAAEAAS     XXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        VESPEPTMLHNGASVMMEGTETVVG          E+AVTPNEYEDMSE+LSRAVLGVQGYDMDGLDLEMADLRPEDLEELLA+EMGGLDMASRDEEDFGPEDDESMSQGLRMAAESALAHTSGGGAGRRIRTASPVGATSLRSAAGGA AAVAESRGGAPQATAVRDGE VG SSVPG+TEDDELAAFRRLEAEAV DFGT AAGWGG   XXXXXXXXXXXXXXXXXXXXX + QDDGDWGALSAKAVGRKTVAALKEFLDEEG+DYPSKIKKAELVDMVLNMLAEG
Sbjct:    1 MASHGARRRRSAPRAATTAAAAIGLCLATVTTTHTSLAFHLHTGTRGIASSSVGGCDDAMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSAALLSAMLLGNPQVSGAATATAQAPGTADQNRLIADLERRLTSVSSGPAAAAA-STADALGXXXXXXXXXXXXXTEAPTAAATVDSNPRVPSMFAP---XXXXXXXXXXXXAAKQTSTPAPKPSIKMKEYKFTVKLPELDVPTVGPITVPEEGNVFAGVEPWAIFKAPSRERVLPHPDFPAAGAIRGALQSAGKGDGVKELTDAFAAAVPRQGDYNRAVMEFEERVSELVKTTHNPTFAPGVPLAPEFTSMLSKAKETAFNGIRPYLPKGAEPELALFMLVTLPVLTVALRSADENSRRPKQDPLPPVSRPPRITRYPNSPAKVDAEAVAEALKERQAQADVEAVAKLREELAVRGLAAVQVQEGAPAVEAAAAVEGSHGGVAAAVAEKPDAITAELARLREELAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKLSNAFPARESLAAEAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---VESPEPTMLHNGASVMMEGTETVVGXXXXXXXXXXEDAVTPNEYEDMSENLSRAVLGVQGYDMDGLDLEMADLRPEDLEELLALEMGGLDMASRDEEDFGPEDDESMSQGLRMAAESALAHTSGGGAGRRIRTASPVGATSLRSAAGGAAAAVAESRGGAPQATAVRDGEGVGLSSVPGSTEDDELAAFRRLEAEAVGDFGTAAAGWGGXXXXXXXXXXXXXXXXXXXXXXXXGAPQDDGDWGALSAKAVGRKTVAALKEFLDEEGIDYPSKIKKAELVDMVLNMLAEG 964

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BLAST of mRNA_Ecto-sp13_S_contig1472.3611.1 vs. uniprot
Match: D7FLN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN9_ECTSI)

HSP 1 Score: 629 bits (1621), Expect = 4.060e-204
Identity = 497/620 (80.16%), Postives = 506/620 (81.61%), Query Frame = 3

Query: 1335 MLSKAKETAFNGIRPYLPKGAEPELALFMLVTLPVLTVALRSADENSRRPKQDPLPPVSRPPRITRYPNSPAKVDAEAVAEARKERQAQAXXXXXXXXXEELAARGLAAVQVPEGAPAVEAAA---VESLHGGVAAAVAEKPDAITAELARLREELAAAGKLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKLSDAFPARESLAAEAASPVKKSXXXXXXXXXXXXXXXXXXXXXXXXAAAAKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAADPLAVESPEPTMLHNGASVMMEGTETVVGAAAAAAAEE---------AVTPNEYEDMSEDLSRAVLGVQGYDMDGLDLEMADLRPEDLEELLAMEMGGLDMASRDEEDFGPEDDESMSQGLRMAAESALAHTSGGGAGRRIRTASPVGATSLRSAAGGAVAAVAESRGGAPQATAVRDGEEVGFSSVPGTTED-DELAAFRRLEAEAVADFGTGAAGWGGQQAXXXXXXXXXXXXXXXXXXXXXXS-QDDGDWGALSAKAVGRKTVAALKEFLDEEGMDYPSKIKKAELVDMVLNMLAEG 3152
            MLSKAKE AFNGIRPYLPKGAE ELALFMLVTLPVLTVALRSADENSRRPK DPLPPV+RPPRITRYPNSPAKVDAEAVAEARKERQAQAXXXXX    EELA RGLAAV V +GAPAVEAAA   V  LHGGVAAAVA KPDAITAELARLREELAAAGKL  XXXXXXXXXXXXXXXXXXXXXXXXX                  XXXXX                   EKLSDAFPARESLAAEAAS     XXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXX XXXXXXXXXX       AVESPEPTMLHNGASVMMEGTET VGA                 AVTPNEYEDMSEDLSRAVLGVQGYDMDGLDLEM DLRPEDLEELLA+EMGGLDMA+RDEEDFGPEDDESMSQGLRMAAESALAHTSGGGAGRRIRTASPVGATSLRS  G A AAVAESRGGAPQATAVR+GE VGFSSVPGT E+ DELAAFRRLEAEAVADFGTGAAGWGGQQ+          XXXXXXXXXX  + QDDGDWGALSAKAVGRKTVAALKEFLDEEGMDYPSKIKKAELVDMVLNMLA+G
Sbjct:    1 MLSKAKENAFNGIRPYLPKGAETELALFMLVTLPVLTVALRSADENSRRPKPDPLPPVARPPRITRYPNSPAKVDAEAVAEARKERQAQAXXXXXAKLREELAVRGLAAVTVADGAPAVEAAAGAVVGGLHGGVAAAVAAKPDAITAELARLREELAAAGKLXXXXXXXXXXXXXXXXXXXXXXXXXXXEEIRLRSEKEAMRAAAQRXXXXXREAAYAGVQEKATKLSAAREKLSDAFPARESLAAEAASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXX------XAVESPEPTMLHNGASVMMEGTETAVGAXXXXXXXXXXXXXXXXAAVTPNEYEDMSEDLSRAVLGVQGYDMDGLDLEMTDLRPEDLEELLALEMGGLDMAARDEEDFGPEDDESMSQGLRMAAESALAHTSGGGAGRRIRTASPVGATSLRSG-GSAAAAVAESRGGAPQATAVREGEGVGFSSVPGTIEEEDELAAFRRLEAEAVADFGTGAAGWGGQQSVGVGRQPAPAXXXXXXXXXXGGAPQDDGDWGALSAKAVGRKTVAALKEFLDEEGMDYPSKIKKAELVDMVLNMLAKG 613

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1472.3611.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1472.3611.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JLA9_9PHAE	0.000e+0	88.67	HeH domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D7FLN9_ECTSI	4.060e-204	80.16	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1472	contig	Ecto-sp13_S_contig1472:81..9035 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	5231
Hectar predicted targeting category	chloroplast
Exons	4
Ec32 ortholog description	hypothetical protein
Ec32 ortholog	Ec-17_000410.1
Cds size	2901

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1472.3611.1	prot_Ecto-sp13_S_contig1472.3611.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig1472 335..6959 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462785.6086833-UTR-Ecto-sp13_S_contig1472:80..334	1681462785.6086833-UTR-Ecto-sp13_S_contig1472:80..334	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig1472 81..334 +
1681462785.6726897-UTR-Ecto-sp13_S_contig1472:6959..9035	1681462785.6726897-UTR-Ecto-sp13_S_contig1472:6959..9035	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig1472 6960..9035 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462785.6245487-CDS-Ecto-sp13_S_contig1472:334..1314	1681462785.6245487-CDS-Ecto-sp13_S_contig1472:334..1314	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1472 335..1314 +
1681462785.6374028-CDS-Ecto-sp13_S_contig1472:3348..4044	1681462785.6374028-CDS-Ecto-sp13_S_contig1472:3348..4044	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1472 3349..4044 +
1681462785.647574-CDS-Ecto-sp13_S_contig1472:5001..5596	1681462785.647574-CDS-Ecto-sp13_S_contig1472:5001..5596	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1472 5002..5596 +
1681462785.6575632-CDS-Ecto-sp13_S_contig1472:6329..6959	1681462785.6575632-CDS-Ecto-sp13_S_contig1472:6329..6959	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1472 6330..6959 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig1472:81..9035+
coding sequence from alignment at Ecto-sp13_S_contig1472:81..9035+

protein sequence of mRNA_Ecto-sp13_S_contig1472.3611.1

>prot_Ecto-sp13_S_contig1472.3611.1 ID=prot_Ecto-sp13_S_contig1472.3611.1|Name=mRNA_Ecto-sp13_S_contig1472.3611.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=967bp
MASHGARRRRSAPRAATSAAAAIGLCLATVTTTHTSLAFHLHTGTRGIAS
SSVGGCDGTTTTAGRRRSATAVAACRGSSSSSPPPPDERPQRHDTDSNSK
GGGGAAKEFSAALLSAMLLGNSQVSGAATAAAQAPGTADQNRLIADLERR
LTGVSSGPAAAAAASTADAPGDAAATAPASPAGSVEAPTAAATVDSTPRF
PSMFATPSSSTTQQAAPAAAAAAKQTSTPASKPSIKMKEYKFTVKLPEFD
VPTVGPITVPEEGNVFAGVEPRAIFKPPSRERVPPQPDFPAAGAIRAALQ
SAGKGDGVKELTDAFAAAVPRQGDYNRAVVEFEERVSELVKTTDNPTFAP
GVPLAPEFASMLSKAKETAFNGIRPYLPKGAEPELALFMLVTLPVLTVAL
RSADENSRRPKQDPLPPVSRPPRITRYPNSPAKVDAEAVAEARKERQAQA
DVEAVAKLREELAARGLAAVQVPEGAPAVEAAAVESLHGGVAAAVAEKPD
AITAELARLREELAAAGKLAAKVEALERANARLMGQVADLSRTPSIEEVR
LRAEKEAMRAAAQREREEAREAAYAGVQEKATKLSAAREKLSDAFPARES
LAAEAASPVKKSPAASAKKPAAAKKPAAKKPAAKKPAAAAKKKKTPAETN
KKAEAAPAKKAKAPGRKKAAAAAPAAADPLAVESPEPTMLHNGASVMMEG
TETVVGAAAAAAAEEAVTPNEYEDMSEDLSRAVLGVQGYDMDGLDLEMAD
LRPEDLEELLAMEMGGLDMASRDEEDFGPEDDESMSQGLRMAAESALAHT
SGGGAGRRIRTASPVGATSLRSAAGGAVAAVAESRGGAPQATAVRDGEEV
GFSSVPGTTEDDELAAFRRLEAEAVADFGTGAAGWGGQQAPGGGRPPAPA
AGGGGGGGRGGASQDDGDWGALSAKAVGRKTVAALKEFLDEEGMDYPSKI
KKAELVDMVLNMLAEG*

mRNA from alignment at Ecto-sp13_S_contig1472:81..9035+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig1472.3611.1 ID=mRNA_Ecto-sp13_S_contig1472.3611.1|Name=mRNA_Ecto-sp13_S_contig1472.3611.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8955bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1472:81..9035+ (Ectocarpus species13 EcNAP12_S_4_19m)
CGCGCGGTATTTCGTTCTCTCTGCGTCGGAAACACGCCCGCCAGCGGCAT
CCACCCCCACCAAGCCGCTCTACGAGGTGTACAGCTGTCCACTTGCTGCA
GACACCACCATCGAACTCCGTTTTTTGTTCTTGAACCAACGCAAGGCTTT
AGTCACCTGCCCCAAAAGGGTGTGTAAGTGGACGGCTTGACTTCGCGAAA
CAAGGGTGGGTGCAACACGTTGCACCTGTCCTTGGAGGGACTCCGCTACC
CTTCATGGCGAGTCATGGTGCGCGTCGGCGGCGCAGTGCGCCGAGAGCAG
CAACGTCAGCGGCCGCGGCGATAGGGCTGTGCCTCGCCACCGTGACGACC
ACACACACGTCTCTCGCTTTCCACCTGCATACCGGCACGCGCGGGATCGC
CAGCAGCAGCGTGGGTGGATGCGACGGTACTACGACTACGGCGGGGCGGC
GAAGGTCTGCCACCGCTGTTGCCGCGTGTCGAGGGTCATCATCATCCTCA
CCACCACCGCCGGATGAACGACCACAACGTCATGATACCGACAGCAACAG
CAAGGGCGGTGGGGGAGCGGCGAAGGAGTTCTCGGCGGCGCTGCTGTCGG
CCATGCTCCTTGGCAACTCGCAAGTCTCGGGTGCAGCAACAGCCGCGGCG
CAGGCACCGGGCACCGCTGACCAAAACCGCCTGATCGCCGACCTGGAGCG
CAGGCTCACGGGCGTCTCGAGTGGTCCTGCTGCAGCTGCTGCTGCTTCCA
CTGCTGACGCACCCGGCGATGCGGCAGCAACCGCGCCTGCTTCTCCCGCT
GGGAGCGTAGAAGCCCCGACCGCTGCTGCTACCGTCGACTCCACTCCCCG
GTTTCCATCAATGTTTGCAACCCCCTCGTCATCGACGACCCAACAGGCGG
CACCCGCAGCAGCAGCAGCAGCAAAGCAGACCTCTACTCCCGCGTCCAAG
CCCTCCATAAAGATGAAGGAGTACAAGTTCACGGTTAAGCTGCCGGAGTT
TGACGTCCCCACAGTGGGTCCCATCACGGTGCCGGAGGAGGGTAACGTGT
TCGCTGGGGTGGAGCCGCGGGCCATTTTCAAACCTCCGAGCAGGGAGAGG
GTGCCGCCCCAGCCCGACTTCCCCGCAGCGGGCGCGATCAGGGCTGCGCT
GCAGAGCGCGGGCAAGGGGGACGGCGTGAAGGAGCTGACGGATGCGTTTG
CGGCTGCTGTACCCAGGCAGGGTGACTACAACCGGTGAGCTGTTTGAGCT
GCTGCTGCTGCTGCTGCTGCTGCTGGTGCTGTGTCTTGTCAAGTGGAATT
CTCATGTATTACAAGAGGTGTGAGATGGGGAGCAGCACATGATGATGTCA
TGTTGTCCTCGTCTATTCGGAACGTTAGCGACAGCATCACAGTACAATGA
TGCTTTTGTGCCTACCGGCACGCTTCAATGCACTGAGGGAGATAGCGTGG
ACACGCGTGGTGCTGGGCCGGAACGTCGTGCGGACCAATCTATTACATGT
TTCGAAGAGCTTGTTGTAGCTGTAGAACGGTCTAGAAGGGCGAGACAGAT
GACACATGCATCAGGCGCAATCCTGGGGCCGTGACATGTGACATGTGACT
GGTGCGAAAAACAAAAAAAAACGGCTGCTGGTTGCCTTGAACTGCAACTA
CGCCAGCTGTTGTTGTCTCAAGGAGAAATAAATGTCTTCCAACTCCCCCC
GCCCCAAACAAATTAAATGAAAGAACAAACACAACTCAAATTTGACTTCT
CCGGTGTATGCACACGTGAAGTGTCATCTTTCGGAAGGTACACAAGTCCA
ACAGCAGCCAGCCGTCGATTACACCTCAACCGACCTGGTGTCTGTATCGC
CTTGAACAGCAGTATCCAAAGGTGCAAAAACTTCCGCGCAAAGTTTCAGA
GGTGTTTGAGTAACAGGGTATCTATTCACGACGCGATCTTGAAACTCCGT
CGGGTGCTGCTGTAGAGTGGAACAACGGTACATAAGGAAGCCCGGTATGG
CAGGATCTTCCGTGCACTGCTGTGCTGCTTTGCGACGTGGACTGTTTCAT
CCCTTGAGGGATGTGGGTGTGATTCGGTTCTGGGAAAGGTTGTTGTAACA
CTCCTCTCGAAGTCCTTCGAAGCTTCGAAGTATAGGTACGCAGGTCAGAT
GGTCCAACAGCTGAGTATGTGCCGTCTCGCGCCTCAGGTTCAAGAAGGGC
CAGTCGCGCTTGTGATTGCCTCTCTTCATAGCTCTCTTTTGACAAAACGA
CTTTTCCCCAACTCGACAGAGAGGAATGTATGGTTGGTGATGTATGACCT
CAAAATATCTCCGTGCGAAGAGACTCATATTTTGGAGTGTGCGTGGAACG
TGTTTGTCCTTCCCTGCCAGCATTTGTCTCTGGAAGAAGTGGCTGAAGCG
AGAGGGCCAAGAAATAACAATATTGCCAATGGGAGTGATCAACTGCTTTA
TACGGTGTTTCAACCTTGTAGACATGAGCCCTACCCTGCTGCTACTGCTG
CTAGAAGACGACGATCGGTCAAGCGGTGTAGTGTACCCGGTACTATCGGA
AGGACAAGAATAACGCACACCCGTAAGAAAGGCTTGGAGCGCTTTGTTCC
ATGCTGCCTATTCATGGTTGGGTAGTACTGCTGGACGGCTGGTTCGTGAA
ATCGGAAATGGCGCCTCGGGGGTTTCGTTGAGCTGTAGGTTGCATGAGAT
ACTACACTCCCCTGGAGCGATTTTCAAAGCTCGATTAGTCGACAGGACAA
CACAGTCATGGTGCCGATAGTGTCGGCGTTGGAGCCGTCTCGTCGAAAGC
GTTCCGAAAAAAAATCCCAAAAACGTATCATAATGAAATTTCGGCATTCT
CTTCGTCGTGCTGGAGTGGTCGAGCTTTAAATGTCGGTCCAGAGGGTGTG
ATATATTACGTCATGCTACCTTCTTACGGGTGTACATGTTCCAGTTGCTC
TTCTGCCCGGTCCAATCTTTTTAATCTTTGCGGCTACTCTACTCAGGTGG
CTCCGGCGTTACCGCTCGTCCGGCCGTTGCATCTAAATTGTGATGCATGC
GACGATGCTCTTGTAGGCCTTCGCCAGCAGAGTATCCACAACATCTCTTT
CTCTGTCTTTCTATTTCTCCCTGCCTGTCTACCTACCTACCTTTCACTAA
ATCGTAACGTCTGTTCGTTGGTCAGTCCGTCAGAGCGATCGATGCTAGCA
AAAAAACCCACGAACACAACATACGTCTGTCTCGCCCTCACCCCAATGTC
ACCCGCCCGCGCCCACAGCGCCGTGGTGGAGTTCGAAGAGCGCGTGAGCG
AGCTAGTCAAGACAACGGACAACCCGACCTTCGCTCCGGGGGTCCCCCTC
GCCCCAGAGTTCGCGAGCATGCTCTCCAAGGCAAAGGAGACGGCCTTCAA
CGGCATCAGGCCCTACCTGCCCAAGGGCGCCGAGCCCGAGCTTGCTCTCT
TCATGCTGGTCACGCTCCCGGTGCTCACGGTGGCTTTGCGCTCCGCGGAC
GAGAACAGCCGCCGGCCGAAGCAGGACCCCCTGCCGCCGGTCTCCCGCCC
GCCGCGGATCACGCGGTACCCCAACTCTCCGGCAAAGGTGGATGCCGAAG
CGGTGGCCGAGGCCCGCAAGGAGCGGCAGGCGCAGGCCGATGTCGAGGCC
GTGGCGAAGCTGCGCGAGGAGCTGGCGGCACGGGGTCTGGCGGCGGTGCA
AGTGCCGGAGGGCGCTCCGGCGGTGGAAGCGGCGGCGGTGGAGAGTTTGC
ACGGAGGCGTTGCGGCGGCCGTGGCGGAGAAGCCGGACGCGATCACGGCG
GAGCTCGCGCGGCTGCGGGAGGAGCTGGCCGCGGCGGGGAAGCTTGCGGC
CAAGGTGGAGGCGCTGGAGAGGGCCAACGCTAGGTTGATGGGGCAGGTGG
CTGATCTTAGCAGGACGCCCTCCATCGAGGAGGTTCGTCTTAGGGCGGAG
AAGGAAGCCATGAGGTATGTGTGTGTGTTGTTGACATCGATCGCGCTGAC
CAATGAACGGGGACCGTTAGCCTGTGTGCGGATTGAAAGAAACAGAAAAT
GCTTTTATGTGCCATGAATTTGGGCCCCATGAGGGTGTGAGGGGGCGTCA
TGGGGGAGGCTACGCTGTTGTCTGGATTAGGGACAGTAACGGTGTAGCAA
CGGGAGAAGAGCGCAGTTTGTGTGTGTGCGTGTGCTCGTTTTTAGCATCA
GCCGCGTGAACCGGCTGACCAGCGAAGTAGGTTCAGTCTCAGTGCGGTTG
AAATACAGAAAGTACTTGGGTGTGCTGGAGGCGGGAGGCGGTGGAAGAGC
GCCCATGCTCGGTTGTGTGTTGTGTATTGTTGTGCCGCGAAGAATGCTTT
TGTTTTTCTTGACCGTACTCTCGTTTTTTGGTTTTTGTCGGTCTGCCTTT
TGACGCGGTCATTGGTTGGGATCGGTCACGCATACGATGATGAGCGGGCA
TCATGCAACGAGGCGATGGGTCGCAAGGACAATTCAAAACTCAGTCAGTC
AGTCAGGCGCTACAGCACACCGACACCTACGATGTCCTAGTAGACAAGGA
AGTCTCTCGAATTTCACGCCTATGCAGCTCTACGGCATCGAAAGTTAGAA
ACTGAAACAGCGGGAGACGTTTTATCCGTCATCTACCTAACTCGGATGCG
TGTTCGACAGTCTGAAGGCTACCTGACGTTTGGAACTGACAAGCCGTAAG
CGAACGCCCCGTCACACAGGACCATTTCATACCGTCGTGTCTACCTGAAA
TGTTGCGCAAGCTCCTCGCTGTTGGACCAGTACGGATATCAGAAGGTACT
GAACGGAGACCGGAACGATTTTTTACTGTTGTGGAGCCAACAACAACAAC
AACCCCATTCGATGCTGTTGTTCGTTTTGTGTGTGTGTGTCTCTACGTAT
CTCTCCGGGGCGCTACCGCAGAGCGGCGGCGCAGCGCGAGCGAGAGGAGG
CGCGCGAGGCGGCATACGCTGGCGTGCAGGAGAAGGCTACCAAGCTCAGC
GCCGCCCGCGAGAAGCTGTCGGACGCCTTCCCGGCCCGCGAGTCCTTAGC
GGCGGAGGCGGCCTCCCCCGTCAAAAAGAGTCCCGCCGCTTCCGCGAAAA
AGCCTGCTGCCGCAAAGAAACCCGCCGCAAAGAAACCCGCCGCAAAGAAA
CCCGCTGCTGCCGCGAAGAAGAAGAAGACGCCCGCTGAGACTAATAAGAA
GGCAGAAGCGGCTCCGGCAAAGAAGGCCAAAGCTCCGGGGAGGAAAAAGG
CTGCTGCTGCTGCTCCTGCTGCTGCTGACCCGCTTGCCGTCGAGTCCCCG
GAGCCTACGATGTTGCACAACGGGGCATCCGTAATGATGGAGGGGACGGA
GACGGTGGTAGGGGCGGCGGCGGCGGCGGCAGCGGAGGAGGCGGTAACTC
CGAACGAGTACGAGGACATGTCGGAGGACCTGTCGAGAGCAGTGCTCGGG
GTACAGGGGTACGATATGGACGGGCTCGACTTGGAGATGGCCGACCTTCG
CCCGGAAGACCTAGAGGTGTGTGCGTGTATTGCATGCGTCGGGGGGCCCT
GGTGATGGTGTTGTTGCTGTTCCTACTGTCGTGCTGGCGATGAGGCACTC
CTGTTTCTTTGGGGGCGGCGAGTTATGCTTGAGGCATGGTTCACGTTTTG
CCCTGAAAGGTTAAGGTTCGCCGGTAAGGGTGTGGGGACCGTACGGTACC
GCCTTGTTGCTGTTGCGCTAGGCTTTGGCTTGCGTTAGGGGTGGTGCCGG
TCTGCAGTTCGACGATGGGAGGTCGGGTTGCTGCTACCGCGCGCTGTGGT
GCGAGGACTGAGAGGTGGGGAAGGTACCGCAGCTGAAGCGTGTAGACCGC
ACTGACAACCCCTACATAGAATCACGTGGACACGATCCGGCTTCACATTT
AGCCCTCCCTTACGAGGTGGCCTCTTGGGGTTGGGGGATCGGTGAGATGT
TTGGGGGTGACGCTACAGAGACAGGAGCGGTTGCGTAATACTTGTATGGG
TGAAATAATAAAGTTTTTGCATGCATGCAGGTCAAGTCTAACGGTGAGTG
GCCTCTCGAAGTGCTCATTATTTTTCCCGCCTGTCTATCCCTTTGAAATT
TCTTCCCCCTTTATGATCATCTCGCCTCCCTTTCTTCCACGATTCTCAAC
GCATGATGCCACACGACAACACACCCCCCTTGCCTCGACAGGACGTCCCC
TTTCAACGACCCTCCCCACCCCCACCCCGCCTCCTCGACACTCGCGCAGG
AACTCCTAGCTATGGAGATGGGAGGGCTCGACATGGCCTCGCGCGACGAG
GAAGACTTCGGCCCGGAGGACGACGAATCAATGTCTCAGGGACTCCGCAT
GGCGGCAGAATCCGCCCTGGCACACACCTCCGGAGGGGGCGCGGGCCGCA
GGATCCGAACCGCGTCCCCGGTCGGCGCGACCTCCTTGCGCTCCGCCGCC
GGGGGGGCGGTGGCGGCGGTTGCCGAGAGCCGGGGGGGCGCCCCGCAGGC
CACAGCGGTCCGTGACGGTGAGGAGGTGGGCTTTTCGTCTGTGCCTGGCA
CGACCGAGGACGACGAGCTGGCAGCGTTCAGAAGACTGGAGGCGGAGGCG
GTGGCGGACTTCGGTACCGGTGCTGCGGGTTGGGGTGGGCAGCAGGCCCC
GGGTGGTGGTCGCCCACCCGCCCCGGCAGCAGGCGGCGGCGGCGGCGGGG
GGAGAGGGGGGGCTTCTCAGGATGATGGTGACTGGGGGGCGTTGTCGGCG
AAGGCCGTCGGGCGGAAGACGGTGGCGGCGCTGAAGGAGTTCTTGGACGA
GGAGGGGATGGACTATCCCAGCAAGATTAAGAAGGCGGAGCTGGTGGACA
TGGTCCTCAACATGCTCGCCGAGGGGTGATGATGATGATCACTCCGTATA
CCCTTGATTTTTTTTTTTTTTTACAGAAATCGGCGGTTTCAGAACAGCGC
TGTCCACGGGAAGGGGTCCCGCAGAATGGAGACGTTGGTCTCGGCGAACT
CTCTTTGGATCCGTCGGCTGCGCGATTCGATTTGTTGTTCGTGGAGTGGG
AAAACTACTGACTCTACTTTGGTGTTGTTGTTGGTTGCTCGAAGGCAAAG
GGGGAAGCGGGTAGCAGCCTCTCGTGGTGTTTTCTTGCGTCCGGAGGAGC
ATGATTTTGTGGATGAGGGCGTGTGCTCCTGTCAGGCTCCGTTTCCGAAT
GGCCTTCAGTTCAGCGCCATGAGGCAGGCTATTGAGGAGGTCAAGCGGCA
AGAACTGGCGCCGAAGCACGCAGGGTTTGGGCGCTTGTTAAACGAGAACG
AGAGATGGTGGTTGCCACTTCTTTTTTTTTTGCATGAGTTGTACACACCT
TGGGTCAAGAAAATTTCACCAAGTCCCTCTTCCTTCGTGTAGTCCACACG
GATGTGGGTAGTTCCCGGGGTTGAACTACCTGTGTGGAATCTATTGATGC
TTTCCGAGGCAGGACGTCTGTCAATACCCTTTGCTTTTTCGTTTCCCTTT
CTTCGTCTCTCGCACGCAGGCATCTTCTCTTGTCTGGGTGGGTTGACGTC
TACCGTTCGTTGCAACAGGTTTTGGTTTGATTTTTCTCCTTTTCTTTTGG
TCGATATTGTAGAAGCGTTGGAAAAACGTGGTGTCCTCGTCAGGTCGGGT
TTTGTGTCTAATTAGCACCTCCGGCACCGGTTTCAGCTGTTTCTTTTTGG
CCTCAAGGAAGGCTGTTACTGGAGCTGAAGTCGGCTGTGTTGTCCATGTT
GTCACGTTTTATTTGCCTTTCTGGTGTGTGCGACCCAGTCCAGCCAGGGT
GAGGACACTAATGCGTGACGTTGTCATGGGGCCAACGCAACCACGAGCAC
GCACGGGGCGGGGGGTCAATCGTGAATAGAGCGAACAAAACACATCCTTA
CTAATAGGAAAACCAGGAAATTATTCCCCCACCTCAGAAAACCAACTTTT
CGCTCTTATCCCACCATCAGTACAGCAGCAGGATGAATTCGCCGTGTTTG
CTTTTTTGTAGTTGGACGTGTGCGTGCACGCTCGTTGCTTTTATGACGGG
AGACGGGGATTGGAGCAGAGGGGGGGGGAAGCAACCAACGTGTGTGGTAG
ATCGTCCGTAGCAAGCCAGCCCTGGGGTCTTGTGGACCAAGCAGTTTAGT
GGTGAGAAGTGCCATTCCGCAATAATATAGTTGTTTTCTCGAGCTGGTGG
GCTTGATTTTGTCCAGGGGAGAGGGAGGGTACCGCGTATGTCTCTCTGTG
TCGGCACTGGGGGGGGAGCTGTGTCGGACGATATGACGAAGATGTGACAT
GCATATTTGTGTTGAAGGGTTGGACCCCATGTCTGTTTTTTTTTCCTTGC
ACCATGCTTCTTTTGGTGCGATGGCGGCGGTCTGCGAGAGGGAAGAGGGT
TGGGTTTGTGTTCACTATGACAAAATCGAAAGCGAGCGGTGTATTCACAC
TCTGTAGGAGAAACAGCAGTATCACAGCCCCAGGAGATCGGCGGTAACGG
TGGTGAAGAATGAAAGGGCGGGGCAGGGTCGAGGTGTTTTACGATTGATT
GCGATGTCAGTGCTAACTGTTTCCGATGGTATTTCAATGTTGCAAAAGTG
CCTGCAGGGAAAAAGAGCTTCGAAATGCCAGGGTTCATTTAGAAGAACGA
GGTTGCCTAAGGATGAGGCGTTTGATCCGTGCAGCACCGTTTTTCGAGCG
AATACTTATTTGTGCACTTTTTGCGGAGAGCAAAGGCACGCCCTCGTTCG
TTCGTCGCGCTACTGTCGGTAGAGAGCGCGAGCATGGATGGGCTCGATCC
CGATGACTTCGAAGGGTAGAACCAATCCCGATAATTTCGGGTTGTTTACT
CACTAATTGCCGCACCCATGGCCATTTCTTGTCTCCCTCTTTCTTTGCCT
TTGCCTGCCGGTCGCCTTGGCGTTTCAATCACACAACGTTATGCCCGAAC
GAACG

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1472:81..9035+

>mRNA_Ecto-sp13_S_contig1472.3611.1 ID=mRNA_Ecto-sp13_S_contig1472.3611.1|Name=mRNA_Ecto-sp13_S_contig1472.3611.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2901bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1472:81..9035+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGAGTCATGGTGCGCGTCGGCGGCGCAGTGCGCCGAGAGCAGCAAC
GTCAGCGGCCGCGGCGATAGGGCTGTGCCTCGCCACCGTGACGACCACAC
ACACGTCTCTCGCTTTCCACCTGCATACCGGCACGCGCGGGATCGCCAGC
AGCAGCGTGGGTGGATGCGACGGTACTACGACTACGGCGGGGCGGCGAAG
GTCTGCCACCGCTGTTGCCGCGTGTCGAGGGTCATCATCATCCTCACCAC
CACCGCCGGATGAACGACCACAACGTCATGATACCGACAGCAACAGCAAG
GGCGGTGGGGGAGCGGCGAAGGAGTTCTCGGCGGCGCTGCTGTCGGCCAT
GCTCCTTGGCAACTCGCAAGTCTCGGGTGCAGCAACAGCCGCGGCGCAGG
CACCGGGCACCGCTGACCAAAACCGCCTGATCGCCGACCTGGAGCGCAGG
CTCACGGGCGTCTCGAGTGGTCCTGCTGCAGCTGCTGCTGCTTCCACTGC
TGACGCACCCGGCGATGCGGCAGCAACCGCGCCTGCTTCTCCCGCTGGGA
GCGTAGAAGCCCCGACCGCTGCTGCTACCGTCGACTCCACTCCCCGGTTT
CCATCAATGTTTGCAACCCCCTCGTCATCGACGACCCAACAGGCGGCACC
CGCAGCAGCAGCAGCAGCAAAGCAGACCTCTACTCCCGCGTCCAAGCCCT
CCATAAAGATGAAGGAGTACAAGTTCACGGTTAAGCTGCCGGAGTTTGAC
GTCCCCACAGTGGGTCCCATCACGGTGCCGGAGGAGGGTAACGTGTTCGC
TGGGGTGGAGCCGCGGGCCATTTTCAAACCTCCGAGCAGGGAGAGGGTGC
CGCCCCAGCCCGACTTCCCCGCAGCGGGCGCGATCAGGGCTGCGCTGCAG
AGCGCGGGCAAGGGGGACGGCGTGAAGGAGCTGACGGATGCGTTTGCGGC
TGCTGTACCCAGGCAGGGTGACTACAACCGCGCCGTGGTGGAGTTCGAAG
AGCGCGTGAGCGAGCTAGTCAAGACAACGGACAACCCGACCTTCGCTCCG
GGGGTCCCCCTCGCCCCAGAGTTCGCGAGCATGCTCTCCAAGGCAAAGGA
GACGGCCTTCAACGGCATCAGGCCCTACCTGCCCAAGGGCGCCGAGCCCG
AGCTTGCTCTCTTCATGCTGGTCACGCTCCCGGTGCTCACGGTGGCTTTG
CGCTCCGCGGACGAGAACAGCCGCCGGCCGAAGCAGGACCCCCTGCCGCC
GGTCTCCCGCCCGCCGCGGATCACGCGGTACCCCAACTCTCCGGCAAAGG
TGGATGCCGAAGCGGTGGCCGAGGCCCGCAAGGAGCGGCAGGCGCAGGCC
GATGTCGAGGCCGTGGCGAAGCTGCGCGAGGAGCTGGCGGCACGGGGTCT
GGCGGCGGTGCAAGTGCCGGAGGGCGCTCCGGCGGTGGAAGCGGCGGCGG
TGGAGAGTTTGCACGGAGGCGTTGCGGCGGCCGTGGCGGAGAAGCCGGAC
GCGATCACGGCGGAGCTCGCGCGGCTGCGGGAGGAGCTGGCCGCGGCGGG
GAAGCTTGCGGCCAAGGTGGAGGCGCTGGAGAGGGCCAACGCTAGGTTGA
TGGGGCAGGTGGCTGATCTTAGCAGGACGCCCTCCATCGAGGAGGTTCGT
CTTAGGGCGGAGAAGGAAGCCATGAGAGCGGCGGCGCAGCGCGAGCGAGA
GGAGGCGCGCGAGGCGGCATACGCTGGCGTGCAGGAGAAGGCTACCAAGC
TCAGCGCCGCCCGCGAGAAGCTGTCGGACGCCTTCCCGGCCCGCGAGTCC
TTAGCGGCGGAGGCGGCCTCCCCCGTCAAAAAGAGTCCCGCCGCTTCCGC
GAAAAAGCCTGCTGCCGCAAAGAAACCCGCCGCAAAGAAACCCGCCGCAA
AGAAACCCGCTGCTGCCGCGAAGAAGAAGAAGACGCCCGCTGAGACTAAT
AAGAAGGCAGAAGCGGCTCCGGCAAAGAAGGCCAAAGCTCCGGGGAGGAA
AAAGGCTGCTGCTGCTGCTCCTGCTGCTGCTGACCCGCTTGCCGTCGAGT
CCCCGGAGCCTACGATGTTGCACAACGGGGCATCCGTAATGATGGAGGGG
ACGGAGACGGTGGTAGGGGCGGCGGCGGCGGCGGCAGCGGAGGAGGCGGT
AACTCCGAACGAGTACGAGGACATGTCGGAGGACCTGTCGAGAGCAGTGC
TCGGGGTACAGGGGTACGATATGGACGGGCTCGACTTGGAGATGGCCGAC
CTTCGCCCGGAAGACCTAGAGGAACTCCTAGCTATGGAGATGGGAGGGCT
CGACATGGCCTCGCGCGACGAGGAAGACTTCGGCCCGGAGGACGACGAAT
CAATGTCTCAGGGACTCCGCATGGCGGCAGAATCCGCCCTGGCACACACC
TCCGGAGGGGGCGCGGGCCGCAGGATCCGAACCGCGTCCCCGGTCGGCGC
GACCTCCTTGCGCTCCGCCGCCGGGGGGGCGGTGGCGGCGGTTGCCGAGA
GCCGGGGGGGCGCCCCGCAGGCCACAGCGGTCCGTGACGGTGAGGAGGTG
GGCTTTTCGTCTGTGCCTGGCACGACCGAGGACGACGAGCTGGCAGCGTT
CAGAAGACTGGAGGCGGAGGCGGTGGCGGACTTCGGTACCGGTGCTGCGG
GTTGGGGTGGGCAGCAGGCCCCGGGTGGTGGTCGCCCACCCGCCCCGGCA
GCAGGCGGCGGCGGCGGCGGGGGGAGAGGGGGGGCTTCTCAGGATGATGG
TGACTGGGGGGCGTTGTCGGCGAAGGCCGTCGGGCGGAAGACGGTGGCGG
CGCTGAAGGAGTTCTTGGACGAGGAGGGGATGGACTATCCCAGCAAGATT
AAGAAGGCGGAGCTGGTGGACATGGTCCTCAACATGCTCGCCGAGGGGTG
A