prot_Ecto-sp13_S_contig1472.3611.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1472.3611.1
Unique Nameprot_Ecto-sp13_S_contig1472.3611.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length967
Homology
BLAST of mRNA_Ecto-sp13_S_contig1472.3611.1 vs. uniprot
Match: A0A6H5JLA9_9PHAE (HeH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLA9_9PHAE)

HSP 1 Score: 1049 bits (2713), Expect = 0.000e+0
Identity = 861/971 (88.67%), Postives = 870/971 (89.60%), Query Frame = 0
Query:    1 MASHGARRRRSAPRAATSAAAAIGLCLATVTTTHTSLAFHLHTGTRGIASSSVGGCDGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAMLLGNSQVSGAATAAAQAPGTADQNRLIADLERRLTGVSSGPAAAAAASTADAPGDXXXXXXXSPAGSVEAPTAAATVDSTPRFPSMFATPSSXXXXXXXXXXXXXXKQTSTPASKPSIKMKEYKFTVKLPEFDVPTVGPITVPEEGNVFAGVEPRAIFKPPSRERVPPQPDFPAAGAIRAALQSAGKGDGVKELTDAFAAAVPRQGDYNRAVVEFEERVSELVKTTDNPTFAPGVPLAPEFASMLSKAKETAFNGIRPYLPKGAEPELALFMLVTLPVLTVALRSADENSRRPKQDPLPPVSRPPRITRYPNSPAKVDAEAVAEARKERQAQAXXXXXXXXXEELAARGLAAVQVPEGAPAVEAAA-VESLHGGVAAAVAEKPDAITAELARLREELAAAGKLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKLSDAFPARESLAAEAASPVKKSXXXXXXXXXXXXXXXXXXXXXXXXAAAAKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAADPLAVESPEPTMLHNGASVMMEGTETVVGAAAAAAA---EEAVTPNEYEDMSEDLSRAVLGVQGYDMDGLDLEMADLRPEDLEELLAMEMGGLDMASRDEEDFGPEDDESMSQGLRMAAESALAHTSGGGAGRRIRTASPVGATSLRSAAGGAVAAVAESRGGAPQATAVRDGEEVGFSSVPGTTEDDELAAFRRLEAEAVADFGTGAAGWGGQQAXXXXXXXXXXXXXXXXXXXXXXS-QDDGDWGALSAKAVGRKTVAALKEFLDEEGMDYPSKIKKAELVDMVLNMLAEG 966
            MASHGARRRRSAPRAAT+AAAAIGLCLATVTTTHTSLAFHLHTGTRGIASSSVGGCD    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       SAMLLGN QVSGAATA AQAPGTADQNRLIADLERRLT VSSGPAAAAA STADA G XXXXXXX      EAPTAAATVDS PR PSMFA    XXXXXXXXXXXX  KQTSTPA KPSIKMKEYKFTVKLPE DVPTVGPITVPEEGNVFAGVEP AIFK PSRERV P PDFPAAGAIR ALQSAGKGDGVKELTDAFAAAVPRQGDYNRAV+EFEERVSELVKTT NPTFAPGVPLAPEF SMLSKAKETAFNGIRPYLPKGAEPELALFMLVTLPVLTVALRSADENSRRPKQDPLPPVSRPPRITRYPNSPAKVDAEAVAEA KERQAQA         EELA RGLAAVQV EGAPAVEAAA VE  HGGVAAAVAEKPDAITAELARLREELAA      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKLS+AFPARESLAAEAAS     XXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        VESPEPTMLHNGASVMMEGTETVVG          E+AVTPNEYEDMSE+LSRAVLGVQGYDMDGLDLEMADLRPEDLEELLA+EMGGLDMASRDEEDFGPEDDESMSQGLRMAAESALAHTSGGGAGRRIRTASPVGATSLRSAAGGA AAVAESRGGAPQATAVRDGE VG SSVPG+TEDDELAAFRRLEAEAV DFGT AAGWGG   XXXXXXXXXXXXXXXXXXXXX + QDDGDWGALSAKAVGRKTVAALKEFLDEEG+DYPSKIKKAELVDMVLNMLAEG
Sbjct:    1 MASHGARRRRSAPRAATTAAAAIGLCLATVTTTHTSLAFHLHTGTRGIASSSVGGCDDAMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSAALLSAMLLGNPQVSGAATATAQAPGTADQNRLIADLERRLTSVSSGPAAAAA-STADALGXXXXXXXXXXXXXTEAPTAAATVDSNPRVPSMFAP---XXXXXXXXXXXXAAKQTSTPAPKPSIKMKEYKFTVKLPELDVPTVGPITVPEEGNVFAGVEPWAIFKAPSRERVLPHPDFPAAGAIRGALQSAGKGDGVKELTDAFAAAVPRQGDYNRAVMEFEERVSELVKTTHNPTFAPGVPLAPEFTSMLSKAKETAFNGIRPYLPKGAEPELALFMLVTLPVLTVALRSADENSRRPKQDPLPPVSRPPRITRYPNSPAKVDAEAVAEALKERQAQADVEAVAKLREELAVRGLAAVQVQEGAPAVEAAAAVEGSHGGVAAAVAEKPDAITAELARLREELAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKLSNAFPARESLAAEAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---VESPEPTMLHNGASVMMEGTETVVGXXXXXXXXXXEDAVTPNEYEDMSENLSRAVLGVQGYDMDGLDLEMADLRPEDLEELLALEMGGLDMASRDEEDFGPEDDESMSQGLRMAAESALAHTSGGGAGRRIRTASPVGATSLRSAAGGAAAAVAESRGGAPQATAVRDGEGVGLSSVPGSTEDDELAAFRRLEAEAVGDFGTAAAGWGGXXXXXXXXXXXXXXXXXXXXXXXXGAPQDDGDWGALSAKAVGRKTVAALKEFLDEEGIDYPSKIKKAELVDMVLNMLAEG 964          
BLAST of mRNA_Ecto-sp13_S_contig1472.3611.1 vs. uniprot
Match: D7FLN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN9_ECTSI)

HSP 1 Score: 627 bits (1618), Expect = 2.930e-212
Identity = 497/620 (80.16%), Postives = 506/620 (81.61%), Query Frame = 0
Query:  361 MLSKAKETAFNGIRPYLPKGAEPELALFMLVTLPVLTVALRSADENSRRPKQDPLPPVSRPPRITRYPNSPAKVDAEAVAEARKERQAQAXXXXXXXXXEELAARGLAAVQVPEGAPAVEAAA---VESLHGGVAAAVAEKPDAITAELARLREELAAAGKLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKLSDAFPARESLAAEAASPVKKSXXXXXXXXXXXXXXXXXXXXXXXXAAAAKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAADPLAVESPEPTMLHNGASVMMEGTETVVGAAAAAAAEE---------AVTPNEYEDMSEDLSRAVLGVQGYDMDGLDLEMADLRPEDLEELLAMEMGGLDMASRDEEDFGPEDDESMSQGLRMAAESALAHTSGGGAGRRIRTASPVGATSLRSAAGGAVAAVAESRGGAPQATAVRDGEEVGFSSVPGTTED-DELAAFRRLEAEAVADFGTGAAGWGGQQAXXXXXXXXXXXXXXXXXXXXXXS-QDDGDWGALSAKAVGRKTVAALKEFLDEEGMDYPSKIKKAELVDMVLNMLAEG 966
            MLSKAKE AFNGIRPYLPKGAE ELALFMLVTLPVLTVALRSADENSRRPK DPLPPV+RPPRITRYPNSPAKVDAEAVAEARKERQAQAXXXXX    EELA RGLAAV V +GAPAVEAAA   V  LHGGVAAAVA KPDAITAELARLREELAAAGKL  XXXXXXXXXXXXXXXXXXXXXXXXX                  XXXXX                   EKLSDAFPARESLAAEAAS     XXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXX XXXXXXXXXX       AVESPEPTMLHNGASVMMEGTET VGA                 AVTPNEYEDMSEDLSRAVLGVQGYDMDGLDLEM DLRPEDLEELLA+EMGGLDMA+RDEEDFGPEDDESMSQGLRMAAESALAHTSGGGAGRRIRTASPVGATSLRS  G A AAVAESRGGAPQATAVR+GE VGFSSVPGT E+ DELAAFRRLEAEAVADFGTGAAGWGGQQ+          XXXXXXXXXX  + QDDGDWGALSAKAVGRKTVAALKEFLDEEGMDYPSKIKKAELVDMVLNMLA+G
Sbjct:    1 MLSKAKENAFNGIRPYLPKGAETELALFMLVTLPVLTVALRSADENSRRPKPDPLPPVARPPRITRYPNSPAKVDAEAVAEARKERQAQAXXXXXAKLREELAVRGLAAVTVADGAPAVEAAAGAVVGGLHGGVAAAVAAKPDAITAELARLREELAAAGKLXXXXXXXXXXXXXXXXXXXXXXXXXXXEEIRLRSEKEAMRAAAQRXXXXXREAAYAGVQEKATKLSAAREKLSDAFPARESLAAEAASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXX------XAVESPEPTMLHNGASVMMEGTETAVGAXXXXXXXXXXXXXXXXAAVTPNEYEDMSEDLSRAVLGVQGYDMDGLDLEMTDLRPEDLEELLALEMGGLDMAARDEEDFGPEDDESMSQGLRMAAESALAHTSGGGAGRRIRTASPVGATSLRSG-GSAAAAVAESRGGAPQATAVREGEGVGFSSVPGTIEEEDELAAFRRLEAEAVADFGTGAAGWGGQQSVGVGRQPAPAXXXXXXXXXXGGAPQDDGDWGALSAKAVGRKTVAALKEFLDEEGMDYPSKIKKAELVDMVLNMLAKG 613          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1472.3611.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JLA9_9PHAE0.000e+088.67HeH domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FLN9_ECTSI2.930e-21280.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 506..543
NoneNo IPR availableCOILSCoilCoilcoord: 548..572
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 404..966
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 19..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 385..403
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..384

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1472contigEcto-sp13_S_contig1472:335..6959 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1472.3611.1mRNA_Ecto-sp13_S_contig1472.3611.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1472 81..9035 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1472.3611.1 ID=prot_Ecto-sp13_S_contig1472.3611.1|Name=mRNA_Ecto-sp13_S_contig1472.3611.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=967bp
MASHGARRRRSAPRAATSAAAAIGLCLATVTTTHTSLAFHLHTGTRGIAS
SSVGGCDGTTTTAGRRRSATAVAACRGSSSSSPPPPDERPQRHDTDSNSK
GGGGAAKEFSAALLSAMLLGNSQVSGAATAAAQAPGTADQNRLIADLERR
LTGVSSGPAAAAAASTADAPGDAAATAPASPAGSVEAPTAAATVDSTPRF
PSMFATPSSSTTQQAAPAAAAAAKQTSTPASKPSIKMKEYKFTVKLPEFD
VPTVGPITVPEEGNVFAGVEPRAIFKPPSRERVPPQPDFPAAGAIRAALQ
SAGKGDGVKELTDAFAAAVPRQGDYNRAVVEFEERVSELVKTTDNPTFAP
GVPLAPEFASMLSKAKETAFNGIRPYLPKGAEPELALFMLVTLPVLTVAL
RSADENSRRPKQDPLPPVSRPPRITRYPNSPAKVDAEAVAEARKERQAQA
DVEAVAKLREELAARGLAAVQVPEGAPAVEAAAVESLHGGVAAAVAEKPD
AITAELARLREELAAAGKLAAKVEALERANARLMGQVADLSRTPSIEEVR
LRAEKEAMRAAAQREREEAREAAYAGVQEKATKLSAAREKLSDAFPARES
LAAEAASPVKKSPAASAKKPAAAKKPAAKKPAAKKPAAAAKKKKTPAETN
KKAEAAPAKKAKAPGRKKAAAAAPAAADPLAVESPEPTMLHNGASVMMEG
TETVVGAAAAAAAEEAVTPNEYEDMSEDLSRAVLGVQGYDMDGLDLEMAD
LRPEDLEELLAMEMGGLDMASRDEEDFGPEDDESMSQGLRMAAESALAHT
SGGGAGRRIRTASPVGATSLRSAAGGAVAAVAESRGGAPQATAVRDGEEV
GFSSVPGTTEDDELAAFRRLEAEAVADFGTGAAGWGGQQAPGGGRPPAPA
AGGGGGGGRGGASQDDGDWGALSAKAVGRKTVAALKEFLDEEGMDYPSKI
KKAELVDMVLNMLAEG*
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