prot_Ecto-sp13_S_contig14715.3607.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14715.3607.1
Unique Nameprot_Ecto-sp13_S_contig14715.3607.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length304
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14715.3607.1 vs. uniprot
Match: A0A6H5LC44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC44_9PHAE)

HSP 1 Score: 237 bits (605), Expect = 9.400e-69
Identity = 144/162 (88.89%), Postives = 147/162 (90.74%), Query Frame = 0 
Query:   43 GTGRRAERGRLSTLLDQLKDEIDFHAAAKRDMDLELKRVRQRHRLMEDRAAEEKQKTAAAEAKVVKLQAKNKFLSEENTTLKQILQQIQDAGVLQQESGGAPQSXXXXXXQP---SATGIALPTSESSSGVSSGTPASSGSNKGGIVAHGQSPGGTGIGGML 201
            G GRRAERGRLSTLLDQLKDEIDFHAAAKRDMDLELKRVRQRHRLMEDRAAEEKQKTAA+EAKV KLQAKNKFLSEENT LKQILQQIQDAGVL QE+GGA QS  XXXX     S TGIALP SESSSGVSSGTPASS SNKGGI+AHGQSPGGTGIGGML
Sbjct:  398 GXGRRAERGRLSTLLDQLKDEIDFHAAAKRDMDLELKRVRQRHRLMEDRAAEEKQKTAASEAKVAKLQAKNKFLSEENTKLKQILQQIQDAGVLPQEAGGASQSHQXXXXXXXXXSPTGIALPASESSSGVSSGTPASSSSNKGGIMAHGQSPGGTGIGGML 559
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BLAST of mRNA_Ecto-sp13_S_contig14715.3607.1 vs. uniprot
Match: D7FQ62_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ62_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 1.110e-47
Identity = 91/94 (96.81%), Postives = 92/94 (97.87%), Query Frame = 0 
Query:   39 VKDDGTGRRAERGRLSTLLDQLKDEIDFHAAAKRDMDLELKRVRQRHRLMEDRAAEEKQKTAAAEAKVVKLQAKNKFLSEENTTLKQILQQIQD 132
            VKDDGTGRRAERGRLSTLLDQLKDEIDFHAAAKRDMDLELKRVRQRHRLMEDRAAEEKQKTAA+EAKV KLQAKNKFLSEENT LKQILQQIQD
Sbjct:   39 VKDDGTGRRAERGRLSTLLDQLKDEIDFHAAAKRDMDLELKRVRQRHRLMEDRAAEEKQKTAASEAKVAKLQAKNKFLSEENTKLKQILQQIQD 132
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14715.3607.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LC44_9PHAE9.400e-6988.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQ62_ECTSI1.110e-4796.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 57..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14715contigEcto-sp13_S_contig14715:2194..4288 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14715.3607.1mRNA_Ecto-sp13_S_contig14715.3607.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14715 2194..4288 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14715.3607.1 ID=prot_Ecto-sp13_S_contig14715.3607.1|Name=mRNA_Ecto-sp13_S_contig14715.3607.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=304bp
MGLGASSGGGSGGGSSQGGGGGAGSGIGGTGVAGGGGGVKDDGTGRRAER
GRLSTLLDQLKDEIDFHAAAKRDMDLELKRVRQRHRLMEDRAAEEKQKTA
AAEAKVVKLQAKNKFLSEENTTLKQILQQIQDAGVLQQESGGAPQSQQRQ
QQQPSATGIALPTSESSSGVSSGTPASSGSNKGGIVAHGQSPGGTGIGGM
LAAAATAKAQQQAQQQGKPQQHQQQQHQPQQQQQQQQQQQQQQQQQHQHQ
QQTPGQQGISSSSSSSSNNSSWAWVPALEYLRRHRGWRTRGRPNGEDRAI
RLG*
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