prot_Ecto-sp13_S_contig14714.3604.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14714.3604.1
Unique Nameprot_Ecto-sp13_S_contig14714.3604.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length130
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14714.3604.1 vs. uniprot
Match: A0A6H5KRL3_9PHAE (TPR_MLP1_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRL3_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 5.740e-33
Identity = 74/76 (97.37%), Postives = 74/76 (97.37%), Query Frame = 0 
Query:    1 QNHLEQQKNDALDAQNKAKDIALANQALKAEKDMAETSERRLREENEHLRKEAREKNALVDKLTDTDRAVEAGKRA 76
            QNHLEQQKNDALDAQNKAKDIALANQALKAEKDMA TSERRLREENEHLRKEAREKNALV KLTDTDRAVEAGKRA
Sbjct:  310 QNHLEQQKNDALDAQNKAKDIALANQALKAEKDMATTSERRLREENEHLRKEAREKNALVHKLTDTDRAVEAGKRA 385
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BLAST of mRNA_Ecto-sp13_S_contig14714.3604.1 vs. uniprot
Match: D7FMD3_ECTSI (TPR_MLP1_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMD3_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 1.430e-12
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = 0 
Query:   88 MRRKAEDDRRAVAQAELEQTKQASQAREKTRELEGKISALKA 129
            MRRKAEDDRRAVAQAELEQTKQASQAREKTRELEGKISALKA
Sbjct:    1 MRRKAEDDRRAVAQAELEQTKQASQAREKTRELEGKISALKA 42
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14714.3604.1 vs. uniprot
Match: D7FMD4_ECTSI (Similar to TPR, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMD4_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 7.470e-10
Identity = 35/36 (97.22%), Postives = 35/36 (97.22%), Query Frame = 0 
Query:    1 QNHLEQQKNDALDAQNKAKDIALANQALKAEKDMAE 36
            QNHLEQQKNDALDAQNK KDIALANQALKAEKDMAE
Sbjct:  264 QNHLEQQKNDALDAQNKVKDIALANQALKAEKDMAE 299
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14714.3604.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KRL3_9PHAE5.740e-3397.37TPR_MLP1_2 domain-containing protein n=1 Tax=Ectoc... [more]
D7FMD3_ECTSI1.430e-12100.00TPR_MLP1_2 domain-containing protein n=1 Tax=Ectoc... [more]
D7FMD4_ECTSI7.470e-1097.22Similar to TPR, partial n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 71..130
NoneNo IPR availableCOILSCoilCoilcoord: 25..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14714contigEcto-sp13_S_contig14714:1913..3269 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14714.3604.1mRNA_Ecto-sp13_S_contig14714.3604.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14714 1913..3271 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14714.3604.1 ID=prot_Ecto-sp13_S_contig14714.3604.1|Name=mRNA_Ecto-sp13_S_contig14714.3604.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=130bp
QNHLEQQKNDALDAQNKAKDIALANQALKAEKDMAETSERRLREENEHLR
KEAREKNALVDKLTDTDRAVEAGKRAELAALQEELTRMRRKAEDDRRAVA
QAELEQTKQASQAREKTRELEGKISALKAR
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