prot_Ecto-sp13_S_contig14714.3605.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14714.3605.1
Unique Nameprot_Ecto-sp13_S_contig14714.3605.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length145
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14714.3605.1 vs. uniprot
Match: D7FMD3_ECTSI (TPR_MLP1_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMD3_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 5.470e-59
Identity = 137/142 (96.48%), Postives = 139/142 (97.89%), Query Frame = 0 
Query:    1 GEKLTAAAAXXXXSEKVAATKAVELSARLNEARARLVTGGGGGAGAXXXXXXXXXXXXXXXXLDDGMAGQLAEVGKLQMELESMRADLKAKTEALATSERQRGQYEAMAKSKQKHVEALEAAGKAAKEDLEGKVNEALARAQ 142
            GEKLTAAAAXXXXSEKVAATKAVELSARLNEARARLVTG GGGAG XXXXXXXXXXXXXXXXLDDGMAGQLAEVGKLQMELESMRADLKAKTEAL+TSERQRGQYEAMAKSKQKHVEALEAAGKA KE+LEGKVNEALARAQ
Sbjct:   44 GEKLTAAAAXXXXSEKVAATKAVELSARLNEARARLVTGAGGGAGXXXXXXXXXXXXXXXXXLDDGMAGQLAEVGKLQMELESMRADLKAKTEALSTSERQRGQYEAMAKSKQKHVEALEAAGKATKEELEGKVNEALARAQ 185
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BLAST of mRNA_Ecto-sp13_S_contig14714.3605.1 vs. uniprot
Match: A0A6H5KRL3_9PHAE (TPR_MLP1_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRL3_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 4.570e-48
Identity = 129/154 (83.77%), Postives = 130/154 (84.42%), Query Frame = 0 
Query:    1 GEKLTAAAAXXXXSEKVAATKAVELSARLNEARARLVTGGGGGAGAXXXXXXXXXXXXXXXXLDDGMAGQLAEVGKLQMELE---------SMRADLKAKTEALATSERQRGQYEAMAKSKQKHVEALEAAGKAAKEDLEGKVNEALARAQAAE 145
            GEKLTAA  XXXXSEKVA TKAVELSARLNEARARLVTG GG    XXXXXXXXX   X   LDDGMAGQLAEVGKLQMELE         SMRADLKAKTEALATSERQRGQYEAMAKSKQKHVEALEAAGKA KE+LEGKVNEALARAQAAE
Sbjct:  388 GEKLTAAXXXXXXSEKVATTKAVELSARLNEARARLVTGAGGXX-XXXXXXXXXXGVSXGGGLDDGMAGQLAEVGKLQMELEVGGAVGWTGSMRADLKAKTEALATSERQRGQYEAMAKSKQKHVEALEAAGKATKEELEGKVNEALARAQAAE 540
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14714.3605.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMD3_ECTSI5.470e-5996.48TPR_MLP1_2 domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5KRL3_9PHAE4.570e-4883.77TPR_MLP1_2 domain-containing protein n=1 Tax=Ectoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 74..101
NoneNo IPR availableCOILSCoilCoilcoord: 116..145
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..145
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14714contigEcto-sp13_S_contig14714:3430..4313 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14714.3605.1mRNA_Ecto-sp13_S_contig14714.3605.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14714 3430..4313 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14714.3605.1 ID=prot_Ecto-sp13_S_contig14714.3605.1|Name=mRNA_Ecto-sp13_S_contig14714.3605.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=145bp
GEKLTAAAAAAAASEKVAATKAVELSARLNEARARLVTGGGGGAGAGGGG
AGSGGGVSGGGGLDDGMAGQLAEVGKLQMELESMRADLKAKTEALATSER
QRGQYEAMAKSKQKHVEALEAAGKAAKEDLEGKVNEALARAQAAE
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