prot_Ecto-sp13_S_contig1471.3602.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1471.3602.1
Unique Nameprot_Ecto-sp13_S_contig1471.3602.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length180
Homology
BLAST of mRNA_Ecto-sp13_S_contig1471.3602.1 vs. uniprot
Match: D7FL45_ECTSI (Plastoquinol--plastocyanin reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL45_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 2.500e-122
Identity = 177/179 (98.88%), Postives = 179/179 (100.00%), Query Frame = 0
Query:    1 MKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVVFKEWKETDFRTGDQPWW 179
            MKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKV+FKEWKETDFRTGD+PWW
Sbjct:   46 MKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVIFKEWKETDFRTGDKPWW 224          
BLAST of mRNA_Ecto-sp13_S_contig1471.3602.1 vs. uniprot
Match: A0A835YPA4_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPA4_9STRA)

HSP 1 Score: 277 bits (708), Expect = 2.350e-92
Identity = 129/177 (72.88%), Postives = 145/177 (81.92%), Query Frame = 0
Query:    3 MSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVVFKEWKETDFRTGDQPWW 179
            MS+ E+ FVPDM+RR AMNLILAGS GV VLGLAVPYIAFFVP        GV A+DA+G +VTVE WL TH  GSREL EGIKGDATYL V +DK +QD+GIVAVCTHLGCVVPW +AENKF+CPCHGSQY+  GKV+RGPAPLSLALSH++   GKVVFK W ETDFRTG+ PWW
Sbjct:   45 MSAAEDAFVPDMNRRVAMNLILAGSAGVVVLGLAVPYIAFFVPKSAGNAGGGVIARDAVGQDVTVEGWLGTHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNADGKVVRGPAPLSLALSHIDTESGKVVFKPWTETDFRTGEAPWW 221          
BLAST of mRNA_Ecto-sp13_S_contig1471.3602.1 vs. uniprot
Match: A0A836CBH8_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBH8_9STRA)

HSP 1 Score: 275 bits (703), Expect = 1.360e-91
Identity = 127/179 (70.95%), Postives = 146/179 (81.56%), Query Frame = 0
Query:    1 MKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVVFKEWKETDFRTGDQPWW 179
            +KMS+ E+ FVPDM+RR AMN ILAGS GV VLGLA+PYI+FFVP        GV A+DA+G +VTVE W+ATH  GSREL EGIKGDATYL V +DK +QD+GIVAVCTHLGCVVPW +AENKF+CPCHGSQY+  GKV+RGPAPLSLALSH+E   G VVFK W ETDFRTG+ PWW
Sbjct:   43 IKMSAAEDAFVPDMNRRVAMNAILAGSAGVVVLGLAIPYISFFVPKSAGGAGGGVIARDAVGQDVTVEGWVATHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNMDGKVVRGPAPLSLALSHIETDTGNVVFKPWTETDFRTGEAPWW 221          
BLAST of mRNA_Ecto-sp13_S_contig1471.3602.1 vs. uniprot
Match: W7TXJ0_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXJ0_9STRA)

HSP 1 Score: 267 bits (683), Expect = 2.480e-88
Identity = 120/179 (67.04%), Postives = 143/179 (79.89%), Query Frame = 0
Query:    1 MKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVVFKEWKETDFRTGDQPWW 179
            M  +  EE FVPDMDRR  MN IL GS+G+NV GLAVPYIAFFVP        G+ AKDA+G++VTV+ WL+TH  G R L +G+KGDATYL+V EDK +++YG+ AVCTHLGCVVPWNKAE+KF+CPCHGSQYD+TGKV+RGPAPLSLAL+HV+E DGKV+   W ETDFRT   PWW
Sbjct:   58 MAEAVGEEPFVPDMDRRKLMNTILLGSVGLNVAGLAVPYIAFFVPRTGGGAGGGLAAKDALGDDVTVQGWLSTHQAGDRSLVQGLKGDATYLIVKEDKTIENYGLNAVCTHLGCVVPWNKAESKFICPCHGSQYDKTGKVVRGPAPLSLALAHVKESDGKVLLTPWTETDFRTDTAPWW 236          
BLAST of mRNA_Ecto-sp13_S_contig1471.3602.1 vs. uniprot
Match: A0A7S1U2M5_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2M5_9STRA)

HSP 1 Score: 265 bits (678), Expect = 1.090e-86
Identity = 117/179 (65.36%), Postives = 141/179 (78.77%), Query Frame = 0
Query:    1 MKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVVFKEWKETDFRTGDQPWW 179
            M M+++E+ FVPDMDRR  MN IL  S+GV  LG+AVPYI+FFVP        G  AKDA+GN+VT   WL TH  G+REL +G+KGDATYL+V +DK +++YG+ AVCTHLGCVVPWN A+ KFMCPCHGSQY++ GKV+RGPAPLSLAL+HVE  DGKVVF  W ETDFRTG+ PWW
Sbjct:  120 MTMAASEDAFVPDMDRRNVMNAILTASVGVAGLGMAVPYISFFVPAGSGGGGSGTIAKDALGNDVTESGWLGTHNAGARELVQGLKGDATYLIVNDDKTLENYGLSAVCTHLGCVVPWNAAQGKFMCPCHGSQYNKEGKVVRGPAPLSLALAHVENKDGKVVFTPWTETDFRTGEAPWW 298          
BLAST of mRNA_Ecto-sp13_S_contig1471.3602.1 vs. uniprot
Match: A0A835ZDT9_9STRA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT9_9STRA)

HSP 1 Score: 248 bits (633), Expect = 3.660e-81
Identity = 117/182 (64.29%), Postives = 138/182 (75.82%), Query Frame = 0
Query:    3 MSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXG-VTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTED----KKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVVFKEWKETDFRTGDQPWW 179
            MS+ +E +VPDM RR A+NLIL    GV VLGLA+PY+A FVP        G V A+DA+G EVT E WLATH  GSREL EG+KGDATYL+V +D    K ++D GIVAVCTH+GCVVPWN AENKF+CPCH SQYD  G+V+RGPAPLSLALSHV+   GKV+ + W ETDFRTG+ PWW
Sbjct:   26 MSAADEAYVPDMGRRQALNLILVSFTGVTVLGLAIPYVALFVPKHAEGGRSGSVVARDALGQEVTSEGWLATHLPGSRELVEGMKGDATYLIVDKDELHGKAIRDLGIVAVCTHMGCVVPWNAAENKFICPCHASQYDANGRVVRGPAPLSLALSHVDTGSGKVLLRPWTETDFRTGEAPWW 207          
BLAST of mRNA_Ecto-sp13_S_contig1471.3602.1 vs. uniprot
Match: A0A2D5MSC7_9BACT (Cytochrome b6-f complex iron-sulfur subunit n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2D5MSC7_9BACT)

HSP 1 Score: 244 bits (622), Expect = 1.010e-79
Identity = 109/171 (63.74%), Postives = 133/171 (77.78%), Query Frame = 0
Query:   10 FVPDMDRRTAMNLILA-GSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVVFKEWKETDFRTGDQPWW 179
            FVPDM+RR  MNLIL  G +  +V GLA+PY+ FF+P        G+ A    G+ +T ESWL+TH  GSREL +G+KGDATYLVV EDKK++DYGI AVCTHLGCVVPWNK+ NKFMCPCHGSQYD++GKV+RGPAPLSLAL+H+ + +G + F +W ETDFRTG  PWW
Sbjct:   20 FVPDMERRNIMNLILVFGGLVPSVGGLAIPYVLFFIPRTSGKSEAGIPALTKSGDTITYESWLSTHASGSRELVQGLKGDATYLVVDEDKKIRDYGINAVCTHLGCVVPWNKSANKFMCPCHGSQYDESGKVVRGPAPLSLALAHITDTNGVLTFSQWTETDFRTGLNPWW 190          
BLAST of mRNA_Ecto-sp13_S_contig1471.3602.1 vs. uniprot
Match: A0A7S2V1Z6_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Z6_9STRA)

HSP 1 Score: 245 bits (626), Expect = 3.560e-79
Identity = 105/173 (60.69%), Postives = 130/173 (75.14%), Query Frame = 0
Query:    7 EEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVVFKEWKETDFRTGDQPWW 179
            ++ F+PDM RR  MNL+LAG++G+NV    +PY+ FFVP           A DA+G+E+  + WL TH  G R L +G+KGDATYL+VTE+  ++ YG+ AVCTHLGCVVPWNKA NKF+CPCHGSQYD TGKV+RGPAPLSLAL+HVE  DGK+VF+ W E DFRTG  PWW
Sbjct:   99 DDKFIPDMGRRKLMNLLLAGTVGLNVAAFGLPYVYFFVPPKQGGGSSSTNALDALGSEIKADQWLETHQTGDRSLVQGLKGDATYLIVTEENAIESYGLNAVCTHLGCVVPWNKAANKFICPCHGSQYDSTGKVVRGPAPLSLALAHVENDDGKIVFETWTEKDFRTGLDPWW 271          
BLAST of mRNA_Ecto-sp13_S_contig1471.3602.1 vs. uniprot
Match: Q20BN1_PANGI (Plastoquinol--plastocyanin reductase n=1 Tax=Panax ginseng TaxID=4054 RepID=Q20BN1_PANGI)

HSP 1 Score: 241 bits (615), Expect = 9.300e-79
Identity = 109/169 (64.50%), Postives = 126/169 (74.56%), Query Frame = 0
Query:   11 VPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVVFKEWKETDFRTGDQPWW 179
            VPDM++R  MNL+L G++ +   G+ VPY  FFVP        G TAKDA+GN+V    WL THG G R L EG+KGD TYLVV  DK++  YGI AVCTHLGCVVPWNKAENKFMCPCHGSQY+  GKV+RGPAPLSLAL+H +  DGKVVF  W ETDFRTG+ PWW
Sbjct:   15 VPDMEKRKLMNLLLLGALSLPSAGMLVPYANFFVPPGSGAGGGGTTAKDALGNDVIATEWLKTHGPGDRTLTEGLKGDPTYLVVEADKQLATYGINAVCTHLGCVVPWNKAENKFMCPCHGSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWTETDFRTGEDPWW 183          
BLAST of mRNA_Ecto-sp13_S_contig1471.3602.1 vs. uniprot
Match: A0A8J5X155_DIALT (Rieske domain-containing protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X155_DIALT)

HSP 1 Score: 239 bits (609), Expect = 2.350e-77
Identity = 115/177 (64.97%), Postives = 135/177 (76.27%), Query Frame = 0
Query:    3 MSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVVFKEWKETDFRTGDQPWW 179
            M++ ++ FVPDM+RR  MN +L G+  V  L LA  Y  FF P   XXXXXGVTA DA+G++VTVE WLATH  G R+L EG+KGDATYL+VT DKK++ Y + AVCTHLGCVVPWN A+ KF+CPCHGSQYD TGKV+RGPAPLSLAL+HV    GKVV   W ETDFRTG  PWW
Sbjct:   41 MAAADDGFVPDMERRVIMNALLVGATAVPGLWLAGGYAYFFAPPGSXXXXXGVTAHDALGDDVTVEKWLATHPAGDRKLVEGLKGDATYLIVTPDKKIETYALNAVCTHLGCVVPWNAAQQKFICPCHGSQYDSTGKVVRGPAPLSLALAHVNGDSGKVVLSTWTETDFRTGLAPWW 217          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1471.3602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL45_ECTSI2.500e-12298.88Plastoquinol--plastocyanin reductase n=2 Tax=Ectoc... [more]
A0A835YPA4_9STRA2.350e-9272.88Plastoquinol--plastocyanin reductase n=1 Tax=Tribo... [more]
A0A836CBH8_9STRA1.360e-9170.95Plastoquinol--plastocyanin reductase n=1 Tax=Tribo... [more]
W7TXJ0_9STRA2.480e-8867.04Plastoquinol--plastocyanin reductase n=2 Tax=Monod... [more]
A0A7S1U2M5_9STRA1.090e-8665.36Plastoquinol--plastocyanin reductase n=2 Tax=Phaeo... [more]
A0A835ZDT9_9STRA3.660e-8164.29Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
A0A2D5MSC7_9BACT1.010e-7963.74Cytochrome b6-f complex iron-sulfur subunit n=1 Ta... [more]
A0A7S2V1Z6_9STRA3.560e-7960.69Plastoquinol--plastocyanin reductase n=1 Tax=Fibro... [more]
Q20BN1_PANGI9.300e-7964.50Plastoquinol--plastocyanin reductase n=1 Tax=Panax... [more]
A0A8J5X155_DIALT2.350e-7764.97Rieske domain-containing protein n=3 Tax=Diacronem... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005805Rieske iron-sulphur protein, C-terminalPRINTSPR00162RIESKEcoord: 125..137
score: 63.46
coord: 137..149
score: 59.42
coord: 104..115
score: 66.04
NoneNo IPR availableGENE3D1.20.5.700coord: 3..45
e-value: 3.1E-11
score: 44.8
NoneNo IPR availablePANTHERPTHR10134:SF5CYTOCHROME B6-F COMPLEX IRON-SULFUR SUBUNIT, CHLOROPLASTICcoord: 5..179
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..42
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..179
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 89..148
e-value: 3.0E-13
score: 49.5
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 73..163
score: 23.425
IPR014909Cytochrome b6-f complex Fe-S subunitPFAMPF08802CytB6-F_Fe-Scoord: 11..47
e-value: 6.3E-13
score: 48.5
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 46..179
e-value: 8.9E-46
score: 156.8
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 10..179
IPR014349Rieske iron-sulphur proteinPANTHERPTHR10134CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIALcoord: 5..179
IPR023960Cytochrome b6-f complex iron-sulfur subunitHAMAPMF_01335Cytb6_f_Rieskecoord: 3..179
score: 37.043

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1471contigEcto-sp13_S_contig1471:13591..16291 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1471.3602.1mRNA_Ecto-sp13_S_contig1471.3602.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1471 12807..16372 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1471.3602.1 ID=prot_Ecto-sp13_S_contig1471.3602.1|Name=mRNA_Ecto-sp13_S_contig1471.3602.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=180bp
MKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGGGG
SGGGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKV
QDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLA
LSHVEEVDGKVVFKEWKETDFRTGDQPWW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005805Rieske_Fe-S_prot_C
IPR017941Rieske_2Fe-2S
IPR014909Cyt_b6-f_cplx_Fe-S_su
IPR036922Rieske_2Fe-2S_sf
IPR014349Rieske_Fe-S_prot
IPR023960Cyt_b6_f_Rieske