mRNA_Ecto-sp13_S_contig1471.3602.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1471.3602.1
Unique NamemRNA_Ecto-sp13_S_contig1471.3602.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1471.3602.1 vs. uniprot
Match: D7FL45_ECTSI (Plastoquinol--plastocyanin reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL45_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 1.660e-124
Identity = 186/190 (97.89%), Postives = 189/190 (99.47%), Query Frame = 1 
Query:   49 KPTASRVTSKAMKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVVFKEWKETDFRTGDQPWW 618
            +PTASR TSKAMKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKV+FKEWKETDFRTGD+PWW
Sbjct:   35 RPTASRATSKAMKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVIFKEWKETDFRTGDKPWW 224
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BLAST of mRNA_Ecto-sp13_S_contig1471.3602.1 vs. uniprot
Match: A0A836CBH8_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBH8_9STRA)

HSP 1 Score: 279 bits (714), Expect = 6.970e-89
Identity = 132/190 (69.47%), Postives = 151/190 (79.47%), Query Frame = 1 
Query:   49 KPTASRVTSKAMKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVVFKEWKETDFRTGDQPWW 618
            KP A    S A+KMS+ E+ FVPDM+RR AMN ILAGS GV VLGLA+PYI+FFVP        GV A+DA+G +VTVE W+ATH  GSREL EGIKGDATYL V +DK +QD+GIVAVCTHLGCVVPW +AENKF+CPCHGSQY+  GKV+RGPAPLSLALSH+E   G VVFK W ETDFRTG+ PWW
Sbjct:   34 KPVAQ--ASSAIKMSAAEDAFVPDMNRRVAMNAILAGSAGVVVLGLAIPYISFFVPKSAGGAGGGVIARDAVGQDVTVEGWVATHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNMDGKVVRGPAPLSLALSHIETDTGNVVFKPWTETDFRTGEAPWW 221
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BLAST of mRNA_Ecto-sp13_S_contig1471.3602.1 vs. uniprot
Match: A0A835YPA4_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPA4_9STRA)

HSP 1 Score: 278 bits (712), Expect = 1.390e-88
Identity = 133/193 (68.91%), Postives = 152/193 (78.76%), Query Frame = 1 
Query:   61 SRVTSKAM-------KMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVVFKEWKETDFRTGDQPWW 618
            ++V SKA+        MS+ E+ FVPDM+RR AMNLILAGS GV VLGLAVPYIAFFVP        GV A+DA+G +VTVE WL TH  GSREL EGIKGDATYL V +DK +QD+GIVAVCTHLGCVVPW +AENKF+CPCHGSQY+  GKV+RGPAPLSLALSH++   GKVVFK W ETDFRTG+ PWW
Sbjct:   29 AKVVSKAVTKSVARTSMSAAEDAFVPDMNRRVAMNLILAGSAGVVVLGLAVPYIAFFVPKSAGNAGGGVIARDAVGQDVTVEGWLGTHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNADGKVVRGPAPLSLALSHIDTESGKVVFKPWTETDFRTGEAPWW 221
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BLAST of mRNA_Ecto-sp13_S_contig1471.3602.1 vs. uniprot
Match: W7TXJ0_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXJ0_9STRA)

HSP 1 Score: 269 bits (687), Expect = 1.330e-84
Identity = 122/187 (65.24%), Postives = 148/187 (79.14%), Query Frame = 1 
Query:   58 ASRVTSKAMKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVVFKEWKETDFRTGDQPWW 618
            + R+ +K M  +  EE FVPDMDRR  MN IL GS+G+NV GLAVPYIAFFVP        G+ AKDA+G++VTV+ WL+TH  G R L +G+KGDATYL+V EDK +++YG+ AVCTHLGCVVPWNKAE+KF+CPCHGSQYD+TGKV+RGPAPLSLAL+HV+E DGKV+   W ETDFRT   PWW
Sbjct:   51 SGRIVTK-MAEAVGEEPFVPDMDRRKLMNTILLGSVGLNVAGLAVPYIAFFVPRTGGGAGGGLAAKDALGDDVTVQGWLSTHQAGDRSLVQGLKGDATYLIVKEDKTIENYGLNAVCTHLGCVVPWNKAESKFICPCHGSQYDKTGKVVRGPAPLSLALAHVKESDGKVLLTPWTETDFRTDTAPWW 236
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BLAST of mRNA_Ecto-sp13_S_contig1471.3602.1 vs. uniprot
Match: A0A7S1U2M5_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2M5_9STRA)

HSP 1 Score: 269 bits (687), Expect = 1.020e-83
Identity = 119/185 (64.32%), Postives = 144/185 (77.84%), Query Frame = 1 
Query:   64 RVTSKAMKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVVFKEWKETDFRTGDQPWW 618
            R   +AM M+++E+ FVPDMDRR  MN IL  S+GV  LG+AVPYI+FFVP        G  AKDA+GN+VT   WL TH  G+REL +G+KGDATYL+V +DK +++YG+ AVCTHLGCVVPWN A+ KFMCPCHGSQY++ GKV+RGPAPLSLAL+HVE  DGKVVF  W ETDFRTG+ PWW
Sbjct:  114 RAGRRAMTMAASEDAFVPDMDRRNVMNAILTASVGVAGLGMAVPYISFFVPAGSGGGGSGTIAKDALGNDVTESGWLGTHNAGARELVQGLKGDATYLIVNDDKTLENYGLSAVCTHLGCVVPWNAAQGKFMCPCHGSQYNKEGKVVRGPAPLSLALAHVENKDGKVVFTPWTETDFRTGEAPWW 298
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BLAST of mRNA_Ecto-sp13_S_contig1471.3602.1 vs. uniprot
Match: A0A835ZDT9_9STRA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT9_9STRA)

HSP 1 Score: 251 bits (640), Expect = 5.560e-78
Identity = 119/189 (62.96%), Postives = 140/189 (74.07%), Query Frame = 1 
Query:   67 VTSKAMKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXG-VTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTED----KKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVVFKEWKETDFRTGDQPWW 618
            VT     MS+ +E +VPDM RR A+NLIL    GV VLGLA+PY+A FVP        G V A+DA+G EVT E WLATH  GSREL EG+KGDATYL+V +D    K ++D GIVAVCTH+GCVVPWN AENKF+CPCH SQYD  G+V+RGPAPLSLALSHV+   GKV+ + W ETDFRTG+ PWW
Sbjct:   19 VTRSTTAMSAADEAYVPDMGRRQALNLILVSFTGVTVLGLAIPYVALFVPKHAEGGRSGSVVARDALGQEVTSEGWLATHLPGSRELVEGMKGDATYLIVDKDELHGKAIRDLGIVAVCTHMGCVVPWNAAENKFICPCHASQYDANGRVVRGPAPLSLALSHVDTGSGKVLLRPWTETDFRTGEAPWW 207
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BLAST of mRNA_Ecto-sp13_S_contig1471.3602.1 vs. uniprot
Match: A0A2D5MSC7_9BACT (Cytochrome b6-f complex iron-sulfur subunit n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2D5MSC7_9BACT)

HSP 1 Score: 244 bits (623), Expect = 1.150e-75
Identity = 109/171 (63.74%), Postives = 133/171 (77.78%), Query Frame = 1 
Query:  109 FVPDMDRRTAMNLILA-GSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVVFKEWKETDFRTGDQPWW 618
            FVPDM+RR  MNLIL  G +  +V GLA+PY+ FF+P        G+ A    G+ +T ESWL+TH  GSREL +G+KGDATYLVV EDKK++DYGI AVCTHLGCVVPWNK+ NKFMCPCHGSQYD++GKV+RGPAPLSLAL+H+ + +G + F +W ETDFRTG  PWW
Sbjct:   20 FVPDMERRNIMNLILVFGGLVPSVGGLAIPYVLFFIPRTSGKSEAGIPALTKSGDTITYESWLSTHASGSRELVQGLKGDATYLVVDEDKKIRDYGINAVCTHLGCVVPWNKSANKFMCPCHGSQYDESGKVVRGPAPLSLALAHITDTNGVLTFSQWTETDFRTGLNPWW 190
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BLAST of mRNA_Ecto-sp13_S_contig1471.3602.1 vs. uniprot
Match: A0A7S2V1Z6_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Z6_9STRA)

HSP 1 Score: 246 bits (627), Expect = 4.150e-75
Identity = 105/173 (60.69%), Postives = 130/173 (75.14%), Query Frame = 1 
Query:  100 EEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVVFKEWKETDFRTGDQPWW 618
            ++ F+PDM RR  MNL+LAG++G+NV    +PY+ FFVP           A DA+G+E+  + WL TH  G R L +G+KGDATYL+VTE+  ++ YG+ AVCTHLGCVVPWNKA NKF+CPCHGSQYD TGKV+RGPAPLSLAL+HVE  DGK+VF+ W E DFRTG  PWW
Sbjct:   99 DDKFIPDMGRRKLMNLLLAGTVGLNVAAFGLPYVYFFVPPKQGGGSSSTNALDALGSEIKADQWLETHQTGDRSLVQGLKGDATYLIVTEENAIESYGLNAVCTHLGCVVPWNKAANKFICPCHGSQYDSTGKVVRGPAPLSLALAHVENDDGKIVFETWTEKDFRTGLDPWW 271
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BLAST of mRNA_Ecto-sp13_S_contig1471.3602.1 vs. uniprot
Match: Q20BN1_PANGI (Plastoquinol--plastocyanin reductase n=1 Tax=Panax ginseng TaxID=4054 RepID=Q20BN1_PANGI)

HSP 1 Score: 242 bits (617), Expect = 7.250e-75
Identity = 112/185 (60.54%), Postives = 134/185 (72.43%), Query Frame = 1 
Query:   64 RVTSKAMKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVVFKEWKETDFRTGDQPWW 618
            +VT +A  + ++    VPDM++R  MNL+L G++ +   G+ VPY  FFVP        G TAKDA+GN+V    WL THG G R L EG+KGD TYLVV  DK++  YGI AVCTHLGCVVPWNKAENKFMCPCHGSQY+  GKV+RGPAPLSLAL+H +  DGKVVF  W ETDFRTG+ PWW
Sbjct:    2 KVTCQASSIPADR---VPDMEKRKLMNLLLLGALSLPSAGMLVPYANFFVPPGSGAGGGGTTAKDALGNDVIATEWLKTHGPGDRTLTEGLKGDPTYLVVEADKQLATYGINAVCTHLGCVVPWNKAENKFMCPCHGSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWTETDFRTGEDPWW 183
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BLAST of mRNA_Ecto-sp13_S_contig1471.3602.1 vs. uniprot
Match: A0A7S3NJN7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJN7_9STRA)

HSP 1 Score: 241 bits (616), Expect = 2.780e-74
Identity = 113/189 (59.79%), Postives = 135/189 (71.43%), Query Frame = 1 
Query:   55 TASRVTSKAMKMSSNEEVFVPDMDRRTAMNLILA-GSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVVFKEWKETDFRTGDQPWW 618
            +  R+T+ A      E  FV DM+RR  MNLIL  G +   V GL +PYI FF+P        GV A    G+ VT E WL++H VG REL +G+KGDATYL+V E K ++DYGI AVCTHLGCVVPWNKA NK+MCPCHGSQYDQTGKV+RGPAPLSLAL+H+   DGK++F  W ETDFRTG +PWW
Sbjct:   25 SVQRMTTTARPALLEEGTFVADMERRNIMNLILLFGGVLPAVGGLGIPYILFFIPRGTGGGGAGVPALTKAGDPVTAEGWLSSHNVGDRELVQGLKGDATYLIVDEGKVIRDYGINAVCTHLGCVVPWNKAANKYMCPCHGSQYDQTGKVVRGPAPLSLALAHLNNEDGKLLFSTWTETDFRTGLKPWW 213
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1471.3602.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL45_ECTSI1.660e-12497.89Plastoquinol--plastocyanin reductase n=2 Tax=Ectoc... [more]
A0A836CBH8_9STRA6.970e-8969.47Plastoquinol--plastocyanin reductase n=1 Tax=Tribo... [more]
A0A835YPA4_9STRA1.390e-8868.91Plastoquinol--plastocyanin reductase n=1 Tax=Tribo... [more]
W7TXJ0_9STRA1.330e-8465.24Plastoquinol--plastocyanin reductase n=2 Tax=Monod... [more]
A0A7S1U2M5_9STRA1.020e-8364.32Plastoquinol--plastocyanin reductase n=2 Tax=Phaeo... [more]
A0A835ZDT9_9STRA5.560e-7862.96Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
A0A2D5MSC7_9BACT1.150e-7563.74Cytochrome b6-f complex iron-sulfur subunit n=1 Ta... [more]
A0A7S2V1Z6_9STRA4.150e-7560.69Plastoquinol--plastocyanin reductase n=1 Tax=Fibro... [more]
Q20BN1_PANGI7.250e-7560.54Plastoquinol--plastocyanin reductase n=1 Tax=Panax... [more]
A0A7S3NJN7_9STRA2.780e-7459.79Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1471contigEcto-sp13_S_contig1471:12807..16372 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score350.1
Seed ortholog evalue6e-94
Seed eggNOG ortholog2880.D7FL45
Preferred namePETC
Model size1405
KEGG rclassRC01002
KEGG koko:K02636
KEGG ReactionR03817,R08409
KEGG Pathwayko00195,ko01100,map00195,map01100
KEGG ModuleM00162
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006091,GO:0006950,GO:0006952,GO:0008150,GO:0008152,GO:0009055,GO:0009314,GO:0009416,GO:0009507,GO:0009512,GO:0009526,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009767,GO:0009941,GO:0009987,GO:0010196,GO:0015979,GO:0016020,GO:0016491,GO:0019684,GO:0022900,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0032991,GO:0034357,GO:0042651,GO:0042742,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0046028,GO:0050896,GO:0051704,GO:0051707,GO:0055035,GO:0055114,GO:0070069,GO:0071944,GO:0080167,GO:0098542,GO:1990066
Exons4
EggNOG free text desc.oxidoreductase activity, acting on diphenols and related substances as donors
EggNOG OGsCOG0723@1,KOG1671@2759
Ec32 ortholog descriptionCytochrome b6-f complex iron-sulfur subunit
Ec32 orthologEc-05_006690.1
EC1.10.9.1
Cds size540
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00194,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1471.3602.1prot_Ecto-sp13_S_contig1471.3602.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1471 13591..16291 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462785.122919-UTR-Ecto-sp13_S_contig1471:12806..135901681462785.122919-UTR-Ecto-sp13_S_contig1471:12806..13590Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1471 12807..13590 -
1681462785.168197-UTR-Ecto-sp13_S_contig1471:16291..163721681462785.168197-UTR-Ecto-sp13_S_contig1471:16291..16372Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1471 16292..16372 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462785.1336026-CDS-Ecto-sp13_S_contig1471:13590..136331681462785.1336026-CDS-Ecto-sp13_S_contig1471:13590..13633Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1471 13591..13633 -
1681462785.1417272-CDS-Ecto-sp13_S_contig1471:14479..145591681462785.1417272-CDS-Ecto-sp13_S_contig1471:14479..14559Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1471 14480..14559 -
1681462785.1497955-CDS-Ecto-sp13_S_contig1471:15036..151951681462785.1497955-CDS-Ecto-sp13_S_contig1471:15036..15195Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1471 15037..15195 -
1681462785.15771-CDS-Ecto-sp13_S_contig1471:16033..162911681462785.15771-CDS-Ecto-sp13_S_contig1471:16033..16291Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1471 16034..16291 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1471.3602.1

>prot_Ecto-sp13_S_contig1471.3602.1 ID=prot_Ecto-sp13_S_contig1471.3602.1|Name=mRNA_Ecto-sp13_S_contig1471.3602.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=180bp
MKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGGGG
SGGGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKV
QDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLA
LSHVEEVDGKVVFKEWKETDFRTGDQPWW*
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mRNA from alignment at Ecto-sp13_S_contig1471:12807..16372-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1471.3602.1 ID=mRNA_Ecto-sp13_S_contig1471.3602.1|Name=mRNA_Ecto-sp13_S_contig1471.3602.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3566bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1471:12807..16372- (Ectocarpus species13 EcNAP12_S_4_19m)
TTTCATCGCCCCGCCCTTCCGCCCTTCCCCCCCTATCAAACGTCCCCGAA
GCCCACCGCCTCCAGAGTTACGTCGAAGGCCATGAAGATGTCCTCCAACG
AGGAAGTGTTCGTGCCCGACATGGACCGCCGCACTGCCATGAACCTCATC
CTCGCGGGGTCCATCGGCGTCAACGTTCTCGGGCTGGCGGTGCCGTACAT
CGCCTTCTTCGTGCCCCCCGGCGGCGGCGGCAGCGGGGGCGGTGTGACTG
CGAAGGACGCCATCGGGAACGAAGTTACCGTAGAGAGCTGGCTGGCGACC
CATGGCGTGGGGTCCCGGGAACTGGCCGAGGGAATCAAGGTGTGTTCAAG
GGGTTGTGCCTTGGACTTGCTCAGGCGATTGGAGAACCTGTCCGTGCATG
TAGTTGCACTCCTCCGTCTCGGTGGTTGTTGGTCTCAAGCTGTGGGCATT
ACTAAGTGTTTGCCGCTTGGTAGGCTTGGAGGGAATAGTTGTCGGTTTTC
GTTGCCCGGGGCGGTGATCGCTCCCTCCGGCAAGAACAAGATCGTGAGCG
CGTGTTGTGTCCGTTTCAGCGCAAGGTTGCACATTTTTTGGTTGGTCAGC
ACCAAGGTGTGGTAGCCTTCGAGAAAGTGAGAGAAGTGGCCGTGTGTCTG
GCCATATAGCGACAGCGCTGACGCGTGGAAATTCAGGAATGGCGCGCGAC
GTTTCCTCCACGTTTGTTGGGAAAGTGAACGCCAAGCTGTGTCACAGCCG
GGGTGTACTCTACCTTACTGAACTTCTCCGTCCTATCATGACCCTACGTA
CGTCTGGGAGGAAGCCTGCAAGGCAGGGTTGGGGGGAGCATCTGCGGCGG
TAGTCTCGGTAGAGATGAAATATGTCCACTTGTGTGTCAAGTTGTCAACA
TGCCGTGTCTCTCATTTTGTCGGCGAAGGCTTCCGTGTTGTTGTTGCATC
TCCCTGGTAGCCCACACCGCAACTGGTACTGGACAGACTCTTGTGTTGAC
TTGCTTGTGGACCCGGCGATAAACACCGGTGTGATCACCTTCCGTAGAGA
AGGAGGGAGAGGGTGACCGCGTGTTGCGATGTGTAGTAGCGTTCGTCGAC
CGGCCTATCATTCGACCACCACCATCTTTTTTTTTGTTTTCTTGTTCGAA
TCGGTACGTGTGTGCTTCCTTTCACAGGGTGACGCGACTTACCTGGTGGT
GACGGAAGACAAGAAGGTTCAGGACTACGGGATCGTGGCGGTGTGCACTC
ACTTGGGTTGCGTGGTGCCCTGGAACAAGGCGGAGAACAAGTTCATGTGC
CCGTGCCACGGCTCTCAGTACGATCAGACCGGAAAGGTGAACGATCAGAA
CACAGCGGTGCAATCTGTTTGGCGTGTAGATCGCGACAGTGTTTTATACT
GAGTTGCCACGAGAATTTCGGTCGTTGGGTGATGGATGACCGAGCAACGC
TAGCCGTTTTTTCGCGGTGTGCTCACACGGTCGTCATGGCCTTGTCTTCG
CTTTCTAGCTATATTTGAGCGCGAGTTATTCTCAAGTTGCTGGAGCTGTT
CGTTGTCCTCGTTGGCTGGTGGTGAGTACGAAGTGCTCAGTGTGCCCGTA
AAAGCTCTGGCAATTCAGGCTTGTAAAATCGCTACGACGCATGGGCCTTC
ATGTCTACCGGACTTGCGGTTCTCAAACATCATGGGAGTCCGTTCAAGCA
TCCAACAATAAACGTACACGCGCGATAGTGCTGTGGACGTGCGCATTCGC
TGACTTTCGTTGTGAAAACGTTGTCCTTTTTTTTCCTGCGGTGAAACCCT
CACGCTATGGTAGGTTATCAGGGGACCGGCACCTCTCTCCCTCGCCCTCT
CGCATGTGGAGGAGGTCGACGGCAAGGTTGTCTTCAAGGAGTGGTGAGCT
TTCTTGCCGCTTCGGAGATCGTTGTTGTTGTGTATGCACGTTCGATGTTT
GTCAAGTCCCCCTCCCTACCTCAGTATCGCTCTACTTTCTCGAGCCTCCG
AGTTTTTCGATGTGGGTTATTCATTCTGTTCAAGTTCCATGGTGTCGCGC
TGGGAATGAGTTCGTGTTCATCTTTTTAATATTCATTTACCTGGCACTGA
TGTTTTTTTTCTTCATCTGTGCACCCAGCACACGGAACGCAAGTGCTTCA
CATCTGTAAGGGGTCGTCTTTCGTATGCCGAACGTCGAAAAGACGCTCGG
GCATGGGATAAGTGTCACCGGAATGTCACGGGTATATATAGTGACGCGTT
TGATAGTCAGACACCAGTCGTGATACCGTCGTTGTTACCCGCCGGTTTCA
TGCCTTCCTGAAGCAATGCTTTGTGCCGGGTGAGACTTGAGCGGCATTTC
GATTTCTTGCACATGTCGGGACGTCCATGACAGTTTTAGGGTCCACGATG
CGACTCTAAAAACTTGTGTCCTGAGAGCGTTTTGTGTGTTCTTTACTGCA
TCTCTAATTTTGTGTCGCCGATGGTGTTATGTTCGACACACCTTCGCGGA
CAAATGCTGATGCTACGATACGAAGAGAGTGTGGACCTTGCCGGCATGGC
TTCGATGATTGGTTGCACTTGTTGTTCTTGCCCTCTCTCCTGCTGGGCCC
ACTCGTTAGAGATACCTTGTCATTCATCGTGTTTGCAATCGCTCTTGATG
GCCACATCCAACATCCATCTTTCATGCCGCGGATACTCATCCATCAACCC
CCGTCCCGTCCCGTTCATTTCCGTTTCTTGCTTTACCAGGAAGGAGACGG
ACTTCCGCACCGGCGACCAGCCGTGGTGGTAGACCAGCTTTTTCTGCATG
GTTGTTTTGATTCGAAAAGTATGATGACACTGGCCTAAGCACGATGTTGT
AGCCGTTTGAGCTGTTGCGAGAGCCGCAGTATCCGGCAGGGGTGACCACG
TTATTGGCAGCACTAATGCCACTGATGGACAGTTTGTGGACGATTTGTGT
GCGGTACTACAACTCGACATGGTCTCGATGGAATCAATCGATGCGTCCCC
AGCCCGATGGGCCTAGGAGAACACGGCACACCGTTCTGTCGGCGATAGTC
GAGGAGCCTGTTACTCTCAGGAGGCGTGTTTGCTGCGAGCGGCGTGGTGT
CTTCTTTGGTAGGTGCGGCCTCAGCCGTGCGACTTGTTCGAATGGTGACT
TTAATTGGGCTTGCCTTTGCTTTTGAGTACATTGCAAGCGGTTTTGGTCC
CAATTTGTTGGGCGGATAGAGTAAAGCATTTCTTGGGGTCTAGAACGTAT
TTTTTTGGCGCTTGAGCGTTTAGAGAGGAAAGGCTTTTTATGAAGATTTT
TGGCCGCCGCGGAGGTTTGCAACACACAATCCTAAGTGGTCGTCCGGGAA
TGCGAATTAGAACATCTGCCAGTTCGAGTGAGCACACTACGGCCCAATTA
AAACTCCATCCGATTTGCTTGCGAGATGGGGCATGTGGGCAGGGCCGGCT
CGAAGAGATCAAATCACAAGAATAACTTTTGTCGACTGAACGCTGCCAGT
TACTGGTTTTAGGAGTTAGCACGACCCATTTGGTCGTGGTGGACGACTTT
TCCTGGCCAATGAGAT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1471:12807..16372-

>mRNA_Ecto-sp13_S_contig1471.3602.1 ID=mRNA_Ecto-sp13_S_contig1471.3602.1|Name=mRNA_Ecto-sp13_S_contig1471.3602.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=540bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1471:12807..16372- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGATGTCCTCCAACGAGGAAGTGTTCGTGCCCGACATGGACCGCCG
CACTGCCATGAACCTCATCCTCGCGGGGTCCATCGGCGTCAACGTTCTCG
GGCTGGCGGTGCCGTACATCGCCTTCTTCGTGCCCCCCGGCGGCGGCGGC
AGCGGGGGCGGTGTGACTGCGAAGGACGCCATCGGGAACGAAGTTACCGT
AGAGAGCTGGCTGGCGACCCATGGCGTGGGGTCCCGGGAACTGGCCGAGG
GAATCAAGGGTGACGCGACTTACCTGGTGGTGACGGAAGACAAGAAGGTT
CAGGACTACGGGATCGTGGCGGTGTGCACTCACTTGGGTTGCGTGGTGCC
CTGGAACAAGGCGGAGAACAAGTTCATGTGCCCGTGCCACGGCTCTCAGT
ACGATCAGACCGGAAAGGTTATCAGGGGACCGGCACCTCTCTCCCTCGCC
CTCTCGCATGTGGAGGAGGTCGACGGCAAGGTTGTCTTCAAGGAGTGGAA
GGAGACGGACTTCCGCACCGGCGACCAGCCGTGGTGGTAG
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