prot_Ecto-sp13_S_contig1469.3585.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1469.3585.1
Unique Nameprot_Ecto-sp13_S_contig1469.3585.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length61
Homology
BLAST of mRNA_Ecto-sp13_S_contig1469.3585.1 vs. uniprot
Match: D8LN44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN44_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 6.030e-19
Identity = 39/43 (90.70%), Postives = 42/43 (97.67%), Query Frame = 0
Query:    3 VWDDALGYLLGPAVFAYEQERVSGASFGGDDFQDAIQGAVPDR 45
            VWDDALGYLLGPAVFAYEQER+ GASFGGD+FQDA+QGAVPDR
Sbjct:  530 VWDDALGYLLGPAVFAYEQERLCGASFGGDNFQDAVQGAVPDR 572          
BLAST of mRNA_Ecto-sp13_S_contig1469.3585.1 vs. uniprot
Match: A0A8C4SXH6_ERPCA (Centrosomal protein of 76 kDa n=4 Tax=Polypteridae TaxID=8289 RepID=A0A8C4SXH6_ERPCA)

HSP 1 Score: 67.4 bits (163), Expect = 1.260e-11
Identity = 31/51 (60.78%), Postives = 37/51 (72.55%), Query Frame = 0
Query:    1 SKVWDDALGYLLGPAVFAYEQERVSGASFGGDDFQDAIQGAVPDRQAGHNY 51
            S VWDD L YLL PA+FAYE ER+SG S G ++FQDAI+  VPD   GH +
Sbjct:  510 STVWDDNLSYLLSPALFAYEMERISGVSSGNEEFQDAIRKVVPD---GHTF 557          
BLAST of mRNA_Ecto-sp13_S_contig1469.3585.1 vs. uniprot
Match: A0A7S2D6A4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D6A4_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 3.930e-10
Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 0
Query:    3 VWDDALGYLLGPAVFAYEQERVSGASFGGDDFQDAIQGAVPDRQAGHNY 51
            +WDD L Y L PA+ AYE +RV+G+SFG DDFQD I+ +VPD   GH +
Sbjct:  568 IWDDDLSYYLKPALSAYEADRVTGSSFGNDDFQDVIKRSVPD---GHQF 613          
BLAST of mRNA_Ecto-sp13_S_contig1469.3585.1 vs. uniprot
Match: UPI0008550536 (centrosomal protein of 76 kDa isoform X2 n=2 Tax=Nanorana parkeri TaxID=125878 RepID=UPI0008550536)

HSP 1 Score: 62.0 bits (149), Expect = 1.000e-9
Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    3 VWDDALGYLLGPAVFAYEQERVSGASFGGDDFQDAIQGAVPDRQAGHNY 51
            VW+D L YLL PA+ AYE ER +G S G ++FQDAIQ AVPD   GH +
Sbjct:  549 VWEDQLSYLLSPALAAYEMERCTGISAGNEEFQDAIQRAVPD---GHTF 594          
BLAST of mRNA_Ecto-sp13_S_contig1469.3585.1 vs. uniprot
Match: A0A8J5XJ55_DIALT (CEP76-C2 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJ55_DIALT)

HSP 1 Score: 52.0 bits (123), Expect = 3.430e-6
Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 0
Query:    4 WDDALGYLLGPAVFAYEQERVSGASFGGDDFQDAIQGAVPD 44
            WDD L   L PA+ AYE ERVSGA++G ++FQ AI+  VP+
Sbjct:  546 WDDRLSAYLTPALAAYELERVSGAAYGNEEFQQAIKRHVPE 586          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1469.3585.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LN44_ECTSI6.030e-1990.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8C4SXH6_ERPCA1.260e-1160.78Centrosomal protein of 76 kDa n=4 Tax=Polypteridae... [more]
A0A7S2D6A4_9STRA3.930e-1057.14Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
UPI00085505361.000e-959.18centrosomal protein of 76 kDa isoform X2 n=2 Tax=N... [more]
A0A8J5XJ55_DIALT3.430e-656.10CEP76-C2 domain-containing protein n=1 Tax=Diacron... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1469contigEcto-sp13_S_contig1469:326..508 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1469.3585.1mRNA_Ecto-sp13_S_contig1469.3585.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1469 326..508 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1469.3585.1 ID=prot_Ecto-sp13_S_contig1469.3585.1|Name=mRNA_Ecto-sp13_S_contig1469.3585.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=61bp
SKVWDDALGYLLGPAVFAYEQERVSGASFGGDDFQDAIQGAVPDRQAGHN
YAYKTILTLF*
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