prot_Ecto-sp13_S_contig14685.3584.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14685.3584.1
Unique Nameprot_Ecto-sp13_S_contig14685.3584.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length390
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14685.3584.1 vs. uniprot
Match: A0A6H5JE59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE59_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.120e-13
Identity = 40/45 (88.89%), Postives = 42/45 (93.33%), Query Frame = 0 
Query:    1 VSHQVVSRDGDGTYTVRFKSPTKVPGAIGARMKESGVSESDMREV 45
            V  QVVSRDGDGT+TVRF+SPTKVPGA GARMKESGVSESDMREV
Sbjct:  347 VPAQVVSRDGDGTFTVRFRSPTKVPGATGARMKESGVSESDMREV 391
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BLAST of mRNA_Ecto-sp13_S_contig14685.3584.1 vs. uniprot
Match: D7FKD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD6_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 6.190e-13
Identity = 40/45 (88.89%), Postives = 41/45 (91.11%), Query Frame = 0 
Query:    1 VSHQVVSRDGDGTYTVRFKSPTKVPGAIGARMKESGVSESDMREV 45
            V  QVVSRDGDGTYTVRFKSPTKVPGA GA MK+SGVSESDMREV
Sbjct:  605 VPAQVVSRDGDGTYTVRFKSPTKVPGATGACMKQSGVSESDMREV 649
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14685.3584.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JE59_9PHAE1.120e-1388.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKD6_ECTSI6.190e-1388.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14685contigEcto-sp13_S_contig14685:46..2882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14685.3584.1mRNA_Ecto-sp13_S_contig14685.3584.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14685 46..2882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14685.3584.1 ID=prot_Ecto-sp13_S_contig14685.3584.1|Name=mRNA_Ecto-sp13_S_contig14685.3584.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=390bp
VSHQVVSRDGDGTYTVRFKSPTKVPGAIGARMKESGVSESDMREVISQAP
PPRKTPKTGGWLSSLGTWRGGEQSNEKKGKTGVSILGRLRRLFVRDRGDR
DVSRTTKAKRSSRKKSASSARRPREARTRRRRSESPDSDSSSSGRSSAYA
TEPERTPRRLSPTSAAGSQPRQDHHGRRRPSRDRQSGGSSPPSAGSGSGG
DGVFWSDEEEQPAGGGDRGWGVARSPSRSRSPSRSRSPVQSPPSPVPYSS
PQTRRRSRRGDSNGGGPRRIAELPVIQEGMSTPRGHILTSPRRTPSGSRK
PSSSGVRKPSNHGREARRGSGGLKSLETLERGNIEDKFDLYKKRTKNALS
PEKRGSGKVSRGRRDGRSASSSMDRRMSTAAPTASVLSP*
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