mRNA_Ecto-sp13_S_contig1466.3567.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1466.3567.1 vs. uniprot
Match: D7FLK9_ECTSI (TsaA-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLK9_ECTSI) HSP 1 Score: 757 bits (1955), Expect = 1.050e-267 Identity = 395/420 (94.05%), Postives = 402/420 (95.71%), Query Frame = 3
Query: 135 MVDGGRHSTAPAATTLVGGCSIACVLVYCAVAAGASRRRRLAELEKEIQRQVELRNAEHAGRMKAEKELRAFFTSRMVADGGLLFAPIATVHSCFTECVGTPRQGQFAPSTRALLVFDKGSVSPVSLDGVEEFSHVWVFWAFHLNTNQKDARAHAGMRPDSRGHTFPAKVSPPFLKRRVGVFSTRTPHRPNPLGVSLCKVEEVNAAERSIKLSGVDLVDGTPVFDIKPYVPDYDRPRARDGPGSGGTGDGGDGVRVAAWVEASVKHWRAVEWTPDAEVQLEEACSDRRRKGDGPQMRFFSGDHEGAKMAITESLSVDVRSIRKTREAVVAPSCVLLFDGLRVEFATTVSLSIATEASSTPASSLFGGSAAAATSAVGGLEGGPCVSPRGDDRGVTDGGRNSSPPPPVSVETIRVLSVKVD 1394
MVDGGRHSTAPAATTLVGGC+IACVLV CAV+AGA RRRRL ELEKEIQRQVELRNAEHAGRMKAEKELRAFFTSRMVADGGL+FAPIATVHSCFTECVGTPRQGQFAPSTRALLVFDKGSVSPVSLDGVEEFSHVWVFWAFHLNTNQKDARAHAGMRPDSRGHTFPAKVSPPFLKRRVGVFSTRTPHRPNPLGVSLCKVEEVNAAERSIKLSGVDLVDGTPVFDIKPYVPDYDRPRARDGP S GTGDG DGVRVAAWVEASVKH RAV+W PDAEVQLEEACSDRRRKGDGP+MRFFSGDHEGAKMAITESLSVDVRSIRKTREAVVAPSCVLLFDGLRVEFATTVSLSIAT ASSTP+SSL GGSAAAATS V G EG PCVSPRGDDR T GGRNSSPPP VSVETIRVLSV+VD
Sbjct: 1 MVDGGRHSTAPAATTLVGGCAIACVLVCCAVSAGAGRRRRLVELEKEIQRQVELRNAEHAGRMKAEKELRAFFTSRMVADGGLIFAPIATVHSCFTECVGTPRQGQFAPSTRALLVFDKGSVSPVSLDGVEEFSHVWVFWAFHLNTNQKDARAHAGMRPDSRGHTFPAKVSPPFLKRRVGVFSTRTPHRPNPLGVSLCKVEEVNAAERSIKLSGVDLVDGTPVFDIKPYVPDYDRPRARDGPVSVGTGDGDDGVRVAAWVEASVKHRRAVQWAPDAEVQLEEACSDRRRKGDGPRMRFFSGDHEGAKMAITESLSVDVRSIRKTREAVVAPSCVLLFDGLRVEFATTVSLSIATAASSTPSSSLSGGSAAAATSEVEGTEGVPCVSPRGDDREATGGGRNSSPPP-VSVETIRVLSVEVD 419
BLAST of mRNA_Ecto-sp13_S_contig1466.3567.1 vs. uniprot
Match: A0A067CDS7_SAPPC (TsaA-like domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CDS7_SAPPC) HSP 1 Score: 253 bits (646), Expect = 1.740e-73 Identity = 143/311 (45.98%), Postives = 194/311 (62.38%), Query Frame = 3
Query: 246 RRRLAELEKEIQRQVELRNAEHAGRMKAEKELRAFFTSRMVADGGLLFAPIATVHSCFTECVGTPRQGQFAPSTRALLVFDKGSVSPVSLDGVEEFSHVWVFWAFHLNTNQKDARAHAGMRPDS-RGHTFPAKVSPPFLKRRVGVFSTRTPHRPNPLGVSLCKVEEVNAAERSIKLSGVDLVDGTPVFDIKPYVPDYDRPRARDGPGSGGTGDGGDGVRVAAWVEASVKHWRAVEWTP---DAEVQLEEACSDRRRKGDGPQMRFFSGDHEGAKMAITESLSVDVRSIRKTREAVVAPSCVLLFDGLRVEF 1166
R R+ L+ E++++ R E AGR AEKELRA +++ G PIAT+ S F +C+GTPRQG AP+TRA +V S+SP +LDG+E FSHVW+ + FH NTN K+ARAHAG+R ++ HTF AKVSPP LK+R+GVF+TRTPHRPNP+G++L KVE V+ A R++ +SG+DLVDGTP+ D+KPYVP YD D V VA W+ A+V R+V W P DA + L + F++ DH AIT+ L+VDVRS+ +TR+ + L FD L V++
Sbjct: 24 RARVRLLDDEVRKKEAQRQEERAGRTSAEKELRALLQAKLDVSAGYYIQPIATLRSVFHQCIGTPRQGYLAPATRAHVVCHT-SISPEALDGLEAFSHVWITFIFHCNTNSKNARAHAGLRTEAGTAHTFRAKVSPPMLKQRMGVFATRTPHRPNPIGITLAKVERVDKAARTVVVSGIDLVDGTPIVDLKPYVPAYDCMDPTD-------------VAVAPWIAATVSTQRSVAWAPEALDALLHLSRPST------------FYAEDHARLCDAITQVLAVDVRSVEQTRKMAGRVNH-LAFDALDVQY 307
BLAST of mRNA_Ecto-sp13_S_contig1466.3567.1 vs. uniprot
Match: A0A836CCT4_9STRA (TsaA-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCT4_9STRA) HSP 1 Score: 250 bits (639), Expect = 4.010e-72 Identity = 140/338 (41.42%), Postives = 199/338 (58.88%), Query Frame = 3
Query: 213 VYCAVAAGASRRRRLAELEKEIQRQVELRNAEHAGRMKAEKELRAFFTSRMVADGGLLFAPIATVHSCFTECVGTPRQGQFAPSTRALLVFDKGSVSPVSLDGVEEFSHVWVFWAFHLNTNQKDARA---HAGMRPDSRG-----HTFPAKVSPPFLKRRVGVFSTRTPHRPNPLGVSLCKVEEVNAAERSIKLSGVDLVDGTPVFDIKPYVPDYDRPRARDGPGSGGTGDGGDGVRVAAWVEASVKHWRAVEWTPDAEVQLEEACSDRRRKGDGPQMRFFSGDHEGAKMAITESLSVDVRSIRKTREAV----------VAPSCVLLFDGLRVEFAT 1172
+ C A + +++L + +E+ + V R++EH+GR+ ++ELRA S++ D L +API T+ SCF CVGTPRQG AP TRA+L + ++SP SLDG+ +FSHVWVF+ FHLN NQ+ R G D+ TFPAKV+PPFLKR+VG+F+TR+PHRPN +G+SLC+++ V+ A +I L G+DLV GTPV DIKP+VP YD VA WVE+S++H RAV W P A+ Q+ + + + + + A AI E+L VD+RS T++A + S +LLFD L V +AT
Sbjct: 1 MLCGACAAFALQQKLRRIRRELDKAVAQRDSEHSGRLAMQRELRAVMASKLAQDDALFYAPIGTISSCFKRCVGTPRQGHLAPRTRAVLQLKRSAISPDSLDGLNKFSHVWVFFVFHLNNNQRWTRGLTGGGGTGDDAAALRKVAGTFPAKVTPPFLKRKVGLFATRSPHRPNNIGLSLCRIDRVDMAGLAIHLRGIDLVHGTPVLDIKPFVPAYDAVTP---------------AHVAPWVESSLQHNRAVLWEPGAQEQVTALAA---------ALHLYKDEPQEAIAAIAEALEVDIRSAFMTKKAAGQKGGGSIKGSSSSGILLFDTLAVHWAT 314
BLAST of mRNA_Ecto-sp13_S_contig1466.3567.1 vs. uniprot
Match: A0A1V9YMY9_9STRA (TsaA-like domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMY9_9STRA) HSP 1 Score: 249 bits (636), Expect = 6.050e-72 Identity = 152/329 (46.20%), Postives = 203/329 (61.70%), Query Frame = 3
Query: 198 IACVLVYCAVAAGASRRRRL-AEL-EKEIQRQVELRNAEHAGRMKAEKELRAFFTSRMVADGGLLFAPIATVHSCFTECVGTPRQGQFAPSTRALLVFDKGSVSPVSLDGVEEFSHVWVFWAFHLNTNQKDARAHAGMRPD-SRGHTFPAKVSPPFLKRRVGVFSTRTPHRPNPLGVSLCKVEEVNAAERSIKLSGVDLVDGTPVFDIKPYVPDYDRPRARDGPGSGGTGDGGDGVRVAAWVEASVKHWRAVEWTPDAEVQLEEACSDRRRKGDGPQMRFFSGDHEGAKMAITESLSVDVRSI---RKTREAVVAPSCVLLFDGLRVEF 1166
+A +V C GA R R L AE+ +KE QRQ E AGR AEKELRA +++ G PIAT+ S F +C+GTPRQG APSTRA +V +VSP +LDG+E FSHVW+ + FH NTN K+ARAHAG+R + + HTF AKVSPP LK+R+G+F+TRTPHRPNP+G++L ++E V+ ++ +SG+DLVDGTPV D+KPYVP YD D V VA+W+ A+V R+V WT A + + ++ RR RF+ D G + AITE L+VDVRS +K R+ V L +D L V++
Sbjct: 6 VAAAIVVC----GAMRIRTLTAEVAKKEAQRQEE-----RAGRTSAEKELRALLKAKLDVSSGYYVQPIATLQSVFAQCIGTPRQGYLAPSTRAAVVCHS-NVSPETLDGLEAFSHVWITFVFHTNTNGKNARAHAGLRTEGATAHTFRAKVSPPMLKKRLGIFATRTPHRPNPIGITLARIESVDKQRCTVFVSGIDLVDGTPVLDLKPYVPAYDCVPTAD-------------VAVASWIAATVATQRSVMWTDQA---IADITANARRT------RFYKDDAPGLRQAITEVLAVDVRSADQAKKQRQGVSH----LRYDRLNVQY 298
BLAST of mRNA_Ecto-sp13_S_contig1466.3567.1 vs. uniprot
Match: T0RI72_SAPDV (TsaA-like domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RI72_SAPDV) HSP 1 Score: 247 bits (631), Expect = 2.620e-71 Identity = 142/330 (43.03%), Postives = 197/330 (59.70%), Query Frame = 3
Query: 180 LVGGCSIACVLVYCAVAAGASRRRRLAELEKEIQRQVELRNAEHAGRMKAEKELRAFFTSRMVADGGLLFAPIATVHSCFTECVGTPRQGQFAPSTRALLVFDKGSVSPVSLDGVEEFSHVWVFWAFHLNTNQKDARAHAGMRPDS-RGHTFPAKVSPPFLKRRVGVFSTRTPHRPNPLGVSLCKVEEVNAAERSIKLSGVDLVDGTPVFDIKPYVPDYDRPRARDGPGSGGTGDGGDGVRVAAWVEASVKHWRAVEWTPDAEVQLEEACSDRRRKGDGPQMRFFSGDHEGAKMAITESLSVDVRSIRKTREAVVAPSCVLLFDGLRVEF 1166
LVGG S++ ++ R R+ L E ++ R E AGR AEKELRA +++ G PIAT+ S F +C+GTPRQG AP+T A + K S+SP +LDG+E FSHVW+ + FH NTN K+ARAH G+R ++ HTF AKVSPP LK+R+G+F+TRTPHRPNP+G++L K+E V+ A R++ +SG+DLVDGTP+ D+KPYVP YD D V VA W+ A+V R+V W P+A+ + RF++ D AIT+ L+VDVRS+ +TR+ + L FD L V++
Sbjct: 10 LVGGVSVSYYIIQL--------RARMRLLHDEAAKKETQRQEERAGRTSAEKELRALLQAKLDVSAGYYIQPIATLRSVFHQCIGTPRQGYLAPATCAHVECHK-SISPEALDGLEAFSHVWLTFVFHCNTNGKNARAHTGLRTEAGTAHTFRAKVSPPMLKQRMGIFATRTPHRPNPIGITLAKIERVDKAARTVVVSGIDLVDGTPIVDLKPYVPAYDCMEPTD-------------VAVAPWIAATVSTQRSVAWVPEAKATVLRLSR---------PSRFYANDTARLCDAITQVLAVDVRSVEQTRKMASRVNH-LAFDDLDVQY 307
BLAST of mRNA_Ecto-sp13_S_contig1466.3567.1 vs. uniprot
Match: A0A8K1CSJ8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSJ8_PYTOL) HSP 1 Score: 241 bits (615), Expect = 1.010e-68 Identity = 135/289 (46.71%), Postives = 176/289 (60.90%), Query Frame = 3
Query: 246 RRRLAELEKEIQRQVELRNAEHAGRMKAEKELRAFFTSRMVADGGLLFAPIATVHSCFTECVGTPRQGQFAPSTRALLVFDKGSVSPVSLDGVEEFSHVWVFWAFHLNTNQKDARAHAGMRPDSRGHTFPAKVSPPFLKRRVGVFSTRTPHRPNPLGVSLCKVEEVNAAERSIKLSGVDLVDGTPVFDIKPYVPDYDRPRARDGPGSGGTGDGGDGVRVAAWVEASVKHW-RAVEWT-PDAEVQLEEACSDRRRKGDGPQMRFFSGDHEGAKMAITESLSVDVRSIRKT 1106
++R AELE E+ R+ +R E GR+ AEKELR ++ G + VHSCF C+GTPRQG FAPSTR L+ F + +VSP +L G+E F+H+W+ + FH NTN K+ARAH G+R DS +TF AK++PP LK RVG+FSTR+PHRPNP+G++L K+E V+ A R++ LSG+DLVDGTPV DIKPYVP YD D R A+WV + V WT PD LE C++ R + GD + AI E L VDVRS +T
Sbjct: 43 KQRAAELENEVARKEGMRVEERRGRVSAEKELRRVMDEKLDTSNGHYVQALGHVHSCFKSCLGTPRQGLFAPSTRGLVTFHR-NVSPDTLIGLEAFTHLWIVFVFHKNTNGKNARAHQGLRSDSHRYTFKAKIAPPKLKERVGIFSTRSPHRPNPIGITLAKIESVDCATRTVHLSGLDLVDGTPVLDIKPYVPAYDA--VLD-------------ARAASWVSLDLSPTINQVRWTSPDTRAVLE-CCAETSR--------LYRGDAAALQAAIEEVLQVDVRSKEQT 306
BLAST of mRNA_Ecto-sp13_S_contig1466.3567.1 vs. uniprot
Match: A0A024TC49_9STRA (TsaA-like domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TC49_9STRA) HSP 1 Score: 240 bits (612), Expect = 1.730e-68 Identity = 133/297 (44.78%), Postives = 187/297 (62.96%), Query Frame = 3
Query: 276 IQRQVELRNAEHAGRMKAEKELRAFFTSRMVADGGLLFAPIATVHSCFTECVGTPRQGQFAPSTRALLVFDKGSVSPVSLDGVEEFSHVWVFWAFHLNTNQKDARAHAGMRPDSRGHTFPAKVSPPFLKRRVGVFSTRTPHRPNPLGVSLCKVEEVNAAERSIKLSGVDLVDGTPVFDIKPYVPDYDRPRARDGPGSGGTGDGGDGVRVAAWVEASVKHWRAVEWTPDAEVQLEEACSDRRRKGDGPQMRFFSGDHEGAKMAITESLSVDVRSIRKTREAVVAPSCVLLFDGLRVEF 1166
++++ R E GR AEKELRA +++ G PIATV SCF +C+GTPRQG APSTR + F + ++SP ++DG+ EFSH+W+ + FH NTN K+ARAH G+ HTF AK+SPP LK+R+GVF+TRTPHRPNP+G++L K+E+V+ A RSI +S +DLVDGTPV D+KPYVP YD PGS V W++ASV+ AV + D E + + C+ G + F++G+ + AI + L+VDVRS +T + + LLFD ++VE+
Sbjct: 38 LEKKEAARLEERVGRTAAEKELRAVLEAKLDVSAGYYVQPIATVQSCFVQCLGTPRQGLLAPSTRGRIQFHR-NISPDAMDGLSEFSHIWITFVFHANTNGKNARAHDGLLSSRTSHTFRAKISPPMLKQRIGVFATRTPHRPNPIGITLAKIEKVDLATRSILVSALDLVDGTPVLDLKPYVPMYDSL-----PGS----------TVPDWIQASVQSQSAVRFDSDKEDAMRQCCA-------GHSV-FYAGEPDVMLEAIAQVLAVDVRSQVQTAKMHTKVNK-LLFDTVQVEY 309
BLAST of mRNA_Ecto-sp13_S_contig1466.3567.1 vs. uniprot
Match: A0A6G0XJI2_9STRA (TsaA-like domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJI2_9STRA) HSP 1 Score: 237 bits (605), Expect = 1.570e-67 Identity = 129/291 (44.33%), Postives = 180/291 (61.86%), Query Frame = 3
Query: 297 RNAEHAGRMKAEKELRAFFTSRMVADGGLLFAPIATVHSCFTECVGTPRQGQFAPSTRALLVFDKGSVSPVSLDGVEEFSHVWVFWAFHLNTNQKDARAHAGMRPDSRGHTFPAKVSPPFLKRRVGVFSTRTPHRPNPLGVSLCKVEEVNAAERSIKLSGVDLVDGTPVFDIKPYVPDYDR-PRARDGPGSGGTGDGGDGVRVAAWVEASVKHWRAVEWTPDAEVQLEEACSDRRRKGDGPQMRFFSGDHEGAKMAITESLSVDVRSIRKTREAVVAPSCVLLFDGLRVEF 1166
R E GR AEKELR +++ G PI V SCF++C+GTPRQG AP TRA +VF++ S+SP +LDG+ F HVW+ + FH NTN K+ARAH G+RPDS GHTF AK+SPP LK+RVGVF+TRTPHRPNP+G++L K+++V+ R++ +S +DLV+GTPV DIKPYVP YD P++ V AW+ + +V + + Q+E C RK +F+ + + + AI E L+VDVRS +T + + + L+FD VE+
Sbjct: 48 RQEERVGRTSAEKELRFVLAAKLNVSAGYYVQPIGAVESCFSQCLGTPRQGLLAPHTRARIVFNR-SISPEALDGLNAFGHVWITFVFHCNTNGKNARAHEGLRPDSHGHTFKAKISPPMLKKRVGVFATRTPHRPNPIGIALAKIDKVDG--RTLWISAIDLVEGTPVLDIKPYVPKYDSLPQSA----------------VPAWIAETYGTQSSVRFAEECAAQIETCC----RKS-----KFYKDEPDNLRSAIEEVLAVDVRSQMQTAKMQKSTNR-LVFDTACVEY 309
BLAST of mRNA_Ecto-sp13_S_contig1466.3567.1 vs. uniprot
Match: A0A485KDZ9_9STRA (Aste57867_5231 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDZ9_9STRA) HSP 1 Score: 237 bits (604), Expect = 2.310e-67 Identity = 133/312 (42.63%), Postives = 185/312 (59.29%), Query Frame = 3
Query: 255 LAELEKEIQRQVELRNAEHAGRMKAEKELRAFFTSRMVADGGLLFAPIATVHSCFTECVGTPRQGQFAPSTRALLVFDKGSVSPVSLDGVEEFSHVWVFWAFHLNTNQKDARAHAGMRPDSRGHTFPAKVSPPFLKRRVGVFSTRTPHRPNPLGVSLCKVEEVNAAERSIKLSGVDLVDGTPVFDIKPYVPDYDRPRARDGPGSGGTGDGGDGVRVAAWVEASVKHWRAVEWTPDAEVQLEEACSDRRRKGDGPQMRFFSGDHEGAKMAITESLSVDVRSIRKTREAVVAPSCVLLFDGLRVEFATTVSLSI 1190
LA E+ ++++ + R E GR AEKELR S++ G PIATV SCF++C+GTPRQG AP TR +V + ++SP +LDG+ EFSHVW+ + FH+NTN K+ARAH G+RPDS GHTF AK+SPP LK+R+G+F+TRTPHRPNP+G++L K++ V+ A +S+ +S +DLVDGTPV D+KPYVP YD D G V W++ S+ V + A QLE++ I + L+VDVRS +T + L+FD + VE+A V S+
Sbjct: 34 LARAEEALKKKEQARLEERMGRTAAEKELRVVLESKLNVSAGYYVQPIATVRSCFSQCIGTPRQGLLAPLTRGRIVCHR-NISPDTLDGLSEFSHVWITFVFHVNTNGKNARAHEGLRPDSHGHTFRAKISPPMLKKRMGIFATRTPHRPNPIGITLAKIDRVDMATKSLWISALDLVDGTPVLDLKPYVPMYDS-----------LPDAG----VPLWIQQSIGAESVVHVSAAARAQLEDS--------------------------IHQVLAVDVRSQMQTAKMTQRRVNRLMFDNVMVEYAVEVDNSL 303
BLAST of mRNA_Ecto-sp13_S_contig1466.3567.1 vs. uniprot
Match: A0A2D4C449_PYTIN (TsaA-like domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C449_PYTIN) HSP 1 Score: 233 bits (593), Expect = 3.200e-66 Identity = 134/307 (43.65%), Postives = 182/307 (59.28%), Query Frame = 3
Query: 273 EIQRQVELRNAEHAGRMKAEKELRAFFTSRMVADGGLLFAPIATVHSCFTECVGTPRQGQFAPSTRALLVFDKGSVSPVSLDGVEEFSHVWVFWAFHLNTNQKDARAHAGMRPDSRGHTFPAKVSPPFLKRRVGVFSTRTPHRPNPLGVSLCKVEEVNAAERSIKLSGVDLVDGTPVFDIKPYVPDYDRPRARDGPGSGGTGDGGDGVRVAAWVEASVKHWRAVEWTPDAEVQLEEACSDRRRKGDGPQMRFFSGDHEGAKMAITESLSVDVRSIRKTREAVVAPSCVLLFDGLRVEFATTVSLSIA 1193
E+ ++ ++R E GR+ AEKELR ++ G + V SCFT CVGTPRQG FAP+TR +VF++ +VSP +LDG+E+FSHVW+ + FH NTN K+ARAH G+R DS +TF AK++PP LK+RVG+FSTR+PHRPNP+G++L ++E V+ A+R++ LSG+DLVDGTPV DIKPYVP YD +A V W + + +P +Q E R R + D EG AI + L VDVRS R A L+ D +RV +A T + IA
Sbjct: 8 ELAQKEKMRVEERRGRVSAEKELRLVTEEKINTTNGHFVQALGAVQSCFTSCVGTPRQGLFAPATRGRIVFNR-NVSPDTLDGLEQFSHVWIVFVFHKNTNGKNARAHEGLRSDSYRYTFKAKIAPPKLKQRVGIFSTRSPHRPNPIGITLARIERVDHAKRTVYLSGLDLVDGTPVLDIKPYVPAYD-----------------------CVPDALVASWVSSDLSPTVALQNEV------RHLASSSSRLYQDDPEGLVSAIEQVLQVDVRSRDLARRRDSASQNHLVLDVVRVTYAITSTTPIA 284 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1466.3567.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1466.3567.1 >prot_Ecto-sp13_S_contig1466.3567.1 ID=prot_Ecto-sp13_S_contig1466.3567.1|Name=mRNA_Ecto-sp13_S_contig1466.3567.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=431bp MVDGGRHSTAPAATTLVGGCSIACVLVYCAVAAGASRRRRLAELEKEIQRback to top mRNA from alignment at Ecto-sp13_S_contig1466:1880..8308+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1466.3567.1 ID=mRNA_Ecto-sp13_S_contig1466.3567.1|Name=mRNA_Ecto-sp13_S_contig1466.3567.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6429bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1466:1880..8308+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1466:1880..8308+ >mRNA_Ecto-sp13_S_contig1466.3567.1 ID=mRNA_Ecto-sp13_S_contig1466.3567.1|Name=mRNA_Ecto-sp13_S_contig1466.3567.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1293bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1466:1880..8308+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |