prot_Ecto-sp13_S_contig14624.3551.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14624.3551.1
Unique Nameprot_Ecto-sp13_S_contig14624.3551.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length243
Homology
BLAST of mRNA_Ecto-sp13_S_contig14624.3551.1 vs. uniprot
Match: D8LU94_ECTSI (Coronin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU94_ECTSI)

HSP 1 Score: 405 bits (1040), Expect = 2.070e-138
Identity = 234/236 (99.15%), Postives = 235/236 (99.58%), Query Frame = 0
Query:    1 AVLPYNKPGRFVRGGPLVSGHTASVLDFDFNPFHEQLVASCSEDCTVKVWGIPEDGFAETETEALIDLQGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMNINTLSAHEQLIQDIVWDFYGNTYATSCKDKSLRIIDARSPQVAQSVAMAHEGARSSKITYLGTKEKLVSVGFTKQSQRQFKVWDPRNLSKEIKKIEIDQAAGVILPFYDDESSLLYLAGKGDGNIRYYE 236
            AVLPYNKPGRFVRGGPLVSGHTASVLDFDFNPFHEQLVASCSEDCTVKVWGIPEDGF ETETEALIDLQGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMNINTLSAHEQLIQDIVWDFYGNTYATSCKDKSLRIIDARSPQVAQSVAMAHEGARSSKITYLGTKEKLVSVGFTKQSQRQFKVWDPRNLSKEIKK+EIDQAAGVILPFYDDESSLLYLAGKGDGNIRYYE
Sbjct:   58 AVLPYNKPGRFVRGGPLVSGHTASVLDFDFNPFHEQLVASCSEDCTVKVWGIPEDGFTETETEALIDLQGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMNINTLSAHEQLIQDIVWDFYGNTYATSCKDKSLRIIDARSPQVAQSVAMAHEGARSSKITYLGTKEKLVSVGFTKQSQRQFKVWDPRNLSKEIKKMEIDQAAGVILPFYDDESSLLYLAGKGDGNIRYYE 293          
BLAST of mRNA_Ecto-sp13_S_contig14624.3551.1 vs. uniprot
Match: A0A835YLY0_9STRA (Coronin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY0_9STRA)

HSP 1 Score: 309 bits (791), Expect = 1.220e-100
Identity = 174/235 (74.04%), Postives = 205/235 (87.23%), Query Frame = 0
Query:    2 VLPYNKPGRFVRGGPLVSGHTASVLDFDFNPFHEQLVASCSEDCTVKVWGIPEDGFAETETEALIDLQGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMNINTLSAHEQLIQDIVWDFYGNTYATSCKDKSLRIIDARSPQVAQSVAMAHEGARSSKITYLGTKEKLVSVGFTKQSQRQFKVWDPRNLSKEIKKIEIDQAAGVILPFYDDESSLLYLAGKGDGNIRYYE 236
            +LPY+KPGRF R  P+++GHT +VLDFDFNPFHEQLVASCSEDCT+K+WGIP+ G  ET TE+L+DL GH XXXXXXXXXXXXXXXXXXXXXXXXXXXXDIE    +N L  HE LIQDIVWD+ G  YAT+CKDKS+RI DAR+  V+  +  AHEGARS+K+TYLG+K+KL+SVGFT+QSQRQFK+WDPRN S EIKK++IDQAAGVI+PFYDD+++LLYLAGKGDGNIRYYE
Sbjct:   59 ILPYDKPGRFERNVPVIAGHTGAVLDFDFNPFHEQLVASCSEDCTIKIWGIPDGGVTETITESLVDLGGHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEKACEVNCLGGHEGLIQDIVWDYMGANYATTCKDKSMRICDARAATVSTVIPNAHEGARSTKLTYLGSKDKLLSVGFTRQSQRQFKIWDPRNTSAEIKKVDIDQAAGVIMPFYDDDTNLLYLAGKGDGNIRYYE 293          
BLAST of mRNA_Ecto-sp13_S_contig14624.3551.1 vs. uniprot
Match: A0A836CNW2_9STRA (Coronin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNW2_9STRA)

HSP 1 Score: 299 bits (765), Expect = 1.490e-96
Identity = 174/235 (74.04%), Postives = 203/235 (86.38%), Query Frame = 0
Query:    2 VLPYNKPGRFVRGGPLVSGHTASVLDFDFNPFHEQLVASCSEDCTVKVWGIPEDGFAETETEALIDLQGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMNINTLSAHEQLIQDIVWDFYGNTYATSCKDKSLRIIDARSPQVAQSVAMAHEGARSSKITYLGTKEKLVSVGFTKQSQRQFKVWDPRNLSKEIKKIEIDQAAGVILPFYDDESSLLYLAGKGDGNIRYYE 236
            +L Y KPGRF R  PL++GHT++VLDFDFNPF E LVASCSEDCT+KVWGIPE G  ET TE L+DL   XXXXXXXXXXXXXXXXXXXXXXXXXXXXX IE  + INTL+AH+QLIQDIVWD+ G  YAT+CKDKS+RI DAR+ +V+  +  AHEGARS+K+TYLG K+KL+SVGFT+QSQRQFK+WDPRN + EIK+I+IDQAAGVI+PFYDD++ LLYLAGKGDGNIRYYE
Sbjct:   59 ILDYTKPGRFERNVPLIAGHTSAVLDFDFNPFFENLVASCSEDCTIKVWGIPEGGLTETITEPLVDLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEKSVEINTLAAHDQLIQDIVWDYTGANYATTCKDKSVRICDARAAKVSTVIPNAHEGARSAKLTYLGAKDKLLSVGFTRQSQRQFKIWDPRNTAAEIKRIDIDQAAGVIMPFYDDDTQLLYLAGKGDGNIRYYE 293          
BLAST of mRNA_Ecto-sp13_S_contig14624.3551.1 vs. uniprot
Match: A0A7S3H1X9_9STRA (Coronin n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H1X9_9STRA)

HSP 1 Score: 268 bits (684), Expect = 1.180e-84
Identity = 160/243 (65.84%), Postives = 200/243 (82.30%), Query Frame = 0
Query:    2 VLPYNKPGRFVRGGPLVSGHTASVLDFDFNPFHEQLVASCSEDCTVKVWGIPEDGFAETETEALIDLQGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMNINTLS-AHEQLIQDIVWDFYGNTYATSCKDKSLRIIDARSPQVAQSVAMAHEGARSSKITYLGTKEKLVSVGFTKQSQRQFKVWDPRNLSKEIKKIEIDQAAGVILPFYDDESSLLYLAGKGDGNIRYYEVRPCLPY 243
            V+  +KPGR +   P++SGH+A+VLDF+FNPF++Q++A+ SED TVKVWGIPE G     T  L+DL   XXXXXXXXXXXXXXXXXXXXXXXXXXXXX    G+ IN+LS AH+QLIQDIVWD+ G  YATSCKDK++RIIDARS  V+ ++  AHEGA+S K+TY GT  KL+SVGFT+QSQRQFK+WDPRN +KE++K++IDQAAGVI+PFYD +++LLYLAGKGDGN+RYYE+    P+
Sbjct:   59 VINLDKPGRMLTDQPVISGHSAAVLDFEFNPFNDQIIATGSEDTTVKVWGIPEGGLTANITTPLVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGVEINSLSSAHDQLIQDIVWDYTGTEYATSCKDKNIRIIDARSAAVSSTIEQAHEGAKSMKLTYAGTTGKLISVGFTRQSQRQFKIWDPRNTAKELEKVDIDQAAGVIMPFYDADTNLLYLAGKGDGNVRYYEISSEAPH 301          
BLAST of mRNA_Ecto-sp13_S_contig14624.3551.1 vs. uniprot
Match: F0Y2I0_AURAN (Coronin n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2I0_AURAN)

HSP 1 Score: 258 bits (658), Expect = 1.130e-80
Identity = 149/247 (60.32%), Postives = 188/247 (76.11%), Query Frame = 0
Query:    1 AVLPYNKPGRFVRGGPLVSGHTASVLDFDFNPFHEQLVASCSEDCTVKVWGIPEDGFAETETEALIDLQGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMNINTLSAHEQLIQDIVWDFYGNTYATSCKDKSLRIIDARSPQVAQSVAMAHEGARSSKITYLGT----KEKLVSVGFTKQSQRQFKVWDPRNLSKEIKKIEIDQAAGVILPFYDDESSLLYLAGKGDGNIRYYEVRPCLPY 243
            AV+PY K G+F  G P+V+GH ++VLDFDFNPFHE ++AS SED T+KVWGIP DG  ET TE L+DL GH      XXXXXXXXXXXXXXXXXXXXXXXDIE G  ++ + AHEQLIQD+VWD+ G  +AT+CKDK +R+ D R+  VA  +  AH GA+S K+T+LG     + +  +VGFTKQSQRQ KVWD R+LSK + K+++DQAAGVI+P+YD ++ +LYL GKGDGNIRYYE+    P+
Sbjct:   58 AVVPYGKKGQFAPGTPVVAGHKSAVLDFDFNPFHEHIIASASEDSTIKVWGIPPDGLTETITEPLVDLHGHGRKVTLXXXXXXXXXXXXXXXXXXXXXXXDIEKGCEVSGMPAHEQLIQDLVWDYEGKMWATTCKDKKVRLGDPRAGAVAMELPEAHAGAKSVKMTFLGDTGRFQRRFATVGFTKQSQRQIKVWDVRDLSKMVHKVDLDQAAGVIVPYYDCDTKVLYLCGKGDGNIRYYEMSKDKPF 304          
BLAST of mRNA_Ecto-sp13_S_contig14624.3551.1 vs. uniprot
Match: A0A2D4C4E8_PYTIN (Coronin (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4E8_PYTIN)

HSP 1 Score: 258 bits (658), Expect = 1.620e-80
Identity = 152/244 (62.30%), Postives = 184/244 (75.41%), Query Frame = 0
Query:    1 AVLPYNKPGRFVRGGPLVSGHTASVLDFDFNPFHEQLVASCSEDCTVKVWGIPEDGFAETETEALIDLQGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMNINTLSAH-EQLIQDIVWDFYGNTYATSCKDKSLRIIDARSPQVAQSVAMAHEGARSSKITYLGTKEKLVSVGFTKQSQRQFKVWDPRNLSKEIKKIEIDQAAGVILPFYDDESSLLYLAGKGDGNIRYYEVRPCLPY 243
            AV+PY K G+F    PLVSGH  ++LDFDFNPFHE L+AS S+D T+K+WGIPE G +ET    L+DLQGH      XXXXXXXXXXXXXXXXXXXXXXX  E G  I ++ AH E L+QD+ W + G+   T+CKDK +R+ DARS QVA     AH G +S K+T+LG KE  V+VGFTKQSQRQFK+WDPR L KE+KK++IDQAAGVI+PFYD +++LLYL GKGDGNIRYYE+    PY
Sbjct:   58 AVVPYEKVGKFDPDFPLVSGHRGAILDFDFNPFHEHLIASASDDTTIKIWGIPEGGLSETCVXPLVDLQGHGRKVTLXXXXXXXXXXXXXXXXXXXXXXXXXEKGSEIVSMEAHGENLVQDLAWSWTGSMLGTTCKDKIVRLYDARSGQVAALKDGAHGGTKSVKMTFLGDKETFVTVGFTKQSQRQFKIWDPRKLDKELKKVDIDQAAGVIMPFYDPDTNLLYLCGKGDGNIRYYEMSEGEPY 301          
BLAST of mRNA_Ecto-sp13_S_contig14624.3551.1 vs. uniprot
Match: A0A7R9YBR7_9STRA (Coronin (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBR7_9STRA)

HSP 1 Score: 245 bits (626), Expect = 2.840e-76
Identity = 121/245 (49.39%), Postives = 165/245 (67.35%), Query Frame = 0
Query:    1 AVLPYNKPGRFVRGGPLVSGHTASVLDFDFNPFHEQLVASCSEDCTVKVWGIPEDGFAETET--EALIDLQGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMNINTLSAHEQLIQDIVWDFYGNTYATSCKDKSLRIIDARSPQVAQSVAMAHEGARSSKITYLGTKEKLVSVGFTKQSQRQFKVWDPRNLSKEIKKIEIDQAAGVILPFYDDESSLLYLAGKGDGNIRYYEVRPCLPY 243
            AV   N  GR+    P++SGH ++VLDF+F+PF+  L+AS S+D T+K+WGIP++G ++T T  +AL DL  H                             D+E    I+T +  + LIQDIVWD+ G+ YA SCKDK +RI+D R+ +   S   AHEGA+S K+TYLG K+KLV+VGFT+QSQRQFK+WDPRN S+ +K+++IDQ+AGVI+PFYD ++ LLYLAGKGDGNIRYYE+    P+
Sbjct:   59 AVCDVNSTGRYDPDAPIISGHRSAVLDFEFSPFNPNLLASASDDSTIKLWGIPDEGLSQTLTSDDALADLTAHGRKVTLLRFHPTANNVLASASADFTTKVWDVEHSSEISTFAECQALIQDIVWDYMGSNYAVSCKDKLIRIVDGRTAECTASF-QAHEGAKSCKLTYLGQKDKLVTVGFTRQSQRQFKIWDPRNTSEALKRVDIDQSAGVIMPFYDPDTCLLYLAGKGDGNIRYYEMSDENPF 302          
BLAST of mRNA_Ecto-sp13_S_contig14624.3551.1 vs. uniprot
Match: A0A024FW98_9STRA (Coronin n=2 Tax=Albugo TaxID=65356 RepID=A0A024FW98_9STRA)

HSP 1 Score: 245 bits (626), Expect = 1.100e-75
Identity = 147/244 (60.25%), Postives = 184/244 (75.41%), Query Frame = 0
Query:    1 AVLPYNKPGRFVRGGPLVSGHTASVLDFDFNPFHEQLVASCSEDCTVKVWGIPEDGFAETETEALIDLQGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMNINTLS-AHEQLIQDIVWDFYGNTYATSCKDKSLRIIDARSPQVAQSVAMAHEGARSSKITYLGTKEKLVSVGFTKQSQRQFKVWDPRNLSKEIKKIEIDQAAGVILPFYDDESSLLYLAGKGDGNIRYYEVRPCLPY 243
            AV+PY   G+     PL+SGH  ++LDFDFNPFHE L+AS SED T+K+WG+PE G  ET +E L+DL GH   XXXXXXXXXXXXXXXXXXXXXXXXXX IE    + ++    + L  DI W++ G+  ATSCKDK +R+ DARS Q+A     AH G++S KITYLG K+  VSVGFT+ SQR+FKVWDPRNLSKE+KK+++DQAAG I+PFYD +++LLYL GKGDGN+RYYE+    P+
Sbjct:   58 AVVPYECYGKIDPDFPLISGHRGAILDFDFNPFHEHLLASASEDTTIKIWGVPEGGVTETCSEPLVDLTGHGRKXXXXXXXXXXXXXXXXXXXXXXXXXXXIEKSSEVVSMQFIGDNLYHDIAWNWTGSVLATSCKDKVIRLFDARSGQLAAQKENAHNGSKSCKITYLGNKDTFVSVGFTRTSQREFKVWDPRNLSKELKKVDLDQAAGAIMPFYDPDTNLLYLCGKGDGNVRYYEMSAGEPF 301          
BLAST of mRNA_Ecto-sp13_S_contig14624.3551.1 vs. uniprot
Match: A0A067BYT2_SAPPC (Coronin n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BYT2_SAPPC)

HSP 1 Score: 242 bits (618), Expect = 1.650e-74
Identity = 140/244 (57.38%), Postives = 180/244 (73.77%), Query Frame = 0
Query:    1 AVLPYNKPGRFVRGGPLVSGHTASVLDFDFNPFHEQLVASCSEDCTVKVWGIPEDGFAETETEALIDLQGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMNINTLSAH-EQLIQDIVWDFYGNTYATSCKDKSLRIIDARSPQVAQSVAMAHEGARSSKITYLGTKEKLVSVGFTKQSQRQFKVWDPRNLSKEIKKIEIDQAAGVILPFYDDESSLLYLAGKGDGNIRYYEVRPCLPY 243
            AV+PY K G+F    PL+ GH  +++DFDFNPFHE L+AS S+D T+KVWGIPE G  ET TE L+DL GH        XXXXXXXXXXXXXXXXXXXXX       I  +  + E L+QD+ W++ G+T AT+CKDK +R+ DARS QV+     AHEG++S K+T+LG K+   +VGF++QSQR+ KVWDPR L KE+KKI+IDQAAGVI+PF+D ++++LYL GKGDGNIRYYE+    P+
Sbjct:   58 AVVPYEKVGKFDPDFPLIGGHRGAIMDFDFNPFHEHLIASASDDTTLKVWGIPEGGLTETMTEPLVDLTGHGRKVTLTYXXXXXXXXXXXXXXXXXXXXXXXXXXSQIVNMEHNTENLVQDMAWNWTGSTLATTCKDKVVRLYDARSGQVSAQKENAHEGSKSVKLTFLGEKDLFATVGFSRQSQRRLKVWDPRKLDKELKKIDIDQAAGVIMPFFDADTNILYLCGKGDGNIRYYEMNDADPF 301          
BLAST of mRNA_Ecto-sp13_S_contig14624.3551.1 vs. uniprot
Match: A0A6G0W619_9STRA (Coronin n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0W619_9STRA)

HSP 1 Score: 242 bits (618), Expect = 1.740e-74
Identity = 147/244 (60.25%), Postives = 180/244 (73.77%), Query Frame = 0
Query:    1 AVLPYNKPGRFVRGGPLVSGHTASVLDFDFNPFHEQLVASCSEDCTVKVWGIPEDGFAETETEALIDLQGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMNINTLSAH-EQLIQDIVWDFYGNTYATSCKDKSLRIIDARSPQVAQSVAMAHEGARSSKITYLGTKEKLVSVGFTKQSQRQFKVWDPRNLSKEIKKIEIDQAAGVILPFYDDESSLLYLAGKGDGNIRYYEVRPCLPY 243
            AV+PY K G+F    PLV GH  +++DFDFNPFHE L+AS S+D TVKVWGIPE G  ET TE L+DL GH      XXXXXXXXXXXXXXXXXXXXXXX    G  I     + E LIQD+ W + G+T ATS KDK +R+ DARS  V   V  AHEG++S K+++LG KE  VSVGF++QSQR+ KVWDPR L KE+K+I+IDQAAGVI+PF+D ++++LYL GKGDGNIRYYE+    P+
Sbjct:   58 AVVPYEKVGKFDPDFPLVGGHRGAIMDFDFNPFHEHLIASASDDTTVKVWGIPEGGLTETMTEPLVDLTGHGRKVTLXXXXXXXXXXXXXXXXXXXXXXXXXXKGSQIVNFDYNTENLIQDMAWSYTGSTLATSGKDKIVRLFDARSGSVTSEV-QAHEGSKSIKLSFLGEKELFVSVGFSRQSQRRLKVWDPRKLDKELKRIDIDQAAGVIMPFFDSDTNVLYLCGKGDGNIRYYEMNDAEPF 300          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14624.3551.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU94_ECTSI2.070e-13899.15Coronin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU94... [more]
A0A835YLY0_9STRA1.220e-10074.04Coronin n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
A0A836CNW2_9STRA1.490e-9674.04Coronin n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
A0A7S3H1X9_9STRA1.180e-8465.84Coronin n=1 Tax=Spumella elongata TaxID=89044 RepI... [more]
F0Y2I0_AURAN1.130e-8060.32Coronin n=1 Tax=Aureococcus anophagefferens TaxID=... [more]
A0A2D4C4E8_PYTIN1.620e-8062.30Coronin (Fragment) n=1 Tax=Pythium insidiosum TaxI... [more]
A0A7R9YBR7_9STRA2.840e-7649.39Coronin (Fragment) n=1 Tax=Pinguiococcus pyrenoido... [more]
A0A024FW98_9STRA1.100e-7560.25Coronin n=2 Tax=Albugo TaxID=65356 RepID=A0A024FW9... [more]
A0A067BYT2_SAPPC1.650e-7457.38Coronin n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A... [more]
A0A6G0W619_9STRA1.740e-7460.25Coronin n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 61..101
e-value: 2.1E-6
score: 37.3
coord: 10..51
e-value: 2.2E-4
score: 30.6
coord: 104..143
e-value: 0.034
score: 23.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 107..143
e-value: 0.044
score: 14.7
coord: 19..50
e-value: 1.3E-4
score: 22.7
coord: 67..101
e-value: 0.0037
score: 18.1
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 18..60
score: 11.077
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 68..110
score: 14.485
NoneNo IPR availableSMARTSM01167DUF1900_2coord: 198..243
e-value: 9.1E-5
score: 5.4
NoneNo IPR availablePANTHERPTHR10856:SF0CORONINcoord: 1..240
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..241
e-value: 2.5E-84
score: 285.1
IPR015505CoroninPANTHERPTHR10856CORONINcoord: 1..240
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 88..102
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 18..152
score: 24.969
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 19..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14624contigEcto-sp13_S_contig14624:2..4370 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14624.3551.1mRNA_Ecto-sp13_S_contig14624.3551.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14624 2..4370 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14624.3551.1 ID=prot_Ecto-sp13_S_contig14624.3551.1|Name=mRNA_Ecto-sp13_S_contig14624.3551.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=243bp
AVLPYNKPGRFVRGGPLVSGHTASVLDFDFNPFHEQLVASCSEDCTVKVW
GIPEDGFAETETEALIDLQGHGRKVTLLRFHPTANNVLASVSADMTVKLW
DIEAGMNINTLSAHEQLIQDIVWDFYGNTYATSCKDKSLRIIDARSPQVA
QSVAMAHEGARSSKITYLGTKEKLVSVGFTKQSQRQFKVWDPRNLSKEIK
KIEIDQAAGVILPFYDDESSLLYLAGKGDGNIRYYEVRPCLPY
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR015505Coronin
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf