mRNA_Ecto-sp13_S_contig1461.3539.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1461.3539.1 vs. uniprot
Match: A0A6H5L3M2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L3M2_9PHAE) HSP 1 Score: 442 bits (1137), Expect = 1.140e-141 Identity = 218/230 (94.78%), Postives = 223/230 (96.96%), Query Frame = 1
Query: 3184 GQEGDHPFKLEGDEMMAAQRYEDAARLYSSLLDLQPSEVRVWGNRAQAYLYLGRFEEAERDATMVLGIDPDNIKAHYRRGWARLKLRTPNVEGGKEDLARVLSQEPGNKAARDLLQNFEERVLDEDAGVALTVVEDDSEDGCSWCPVSTMPGRDEDERASLVFWRQGEQFKSSKKWHEALDCFNRAAVANPLNSKNWVSIAEVHHEQGNHRESEEASRRAACIELNQRQD 3873
GQEGDHPFKLEGDEMMAAQRYEDA RLYSSLLDLQPSE+RVWGNR+QAYLYLGRFEEAERDATMVLGIDPDNIKAHYRRGWARLKLRTPNV+GGKEDLARVLSQEPGNKAARDLLQNFEER LDEDAGVALTVVEDDSEDGCSWCPVSTMPGRDEDERASL FWR+GEQFKS+KK HEAL CFNRAAVANPLNSKNWVSIAEVH EQGNHRESEEASRRAACI LNQRQD
Sbjct: 3 GQEGDHPFKLEGDEMMAAQRYEDAVRLYSSLLDLQPSELRVWGNRSQAYLYLGRFEEAERDATMVLGIDPDNIKAHYRRGWARLKLRTPNVKGGKEDLARVLSQEPGNKAARDLLQNFEERGLDEDAGVALTVVEDDSEDGCSWCPVSTMPGRDEDERASLDFWRKGEQFKSNKKLHEALGCFNRAAVANPLNSKNWVSIAEVHREQGNHRESEEASRRAACIALNQRQD 232
BLAST of mRNA_Ecto-sp13_S_contig1461.3539.1 vs. uniprot
Match: A0A6H5L1F1_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1F1_9PHAE) HSP 1 Score: 191 bits (484), Expect = 7.850e-47 Identity = 102/166 (61.45%), Postives = 121/166 (72.89%), Query Frame = -2
Query: 1675 VFLGNPKRVNKNYIPKCLMFRDIVGGKDPGSGRPDKKWVSCLKDDFVYFGANAESTADDRRNFGLPRGCWPIAAKVEKRVPRYKGVMVGTEKFMVEWHNEQEKLGMLRGEERNKRSIGQKTKTTAE*EGKGARED---KHRKTEDTTAAEETRTEMTERIVERCVP 2163
+F G R + +PK LM DIVGGKDP SGR +K WV CLKDDFV FGANAESTA D R FG+P GCWP+ AK+EK VP +KGVM G EKFMV+WH EQE++ +LR EERNK + G+K + + +G RE K RKTEDTT AEE+RTEMTE+I ERCVP
Sbjct: 514 LFAGAVARQSDGRLPKRLMLGDIVGGKDPESGRSEKNWVLCLKDDFVEFGANAESTAGDLRTFGIPSGCWPVIAKLEKEVPWFKGVMEGAEKFMVKWHKEQEQIIILRAEERNK-NTGKKKEGQ---QSRGGREHGRVKRRKTEDTTEAEESRTEMTEQI-ERCVP 674
BLAST of mRNA_Ecto-sp13_S_contig1461.3539.1 vs. uniprot
Match: A0A812ZYE4_SYMMI (TOC64 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812ZYE4_SYMMI) HSP 1 Score: 74.7 bits (182), Expect = 5.340e-11 Identity = 42/106 (39.62%), Postives = 61/106 (57.55%), Query Frame = 1
Query: 3208 KLEGDEMMAAQRYEDAARLYSSLLDLQPSEVRVWGNRAQAYLYLGRFEEAERDATMVLGIDP--DNIKAHYRRGWARLKLRT-PNVEGGKEDLARVLSQEPGNKAA 3516
K G++ M Y A LY+ +DL PS + + NRAQAYL + RF EAE D+++V+ + N+KA +RR AR + T ++ EDL+ +L EP NK A
Sbjct: 65 KNAGNDAMKDNDYLRAIELYTEAIDLDPSNMMFFNNRAQAYLKVSRFGEAEADSSLVIDANKRLPNLKALFRRALARKGINTVKSLTAALEDLSAILKAEPANKEA 170
BLAST of mRNA_Ecto-sp13_S_contig1461.3539.1 vs. uniprot
Match: A0A899G3C6_9ASCO (RPAP3_C domain-containing protein n=1 Tax=Pneumocystis wakefieldiae TaxID=38082 RepID=A0A899G3C6_9ASCO) HSP 1 Score: 73.2 bits (178), Expect = 6.210e-10 Identity = 39/107 (36.45%), Postives = 61/107 (57.01%), Query Frame = 1
Query: 3208 KLEGDEMMAAQRYEDAARLYSSLLDLQPSEVRVWGNRAQAYLYLGRFEEAERDATMVLGIDPDNIKAHYRRGWARLKLRTPNVEGGKEDLARVLSQEPGNKAARDLL 3528
K++ D + ++ A LY+ L P + R+W NRAQ YL LGR+ +A D + L +P N+KA +RRG A + N++ KED +VL Q+P N+ ++ L
Sbjct: 7 KIQADAAYLKEDFKTAEALYTQALLKTPEDERLWTNRAQTYLQLGRWSDAIHDCSEALKRNPYNLKALFRRGKAY--EQQGNIKAAKEDWNQVLIQDPKNQIVQEAL 111
BLAST of mRNA_Ecto-sp13_S_contig1461.3539.1 vs. uniprot
Match: A0A671VBE9_SPAAU (Sperm associated antigen 1 n=2 Tax=Sparidae TaxID=8169 RepID=A0A671VBE9_SPAAU) HSP 1 Score: 74.3 bits (181), Expect = 1.730e-9 Identity = 67/214 (31.31%), Postives = 100/214 (46.73%), Query Frame = 1
Query: 3115 GAPSLNNS*VFLVLCHVEMPPCPGQEGDHPFKLEGDEMMAAQRYEDAARLYSSLLDLQPSEVRVWGNRAQAYLYLGRFEEAERDATMVLGIDPDNIKAHYRRGWARLKLRTPNVEGGKEDLARVLSQEPGNKAARDLLQNFEERVLD----EDAGVALTVVEDDSEDGCSW---------CPVS-TMPGRDEDERASLVFWRQGEQFKSSKKWH 3714
G P +N +L E +E D +G+E A YE+A YS L + P+ V + NRAQA ++L + A RD VL ++P NIKA RR A + T N + EDL VL++EP N AA LL E+++ + + G + + E + ED S+ CPV + P E+ A+ +G+ + KK H
Sbjct: 253 GQPKINTRVDASLLTQQEKLLLANREKD-----KGNEAFRANDYEEAIAYYSRSLSIIPT-VAAFNNRAQAEIHLKHWHSAMRDCQRVLELEPGNIKALLRR--ATVYHHTGNFQMATEDLRIVLTEEPQNAAATQLLSKTEKKMKECQPEQRKGKKILIQEVEEEDDNSYDERKAKQTACPVEPSQPVGGEESSAAPA--ERGDMGNAQKKPH 456
BLAST of mRNA_Ecto-sp13_S_contig1461.3539.1 vs. uniprot
Match: A0A2L2Z105_PARTP (Uncharacterized protein (Fragment) n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2Z105_PARTP) HSP 1 Score: 70.1 bits (170), Expect = 4.090e-9 Identity = 51/144 (35.42%), Postives = 74/144 (51.39%), Query Frame = 1
Query: 3190 EGDHPFKLE---GDEMMAAQRYEDAARLYSSLLDLQPSEVRVWGNRAQAYLYLGRFEEAERDATMVLGIDPDNIKAHYRRGWARLKLRTPNVEGGKEDLAR-----VLSQEPGNKAARDLLQNFEERVLDEDAGVALTVVEDDS 3597
E +H LE G+E A+ YE+A YS L + + + NRAQAY+ L ++ A +D VL ++PDNIKA YRRG A + E G DLA VL +P +AA++ LQ E +++ + + E DS
Sbjct: 86 ECEHISNLENTKGNEAFKAEEYEEAVTYYSRSLSVHKT-TKTLNNRAQAYIKLKNYKAAVKDCIEVLNLEPDNIKAIYRRGLA-------HKEAGLYDLAAIDFYLVLEIDPDCQAAQNQLQQMENEKGNKNTEAKILIEELDS 221
BLAST of mRNA_Ecto-sp13_S_contig1461.3539.1 vs. uniprot
Match: A0A0C2Y4D2_HEBCY (RPAP3_C domain-containing protein n=1 Tax=Hebeloma cylindrosporum h7 TaxID=686832 RepID=A0A0C2Y4D2_HEBCY) HSP 1 Score: 71.6 bits (174), Expect = 5.050e-9 Identity = 41/108 (37.96%), Postives = 61/108 (56.48%), Query Frame = 1
Query: 3208 KLEGDEMMAAQRYEDAARLYSSLLDLQPSEVRVWGNRAQAYLYLGRFEEAERDATMVLGIDPDNIKAHYRRGWARLKLRTPNVEGGKEDLARVLSQEPGNKAARDLLQ 3531
K +G+ Y A Y++ + ++ NRA AYL LG++E+AERD T V+G+D N+KA +RRG AR + T N+ + D VL +P N AA++ LQ
Sbjct: 10 KDKGNAAFKGGDYPTAIGHYTAAILADRNDPTYPLNRAAAYLKLGKYEDAERDCTTVIGLDASNVKALFRRGQAR--VGTGNLLQAQSDFGNVLRIDPANNAAQEELQ 115
BLAST of mRNA_Ecto-sp13_S_contig1461.3539.1 vs. uniprot
Match: A0A250XCZ9_9CHLO (Amidase domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XCZ9_9CHLO) HSP 1 Score: 72.4 bits (176), Expect = 6.620e-9 Identity = 43/115 (37.39%), Postives = 62/115 (53.91%), Query Frame = 1
Query: 3205 FKLEGDEMMAAQRYEDAARLYSSLLDLQPSEVRVWGNRAQAYLYLGRFEEAERDATMVLGI----DPDNIKAHYRRGWARLKLRTPNVEGGKEDLARVLSQEPGNKAARDLLQNF 3537
FK +G+EM +A R+ +A Y+ ++ P + NRA A + L RFE+AE D L + D +KA RR AR L+ + ++DL VL EPGN+ AR+ LQN
Sbjct: 793 FKAKGNEMYSAGRHAEAVTEYTKAINTNPQNAVYFNNRAMACIKLFRFEQAEDDCCKALQFPDLSEKDKVKALLRRATARDALQ--KYDEAEKDLREVLGLEPGNRQAREDLQNL 905
BLAST of mRNA_Ecto-sp13_S_contig1461.3539.1 vs. uniprot
Match: UPI001C7238AD (sperm-associated antigen 1 n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C7238AD) HSP 1 Score: 72.0 bits (175), Expect = 6.810e-9 Identity = 56/165 (33.94%), Postives = 81/165 (49.09%), Query Frame = 1
Query: 3190 EGDHPFKLE---GDEMMAAQRYEDAARLYSSLLDLQPSEVRVWGNRAQAYLYLGRFEEAERDATMVLGIDPDNIKAHYRRGWARLKLRTPNVEGGKEDLAR-----VLSQEPGNKAARDLLQNFEERVLDEDAGVALTVVEDDSEDGCSWCPVSTMPGRDEDERA 3660
E +H LE G+E A+ YE+A YS L + + + NRAQAY+ L ++ A +D VL ++PDNIKA YRRG A + E G DLA VL +P +AA++ LQ E +++ + + E DS D + +EDE A
Sbjct: 200 ECEHISNLENTKGNEAFKAKEYEEAVTYYSRSLSVHKT-TKTLNNRAQAYIKLKNYKAAVKDCIEVLNLEPDNIKAIYRRGLA-------HKEAGLYDLAAIDFYLVLGIDPDCQAAQNQLQQMENEKGNKNTEAKILIEELDSSDNEIGTALDEKKSFNEDETA 356
BLAST of mRNA_Ecto-sp13_S_contig1461.3539.1 vs. uniprot
Match: A0A8H7BER8_9FUNG (RPAP3_C domain-containing protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BER8_9FUNG) HSP 1 Score: 70.9 bits (172), Expect = 7.520e-9 Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = 1
Query: 3208 KLEGDEMMAAQRYEDAARLYSSLLDLQPSEVRVWGNRAQAYLYLGRFEEAERDATMVLGIDPDNIKAHYRRGWARLKLRTPNVEGGKEDLARVLSQEPGNKA 3513
K +G++ + Y A Y ++L P+ + NRA AYL L +F E ERD T L ++P N+KA +RRG A +L P E + D L+ +PGN A
Sbjct: 70 KEKGNQFFQKKEYHQAVEHYGRAIELDPTVSVYYLNRAMAYLKLNKFVEVERDCTQGLQLEPQNVKALWRRGIALRELGRP--EEARADFQSALTIDPGNNA 169 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1461.3539.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1461.3539.1 >prot_Ecto-sp13_S_contig1461.3539.1 ID=prot_Ecto-sp13_S_contig1461.3539.1|Name=mRNA_Ecto-sp13_S_contig1461.3539.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=236bp MPPCPGQEGDHPFKLEGDEMMAAQRYEDAARLYSSLLDLQPSEVRVWGNRback to top mRNA from alignment at Ecto-sp13_S_contig1461:6420..15468+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1461.3539.1 ID=mRNA_Ecto-sp13_S_contig1461.3539.1|Name=mRNA_Ecto-sp13_S_contig1461.3539.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9049bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1461:6420..15468+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1461:6420..15468+ >mRNA_Ecto-sp13_S_contig1461.3539.1 ID=mRNA_Ecto-sp13_S_contig1461.3539.1|Name=mRNA_Ecto-sp13_S_contig1461.3539.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=708bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1461:6420..15468+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |