prot_Ecto-sp13_S_contig14605.3535.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14605.3535.1
Unique Nameprot_Ecto-sp13_S_contig14605.3535.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length393
Homology
BLAST of mRNA_Ecto-sp13_S_contig14605.3535.1 vs. uniprot
Match: D8LDT3_ECTSI (ATP-binding cassette transporter, subfamily B, member 4, group TAP protein PpABCB4 MET type n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDT3_ECTSI)

HSP 1 Score: 655 bits (1691), Expect = 7.070e-226
Identity = 353/391 (90.28%), Postives = 363/391 (92.84%), Query Frame = 0
Query:    1 MPPRWRRTADVSLFEAIRSYTDVSASSFLVCVACLVGVADVGCAVALYGVVHSWAPGSWGPLVMLQHMWGDENFSKDTADILLLVVARLSVLPLIAFLAATKGKPPNAAPAPTARRADDASDGNSSRAGRGRTNQVAEKKKSLWRRVCSCFGYGESPISEGRGGTSERRQAPSSDLNSLEGGESLHQPLLSSTHGRGAGRINELNSSGFENGGGLSINGGASEEKSVAVGEGDTLTKTEIETDGARXXXXXXXXXXXXXXXXXAE-ALAERKKSAFLVVMFALSTAMQVYTGVKCVRFRFTKEVPEGLLMGIGVLWLNAMVWALNQLVADATMEEGLLEPSLHPHRLFPGSMAGHRCDMCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKVR 390
            MPPR  RTADVSLFEAIRSYTDVSASSFLVCVACL+GVADVGCAVALYGVVHSWAP SWGPLVMLQH+WGD+NFSKDTADILLLVVARLSVLPLIAFLAATKGKPPN APA TA  A +ASDGNSSRAGRGRTNQV  KKKSLWRRVC CFGYGES  S GRGGTS RRQAPSSDLNSLEGGESLHQPLLSSTHGRGAGR +E+NSSG+ENGGGLSINGGASEEKSVA GEGD +TKTEIETDGAR     XXXXXXXXXXXX   ALAERKKSAFLVVMFALSTAMQVYTGVKCVRFRFTKEVPEG+LMGIGVLWLNAMVWALNQLVADATMEEGLLEPSLHPHRLFPGSMAGHRCD+CQQRIKSQDAK WRCKLCDFDLCRSCYEKK R
Sbjct:    1 MPPRRMRTADVSLFEAIRSYTDVSASSFLVCVACLIGVADVGCAVALYGVVHSWAPRSWGPLVMLQHVWGDQNFSKDTADILLLVVARLSVLPLIAFLAATKGKPPNTAPASTASGAGNASDGNSSRAGRGRTNQVVGKKKSLWRRVCGCFGYGESATSAGRGGTSGRRQAPSSDLNSLEGGESLHQPLLSSTHGRGAGRSDEVNSSGYENGGGLSINGGASEEKSVAAGEGDKVTKTEIETDGARREREKXXXXXXXXXXXXXXXALAERKKSAFLVVMFALSTAMQVYTGVKCVRFRFTKEVPEGVLMGIGVLWLNAMVWALNQLVADATMEEGLLEPSLHPHRLFPGSMAGHRCDICQQRIKSQDAKGWRCKLCDFDLCRSCYEKKDR 391          
BLAST of mRNA_Ecto-sp13_S_contig14605.3535.1 vs. uniprot
Match: A0A7S0LVH6_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LVH6_9CRYP)

HSP 1 Score: 119 bits (298), Expect = 5.950e-26
Identity = 58/125 (46.40%), Postives = 79/125 (63.20%), Query Frame = 0
Query:  268 AERKKSAFLVVMFALSTAMQVYTGVKCVRFRFTKEVPEGLLMGIGVLWLNAMVWALNQLVADATMEEGL---LEPSLHPHRL-FPGSMAGHRCDMCQQRIKSQDAKAWRCKLCDFDLCRSCYEKK 388
            A  ++S F   +F +STA QV+ GVKC+ F+F  E+ +GLLMG GVLW+NAM W+L +LV      +G+     P LHPH L     +  H CD+C  R+   D +A+RCKLCDFDLC  C+ +K
Sbjct:  176 ARHRQSFFTGALFVVSTAAQVFIGVKCIGFKFPVELEQGLLMGSGVLWINAMTWSLRELVKSHRQADGIGYVRVPELHPHSLCLDPRVHNHYCDVCGLRMS--DGRAYRCKLCDFDLCVRCFSRK 298          
BLAST of mRNA_Ecto-sp13_S_contig14605.3535.1 vs. uniprot
Match: A0A7S1DV78_HEMAN (Hypothetical protein (Fragment) n=5 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DV78_HEMAN)

HSP 1 Score: 107 bits (268), Expect = 1.140e-21
Identity = 51/111 (45.95%), Postives = 71/111 (63.96%), Query Frame = 0
Query:  282 LSTAMQVYTGVKCVRFRFTKEVPEGLLMGIGVLWLNAMVWALNQLVADATMEEGLLE---PSLHPHRL-FPGSMAGHRCDMCQQRIKSQDAKAWRCKLCDFDLCRSCYEKK 388
            +S+A Q++ G+KC+ F+F  E  +G LMG+GVLW+N MVW+ +++V      EGL +   P LHPH L     +  H CD C  RI   + KA+RCKLCDFDLC  C+ +K
Sbjct:  143 ISSAAQLFVGLKCIGFKFPDEAMQGTLMGLGVLWINIMVWSTSEVVKAHNKAEGLGQAKIPELHPHTLTLHRKVHNHWCDKCSTRI--DNGKAYRCKLCDFDLCMRCFTRK 251          
BLAST of mRNA_Ecto-sp13_S_contig14605.3535.1 vs. uniprot
Match: A0A7S0U4T8_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U4T8_HEMAN)

HSP 1 Score: 103 bits (257), Expect = 3.010e-20
Identity = 50/115 (43.48%), Postives = 72/115 (62.61%), Query Frame = 0
Query:  278 VMFALSTAMQVYTGVKCVRFRFTKEVPEGLLMGIGVLWLNAMVWALNQLVADATMEEGLLE---PSLHPHRL-FPGSMAGHRCDMCQQRIKSQDAKAWRCKLCDFDLCRSCYEKK 388
            +M   S+A Q++ G+KC+ F+F  E  +GLLMG+GV+W+N MVW+ +++V      EGL +   P LHPH L    ++  H C  C  RI     KA+RCKLCDFD+C  C+ +K
Sbjct:    8 IMLFASSAAQLFVGLKCIGFQFPDEAVQGLLMGLGVVWINIMVWSTSEVVKAHNKSEGLGKAKIPELHPHTLTLHRNVHAHWCGKCFTRIDC--GKAYRCKLCDFDVCMRCFTRK 120          
BLAST of mRNA_Ecto-sp13_S_contig14605.3535.1 vs. uniprot
Match: A0A7S0YQB2_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YQB2_9CRYP)

HSP 1 Score: 103 bits (257), Expect = 3.410e-20
Identity = 50/115 (43.48%), Postives = 72/115 (62.61%), Query Frame = 0
Query:  278 VMFALSTAMQVYTGVKCVRFRFTKEVPEGLLMGIGVLWLNAMVWALNQLVADATMEEGLLE---PSLHPHRL-FPGSMAGHRCDMCQQRIKSQDAKAWRCKLCDFDLCRSCYEKK 388
            +M   S+A Q++ G+KC+ F+F  E  +GLLMG+GV+W+N MVW+ +++V      EGL +   P LHPH L    ++  H C  C  RI     KA+RCKLCDFD+C  C+ +K
Sbjct:  210 IMLFASSAAQLFVGLKCIGFQFPDEAVQGLLMGLGVVWINIMVWSTSEVVKAHNKSEGLGKAKIPELHPHTLTLHRNVHNHWCGKCFTRIDC--GKAYRCKLCDFDVCMRCFTRK 322          
BLAST of mRNA_Ecto-sp13_S_contig14605.3535.1 vs. uniprot
Match: R1C256_EMIHU (ABC transmembrane type-1 domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C256_EMIHU)

HSP 1 Score: 98.6 bits (244), Expect = 1.400e-18
Identity = 51/130 (39.23%), Postives = 71/130 (54.62%), Query Frame = 0
Query:  268 AERKKSAFLVVMFALSTAMQVYTGVKCVRFRFTKE------VPEGLLMGIGVLWLNAMVWALNQLVADATMEEGLLEPSLHPHRL-FPGSMAGHRCDMCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKVR 390
            AE +K   +  +F +STA QVY GVKC+ FR   E        +G+L G+ VL +N   W L +LV   T E G   P  H H L F  S+  H+CD+C+ +      + +RC LCD+D C +C+ KK R
Sbjct:  400 AEVRKGLLVAAIFGVSTAAQVYVGVKCISFRGEWERDAHVLTAQGVLFGVAVLLINVESWLLKRLVHALTAEVGFFVPEFHSHPLYFHPSVPNHKCDLCRNKT----GQVYRCPLCDWDACPACFNKKDR 525          
BLAST of mRNA_Ecto-sp13_S_contig14605.3535.1 vs. uniprot
Match: A0A7S3TF98_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TF98_EMIHU)

HSP 1 Score: 97.1 bits (240), Expect = 4.980e-18
Identity = 50/130 (38.46%), Postives = 70/130 (53.85%), Query Frame = 0
Query:  268 AERKKSAFLVVMFALSTAMQVYTGVKCVRFRFTKE------VPEGLLMGIGVLWLNAMVWALNQLVADATMEEGLLEPSLHPHRL-FPGSMAGHRCDMCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKVR 390
            AE +K   +  +F +STA QVY GVKC+ FR   E        +G+  G+ VL +N   W L +LV   T E G   P  H H L F  S+  H+CD+C+ +      + +RC LCD+D C +C+ KK R
Sbjct:  175 AEVRKGLLVAAIFGVSTAAQVYVGVKCISFRGEWERDAHVLTAQGVFFGVAVLLINVESWLLKRLVHALTAEVGFFVPEFHSHPLYFHPSVPNHKCDLCRNKT----GQVYRCPLCDWDACPACFNKKDR 300          
BLAST of mRNA_Ecto-sp13_S_contig14605.3535.1 vs. uniprot
Match: A0A812YBS6_9DINO (ABCB25 protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812YBS6_9DINO)

HSP 1 Score: 94.0 bits (232), Expect = 5.160e-17
Identity = 45/124 (36.29%), Postives = 71/124 (57.26%), Query Frame = 0
Query:  268 AERKKSAFLVVMFALSTAMQVYTGVKCVRFRFTKE--VPEGLLMGIGVLWLNAMVWALNQLVADATMEEGLLEPSLHPHRLF-PGSMAGHRCDMCQQRIKSQDAKAWRCKLCDFDLCRSCYEKK 388
            A+R+K   ++V+FA+ST M  Y G+KC+ F +       +G L  + ++ +N   + L  L+   T E+G L P +H H LF    +  H CD+C  ++K     A+RC+ CDFDLC  CY++K
Sbjct:  146 ADRRKEIIMLVLFAISTGMSFYNGIKCIVFHYDPRFLALQGTLQALTMVMINVEYFMLKNLLNKFTEEQGELIPHIHMHPLFFETGLKCHGCDVCGDQMKGPHYIAYRCRTCDFDLCPRCYKQK 269          
BLAST of mRNA_Ecto-sp13_S_contig14605.3535.1 vs. uniprot
Match: A0A812TFL8_9DINO (ABCB1 protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812TFL8_9DINO)

HSP 1 Score: 92.8 bits (229), Expect = 6.290e-17
Identity = 44/124 (35.48%), Postives = 71/124 (57.26%), Query Frame = 0
Query:  268 AERKKSAFLVVMFALSTAMQVYTGVKCVRFRFTKE--VPEGLLMGIGVLWLNAMVWALNQLVADATMEEGLLEPSLHPHRLF-PGSMAGHRCDMCQQRIKSQDAKAWRCKLCDFDLCRSCYEKK 388
            A+R+K   ++V+FA+ST M  Y G+KC+ + +       +G L  + ++ +N   + L  L+   T E+G L P +H H LF    +  H CD+C  ++K     A+RC+ CDFDLC  CY++K
Sbjct:  146 ADRRKEIIMLVLFAISTGMSFYNGIKCIVYHYDPRFLALQGTLQALTMVMINVEYFMLKNLLNKFTEEQGELIPHIHMHPLFFETGLKCHGCDVCGDQMKGPHYIAYRCRTCDFDLCPRCYKQK 269          
BLAST of mRNA_Ecto-sp13_S_contig14605.3535.1 vs. uniprot
Match: A0A813HMK6_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HMK6_POLGL)

HSP 1 Score: 87.8 bits (216), Expect = 8.390e-17
Identity = 42/124 (33.87%), Postives = 69/124 (55.65%), Query Frame = 0
Query:  268 AERKKSAFLVVMFALSTAMQVYTGVKCVRFRFTKEV--PEGLLMGIGVLWLNAMVWALNQLVADATMEEGLLEPSLHPHRLF-PGSMAGHRCDMCQQRIKSQDAKAWRCKLCDFDLCRSCYEKK 388
            A+ ++   ++++FA+ST M +Y G+KC+ F +  ++   +G L    + ++N   + L   +   T E+G L   LH H LF    +  HRCD+C    K     A+RC+ CDFDLC  CY++K
Sbjct:   54 ADVRRDVVMMLLFAISTGMSMYNGLKCISFHYDPKLLAAQGTLQASIIFFINLEYFMLKDFLKKLTEEKGELIAHLHMHPLFFDTGLKCHRCDVCSDATKGPHYIAYRCRTCDFDLCPRCYKQK 177          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14605.3535.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LDT3_ECTSI7.070e-22690.28ATP-binding cassette transporter, subfamily B, mem... [more]
A0A7S0LVH6_9CRYP5.950e-2646.40Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7S1DV78_HEMAN1.140e-2145.95Hypothetical protein (Fragment) n=5 Tax=Hemiselmis... [more]
A0A7S0U4T8_HEMAN3.010e-2043.48Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0YQB2_9CRYP3.410e-2043.48Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
R1C256_EMIHU1.400e-1839.23ABC transmembrane type-1 domain-containing protein... [more]
A0A7S3TF98_EMIHU4.980e-1838.46Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A812YBS6_9DINO5.160e-1736.29ABCB25 protein n=3 Tax=Symbiodinium TaxID=2949 Rep... [more]
A0A812TFL8_9DINO6.290e-1735.48ABCB1 protein n=1 Tax=Symbiodinium necroappetens T... [more]
A0A813HMK6_POLGL8.390e-1733.87Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 235..271
NoneNo IPR availableGENE3D3.30.60.90coord: 352..391
e-value: 5.1E-6
score: 28.3
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..51
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 328..392
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..100
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 293..306
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 274..292
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 307..327
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 101..273
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 52..80
NoneNo IPR availableSUPERFAMILY57889Cysteine-rich domaincoord: 339..386
NoneNo IPR availableTMHMMTMhelixcoord: 274..291
NoneNo IPR availableTMHMMTMhelixcoord: 306..328
NoneNo IPR availableTMHMMTMhelixcoord: 78..100
NoneNo IPR availableTMHMMTMhelixcoord: 28..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14605contigEcto-sp13_S_contig14605:634..3887 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14605.3535.1mRNA_Ecto-sp13_S_contig14605.3535.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14605 634..3887 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14605.3535.1 ID=prot_Ecto-sp13_S_contig14605.3535.1|Name=mRNA_Ecto-sp13_S_contig14605.3535.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=393bp
MPPRWRRTADVSLFEAIRSYTDVSASSFLVCVACLVGVADVGCAVALYGV
VHSWAPGSWGPLVMLQHMWGDENFSKDTADILLLVVARLSVLPLIAFLAA
TKGKPPNAAPAPTARRADDASDGNSSRAGRGRTNQVAEKKKSLWRRVCSC
FGYGESPISEGRGGTSERRQAPSSDLNSLEGGESLHQPLLSSTHGRGAGR
INELNSSGFENGGGLSINGGASEEKSVAVGEGDTLTKTEIETDGARKERE
KEEAERAAAAADAAEALAERKKSAFLVVMFALSTAMQVYTGVKCVRFRFT
KEVPEGLLMGIGVLWLNAMVWALNQLVADATMEEGLLEPSLHPHRLFPGS
MAGHRCDMCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKVRVF*
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