prot_Ecto-sp13_S_contig146.3532.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig146.3532.1
Unique Nameprot_Ecto-sp13_S_contig146.3532.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length422
Homology
BLAST of mRNA_Ecto-sp13_S_contig146.3532.1 vs. uniprot
Match: D8LLH4_ECTSI (Protein ARV n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLH4_ECTSI)

HSP 1 Score: 498 bits (1281), Expect = 2.240e-172
Identity = 367/423 (86.76%), Postives = 370/423 (87.47%), Query Frame = 0
Query:    1 MAVESSAETVSMKGSASLAEQQQQEVPAPAAAARPFVCVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAHLRHTALSSEAXXXXXXXXXXXXXXXXXXXXXPFWEAGGLLLAAVVEHACFAVGAVLFATNRVRTAAAXXXXXXXXXR-QTGRRSTRSTCTINGGRQEEDWDEYGXXXXXXXXXXXXXEWRRSGDVGGTGXXXXXXXXXXXXXXXXXXXXXXXXXYESSSSYSLPPPRPDSSSTVPSTAPSXXXXTAATL-YVGAGDGGGSSRAAKMYMAVVYPLFFRLLAAFVMIWDRQVAILNTIELLVATMQFVALSAVVGGPAAVSGMGEGGVAAMSVLAGLASKMAARAVLCLWFGSDPRTLRML 421
            MAV SSAET+SMKGSASLAEQ           ARPFVCVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAHLRHTALSSEAXXXXXXXXXXXXXXXXXXXXX             VEHACFA GAVLFAT+RVR AA XXXXXXXXX  QTGRRSTRST TINGGRQEEDWDEYGXXXXXXXXXXXXXEWR SGDVGGT XXXXXXXXXXXXXXXXXXXXXXXXXYESSSSYSLPPPRPDSSST+PS    XXXX    L            RAAKMYMAVVYPLFFRLLAAFVMIWDRQVAILNTIELLVATMQFVALSAVVGGPAAVSGMGEGGVAAMSVLAGLASKMAARAVLCLWFGSDPRTLRML
Sbjct:    1 MAVGSSAETMSMKGSASLAEQXXXXXXXXXXXARPFVCVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAHLRHTALSSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEHACFAAGAVLFATSRVRAAAXXXXXXXXXXXXQTGRRSTRSTGTINGGRQEEDWDEYGXXXXXXXXXXXXXEWRSSGDVGGTXXXXXXXXXXXXXXXXXXXXXXXXXXYESSSSYSLPPPRPDSSSTIPSXXXXXXXXXXXPLCXXXXXXXXXXXRAAKMYMAVVYPLFFRLLAAFVMIWDRQVAILNTIELLVATMQFVALSAVVGGPAAVSGMGEGGVAAMSVLAGLASKMAARAVLCLWFGSDPRTLRML 423          
BLAST of mRNA_Ecto-sp13_S_contig146.3532.1 vs. uniprot
Match: A0A7S1CNP5_9STRA (Protein ARV (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CNP5_9STRA)

HSP 1 Score: 105 bits (261), Expect = 9.870e-24
Identity = 45/87 (51.72%), Postives = 61/87 (70.11%), Query Frame = 0
Query:   36 FVCVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALD 122
             +CV CGR ++ +FREY+KGNIRL RC +C++VADKYIE+E VLIAID+ LHR+  YRHLLFN   +  H     +  + + +  LD
Sbjct:   15 MICVVCGRSLSHVFREYSKGNIRLSRCDHCKNVADKYIEYELVLIAIDMVLHRISVYRHLLFNRLEYQEHGVPRPIVMIAIAILCLD 101          
BLAST of mRNA_Ecto-sp13_S_contig146.3532.1 vs. uniprot
Match: A0A836DLE2_9ROSI (Protein ARV n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836DLE2_9ROSI)

HSP 1 Score: 101 bits (251), Expect = 2.840e-21
Identity = 47/87 (54.02%), Postives = 62/87 (71.26%), Query Frame = 0
Query:   38 CVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAH 124
            CVECG P+  LF +Y+ GNIRL RC  C++VAD+YIE EF++I+IDL LH+ +AYRHLLFN+    T +F G LW+       LDA+
Sbjct:   16 CVECGFPIKTLFVQYSPGNIRLMRCENCKAVADEYIECEFMIISIDLILHKTKAYRHLLFNVINQHTVNFEGSLWKSIFAFLLLDAY 102          
BLAST of mRNA_Ecto-sp13_S_contig146.3532.1 vs. uniprot
Match: A0A2P2MPP1_RHIMU (Protein ARV n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2MPP1_RHIMU)

HSP 1 Score: 99.4 bits (246), Expect = 3.190e-21
Identity = 45/89 (50.56%), Postives = 64/89 (71.91%), Query Frame = 0
Query:   36 FVCVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAH 124
            + CV+CG  +  LF +Y+ GNIRL +C  C++VAD+YIE EF++I IDL LH+ QAYRHLL+N+    T +F+G LW+  +G   LDA+
Sbjct:    4 YRCVKCGFRIKTLFVQYSPGNIRLMKCENCKAVADEYIECEFMIILIDLILHKPQAYRHLLYNVLFQETVNFQGLLWKSTIGFLVLDAY 92          
BLAST of mRNA_Ecto-sp13_S_contig146.3532.1 vs. uniprot
Match: A0A3N7FYG6_POPTR (Protein ARV n=7 Tax=Populus TaxID=3689 RepID=A0A3N7FYG6_POPTR)

HSP 1 Score: 100 bits (249), Expect = 4.050e-21
Identity = 47/87 (54.02%), Postives = 61/87 (70.11%), Query Frame = 0
Query:   38 CVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAH 124
            CVECG P+  LF +Y+ GNIRL RC  C++VAD+YIE EF++I IDL LH+ +AYRHLLFN+    T +F G LW+       LDA+
Sbjct:    5 CVECGFPIKTLFVQYSPGNIRLMRCENCKAVADEYIECEFMIILIDLILHKTKAYRHLLFNVINQHTVNFEGSLWKSIFAFLLLDAY 91          
BLAST of mRNA_Ecto-sp13_S_contig146.3532.1 vs. uniprot
Match: A0A3N7G147_POPTR (Protein ARV n=9 Tax=Populus TaxID=3689 RepID=A0A3N7G147_POPTR)

HSP 1 Score: 100 bits (249), Expect = 8.900e-21
Identity = 47/87 (54.02%), Postives = 61/87 (70.11%), Query Frame = 0
Query:   38 CVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAH 124
            CVECG P+  LF +Y+ GNIRL RC  C++VAD+YIE EF++I IDL LH+ +AYRHLLFN+    T +F G LW+       LDA+
Sbjct:    5 CVECGFPIKTLFVQYSPGNIRLMRCENCKAVADEYIECEFMIILIDLILHKTKAYRHLLFNVINQHTVNFEGSLWKSIFAFLLLDAY 91          
BLAST of mRNA_Ecto-sp13_S_contig146.3532.1 vs. uniprot
Match: W7TPQ8_9STRA (Protein ARV n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPQ8_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.020e-20
Identity = 44/92 (47.83%), Postives = 69/92 (75.00%), Query Frame = 0
Query:   37 VCVECGRPVAL-LFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAHLRH 127
            +C+ECG+PV   L+REY+K NIRL RC +C +VAD+ IE+E VL+ +DLALHR+ A+RH+LFN +P +   F  +LW++ + +  +D H+++
Sbjct:   45 LCIECGKPVTEGLYREYSKDNIRLSRCEFCGAVADRLIEYELVLVGLDLALHRLPAWRHILFNRQPHAKLEF-AQLWRMALVLTLVDTHIKY 135          
BLAST of mRNA_Ecto-sp13_S_contig146.3532.1 vs. uniprot
Match: A0A1Y2GYY3_9FUNG (Protein ARV n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GYY3_9FUNG)

HSP 1 Score: 98.6 bits (244), Expect = 5.440e-20
Identity = 43/98 (43.88%), Postives = 64/98 (65.31%), Query Frame = 0
Query:   37 VCVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAHLRHTALSSEA 134
            +CVECG  V+ L+ EY+KGNIRL  C +C+ +ADKY+E +FV+I +D+ LH+   YRHLLFN  P+        +++LGV +   D +++   L  EA
Sbjct:    3 ICVECGAAVSSLYTEYSKGNIRLTYCEHCKKLADKYVEHDFVIIFVDMVLHKKPVYRHLLFNRLPYRDLGIDPNVFKLGVLLILFDVYIKWFRLEQEA 100          
BLAST of mRNA_Ecto-sp13_S_contig146.3532.1 vs. uniprot
Match: A0A2I1G244_9GLOM (Protein ARV n=12 Tax=Glomeraceae TaxID=36751 RepID=A0A2I1G244_9GLOM)

HSP 1 Score: 97.4 bits (241), Expect = 5.550e-20
Identity = 42/89 (47.19%), Postives = 59/89 (66.29%), Query Frame = 0
Query:   38 CVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAHLR 126
            CVECG PV  L+ EY+KGNIRL  C  C+  ADKY+E +FV+I ID+ LH+ Q YRHLLFN   +  H     +++LG+ +   D +++
Sbjct:    4 CVECGAPVTNLYTEYSKGNIRLTPCEKCKKFADKYVEHDFVIIFIDMLLHKPQVYRHLLFNRLEYRDHGIDPNVFKLGILLILFDVYIK 92          
BLAST of mRNA_Ecto-sp13_S_contig146.3532.1 vs. uniprot
Match: UPI0012461EB1 (protein ARV 2 n=1 Tax=Quercus lobata TaxID=97700 RepID=UPI0012461EB1)

HSP 1 Score: 97.1 bits (240), Expect = 2.190e-19
Identity = 45/91 (49.45%), Postives = 61/91 (67.03%), Query Frame = 0
Query:   36 FVCVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAHLR 126
            + CVECG  +  LF +Y+ GNIRL +C  C++VAD+YIE  F+++ IDL LH+ +AYRHLLFN+       F G LW+  VG   LDA+ R
Sbjct:    6 YRCVECGFRIKTLFVQYSPGNIRLMKCENCKAVADEYIECNFLILLIDLILHKPKAYRHLLFNVLKQGAPHFEGLLWKSTVGYLLLDAYRR 96          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig146.3532.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLH4_ECTSI2.240e-17286.76Protein ARV n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A7S1CNP5_9STRA9.870e-2451.72Protein ARV (Fragment) n=1 Tax=Bicosoecida sp. CB-... [more]
A0A836DLE2_9ROSI2.840e-2154.02Protein ARV n=1 Tax=Salix suchowensis TaxID=127890... [more]
A0A2P2MPP1_RHIMU3.190e-2150.56Protein ARV n=1 Tax=Rhizophora mucronata TaxID=611... [more]
A0A3N7FYG6_POPTR4.050e-2154.02Protein ARV n=7 Tax=Populus TaxID=3689 RepID=A0A3N... [more]
A0A3N7G147_POPTR8.900e-2154.02Protein ARV n=9 Tax=Populus TaxID=3689 RepID=A0A3N... [more]
W7TPQ8_9STRA1.020e-2047.83Protein ARV n=1 Tax=Nannochloropsis gaditana TaxID... [more]
A0A1Y2GYY3_9FUNG5.440e-2043.88Protein ARV n=1 Tax=Lobosporangium transversale Ta... [more]
A0A2I1G244_9GLOM5.550e-2047.19Protein ARV n=12 Tax=Glomeraceae TaxID=36751 RepID... [more]
UPI0012461EB12.190e-1949.45protein ARV 2 n=1 Tax=Quercus lobata TaxID=97700 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007290Arv1 proteinPFAMPF04161Arv1coord: 37..190
e-value: 5.1E-31
score: 108.5
IPR007290Arv1 proteinPANTHERPTHR14467ARV1coord: 37..403
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..327
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 412..421
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 381..385
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 360..380
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 328..348
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 386..411
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 349..359
NoneNo IPR availableTMHMMTMhelixcoord: 389..411
NoneNo IPR availableTMHMMTMhelixcoord: 352..374
NoneNo IPR availableTMHMMTMhelixcoord: 328..347

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig146contigEcto-sp13_S_contig146:28597..31931 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig146.3532.1mRNA_Ecto-sp13_S_contig146.3532.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig146 28154..31931 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig146.3532.1 ID=prot_Ecto-sp13_S_contig146.3532.1|Name=mRNA_Ecto-sp13_S_contig146.3532.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=422bp
MAVESSAETVSMKGSASLAEQQQQEVPAPAAAARPFVCVECGRPVALLFR
EYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMR
PFSTHSFRGRLWQLGVGMAALDAHLRHTALSSEAAAAAAQESAGSVVVAG
DEGGDPFWEAGGLLLAAVVEHACFAVGAVLFATNRVRTAAAAARARQNRN
RQTGRRSTRSTCTINGGRQEEDWDEYGGGGRSAADRRDDDEWRRSGDVGG
TGGLGEGQQQGQQDRAGEEDGEDGEDGYESSSSYSLPPPRPDSSSTVPST
APSSATATAATLYVGAGDGGGSSRAAKMYMAVVYPLFFRLLAAFVMIWDR
QVAILNTIELLVATMQFVALSAVVGGPAAVSGMGEGGVAAMSVLAGLASK
MAARAVLCLWFGSDPRTLRML*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007290Arv1