prot_Ecto-sp13_S_contig146.3528.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig146.3528.1
Unique Nameprot_Ecto-sp13_S_contig146.3528.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length301
Homology
BLAST of mRNA_Ecto-sp13_S_contig146.3528.1 vs. uniprot
Match: A0A6H5JU58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU58_9PHAE)

HSP 1 Score: 426 bits (1094), Expect = 6.980e-133
Identity = 250/376 (66.49%), Postives = 255/376 (67.82%), Query Frame = 0
Query:    1 QVLRTVGGLVGGEGLKVSAVGKHITSLEGVPSGVSSRATHLFLSNNSLRWLRGVEAFSGVVCLSISHNLVRRTEDLHPLSLLAHLETLSLEGNPVCGAANYRAHVVSLTSACLKTLDGREVIYGETSDAAAIVAAERSATNKTSREHCLCLLLHHMSRLLECHAELREALLEAGSGCSTGGGGIGGDQLPWRFRRGGRVFDGRRVAWRQRMAVAMPVHQMLAVLQADSWPVFDQSELEVLERQTLDEAAEVL---------------------------------------------------------------------------ADVVTSRRTAGQRTNELLESAVATLNSPGTRMWVQVLGEVQRRTEGKVS 301
            QVLRTVG LVGG GLKVSAVGKHIT L+GVPSGVSSRATHLFLSNNSLRWLRGVEAFSGVVCLSISHNLVRRTEDLHPLSLLAHLETLSLEGNPVCGAANYRAHVVSL SACLKTLDGREVI GETSDA AIVAAERSAT+                                 SGCSTGGGGIGGDQLPWRFRRGGRVF+G+RVAWRQRMAVAMPVHQ      ADSWPVFDQSEL+VLERQTLDEAAEVL                                                                           ADVVTSRR AGQRTNELLESAVATLNSPGTRMWVQVLGEVQRRTEGKVS
Sbjct:   63 QVLRTVGELVGGGGLKVSAVGKHITLLKGVPSGVSSRATHLFLSNNSLRWLRGVEAFSGVVCLSISHNLVRRTEDLHPLSLLAHLETLSLEGNPVCGAANYRAHVVSLASACLKTLDGREVISGETSDAPAIVAAERSATS---------------------------------SGCSTGGGGIGGDQLPWRFRRGGRVFNGQRVAWRQRMAVAMPVHQ------ADSWPVFDQSELKVLERQTLDEAAEVLGEYGEQKRAFCLLGFMGSTVPSFQSSSWQTVDFSFDQLHLPNLGRRISQSVLSPASLTFRLCACDIFRWKRHGDQADVVTSRRAAGQRTNELLESAVATLNSPGTRMWVQVLGEVQRRTEGKVS 399          
BLAST of mRNA_Ecto-sp13_S_contig146.3528.1 vs. uniprot
Match: D8LLH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLH8_ECTSI)

HSP 1 Score: 306 bits (785), Expect = 2.590e-91
Identity = 194/346 (56.07%), Postives = 196/346 (56.65%), Query Frame = 0
Query:    1 QVLRTVGGLVGGEGLKVSAVGKHITSLEGVPSGVSSRATHLFLSNNSLRWLRGVEAFSGVVCLSISHNLVRRTEDLHPLSLLAHLETLSLEGNPVCGAANYRAHVVSLTSACLKTLDGREVIYGETSDAAAIVAAERSATNKTSREHCLCLLLHHMSRLLECHAELREALLEAGSGCSTGGGGIGGDQLPWRFRRGGRVFDGRRVAWRQRMAVAMPVHQMLAVLQADSWPVFDQSELEVLERQTLDEAAEVL---------------------------------------------ADVVTSRRTAGQRTNELLESAVATLNSPGTRMWVQVLGEVQRRTEGKVS 301
            QVLRTVGGLVGGEGLKVSAVGKHITSLEGVPSGVSSRAT LFLSNNSLRWLRGVEAFSGVVCLSISHNLVRRTEDLHPLSLLAHLE LSLEGNPVCGAANYRAHVVSL SACLKTLDGRE                                                                                                   MLAVLQADSWPVFDQSEL+VLERQ L+EAAEVL                                             ADVV SRR AGQRTNELLESAVATLNSPGTRMWVQVLGEVQRRTEGKVS
Sbjct:   69 QVLRTVGGLVGGEGLKVSAVGKHITSLEGVPSGVSSRATQLFLSNNSLRWLRGVEAFSGVVCLSISHNLVRRTEDLHPLSLLAHLEMLSLEGNPVCGAANYRAHVVSLASACLKTLDGRE---------------------------------------------------------------------------------------------------MLAVLQADSWPVFDQSELDVLERQILEEAAEVLVDFSFDQLHLPNLGRRVSQSILSPASLTFRLCACDIFPWKRHGDQADVVNSRRAAGQRTNELLESAVATLNSPGTRMWVQVLGEVQRRTEGKVS 315          
BLAST of mRNA_Ecto-sp13_S_contig146.3528.1 vs. uniprot
Match: A0A836C7E2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7E2_9STRA)

HSP 1 Score: 109 bits (273), Expect = 5.500e-23
Identity = 86/224 (38.39%), Postives = 108/224 (48.21%), Query Frame = 0
Query:    1 QVLRTVGGLVGGEGLKVSAVGKHITSLEGVPSGVSSRATHLFLSNNSLRWLRGVEAFSGVVCLSISHNLVRRTEDLHPLSLLAHLETLSLEGNPVCGAANYRAHVVSLTSACLKTLDGREVIYGETSDAAAIVAAERSATNKTSREHCLCLLLHHMSRLLECHAELREALLEAGSGCSTGGGGIGGDQLPWRFRRGGRVFDGRRVAWRQRMAVAMPVHQMLAVL 224
            Q L TV  L+   G ++SAVGK ITSL GVP  V++  T L LS N L  L G+  F+ +  LS+  NL+R T DL PL+ LA LE L+L GN V    N RAHV+ L    L+ LDG  V   E + A  IV  E +A ++            HM  L   H ELR+AL           G     + P R           R AWRQR     P+  +LA L
Sbjct:  118 QALHTVPNLLSHGGARLSAVGKFITSLAGVPPSVAAPVTSLLLSRNCLAALGGLRGFAALRRLSLRCNLLRYTCDLWPLAELAVLEELTLAGNAVLAMPNCRAHVLFLCCRALRELDGVAVTAEERAAAPLIVRKELAAQDRLVAGARAAAAAAHMRLLFTAHRELRDALW----------GRFAAARAPLR-----------RWAWRQRPLCDRPIASVLAAL 320          
BLAST of mRNA_Ecto-sp13_S_contig146.3528.1 vs. uniprot
Match: A0A662WF45_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WF45_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 2.670e-16
Identity = 53/154 (34.42%), Postives = 84/154 (54.55%), Query Frame = 0
Query:   13 EGLKVSAVGKHITSLEGVPSGVSSRATHLFLSNNSLRWLRGVEAFSGVVCLSISHNLVRRTEDLHPLSLLAHLETLSLEGNPVCGAANYRAHVVSLTSACLKTLDGREVIYGETSDAAAIVAAERSATNKTSREHCLCLLLHHMSRLLECHAEL 166
            +G +++AVGK I S+  VP  VS+  T L+LS N+LR L G++ F+GV  LS+  NL+  + ++  L+ L  L  L+L GNP+C   NYR   +      ++ LD  +V   E   A  + A + +     ++ H     L H+S+L+  H EL
Sbjct:   70 DGSRLNAVGKGILSVGRVPPSVSAHITALYLSQNNLRSLEGIDQFAGVRLLSVGGNLLACSAEIAKLARLPQLRNLNLMGNPICDQPNYRLRAIDALKQ-IQVLDNADVSKKEREIAPRVAAQDEALRAMVTQNHFDIQKLQHISQLIPLHKEL 222          
BLAST of mRNA_Ecto-sp13_S_contig146.3528.1 vs. uniprot
Match: D0MZL8_PHYIT (Uncharacterized protein n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0MZL8_PHYIT)

HSP 1 Score: 87.8 bits (216), Expect = 1.450e-15
Identity = 52/151 (34.44%), Postives = 83/151 (54.97%), Query Frame = 0
Query:   13 EGLKVSAVGKHITSLEGVPSGVSSRATHLFLSNNSLRWLRGVEAFSGVVCLSISHNLVRRTEDLHPLSLLAHLETLSLEGNPVCGAANYRAHVVSLTSACLKTLDGREVIYGETSDAAAIVAAERSATNKTSREHCLCLLLHHMSRLLECH 163
            +G +++AVGK +  L  VP  VS+  T L+LS NSLR L G+E FS V  LS+  NL+   +++  L+ LA L  L+L GNP+C   NYR  ++++    L+ LD  ++   E   A  + A + +     S+ H     L  +++L+  H
Sbjct:    3 DGARLNAVGKGLHVLGRVPPTVSASVTALYLSQNSLRSLEGIEQFSAVRLLSVGGNLIASEKEVAILNDLAQLRNLNLMGNPLCDQPNYRLRIIAMLDK-LQVLDNSDITKKERDAAPHVAAQDNALRGMVSQNHFGIQKLQRIAQLISLH 152          
BLAST of mRNA_Ecto-sp13_S_contig146.3528.1 vs. uniprot
Match: H3GNS2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GNS2_PHYRM)

HSP 1 Score: 85.9 bits (211), Expect = 1.780e-15
Identity = 55/153 (35.95%), Postives = 84/153 (54.90%), Query Frame = 0
Query:   13 EGLKVSAVGKHITSLEGVPSGVSSRATHLFLSNNSLRWLRGVEAFSGVVCLSISHNLVRRTEDLHPLSLLAHLETLSLEGNPVCGAANYRAHVVSLTSACLKTLDGREVIYGETSDAAAIVAAERSATNKTSREHCLCLLLHHMSRLLECHAE 165
            +G +++AVGK I  L  VPS V +  T L+LS N+LR L GVE F+ V  LS+  NLV   +++  L+ L  L  L+L GNP+C   NYR  VV++ +  L+ LD  +V   E   A  ++A + +      + H     L  +++L+  H E
Sbjct:   61 DGSRLNAVGKGIYVLGRVPSTVCAGVTALYLSQNNLRSLAGVEQFAAVRLLSVGGNLVASDKEVIRLTELPQLRNLNLMGNPLCDGPNYRLRVVAVLTK-LQVLDNSDVTKKEREAAPHVIAKDNALRAMVMQNHFDIHKLQRIAKLISLHKE 212          
BLAST of mRNA_Ecto-sp13_S_contig146.3528.1 vs. uniprot
Match: A0A6A4G9R2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A4G9R2_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 3.270e-15
Identity = 54/168 (32.14%), Postives = 89/168 (52.98%), Query Frame = 0
Query:   13 EGLKVSAVGKHITSLEGVPSGVSSRATHLFLSNNSLRWLRGVEAFSGVVCLSISHNLVRRTEDLHPLSLLAHLETLSLEGNPVCGAANYRAHVVSLTSACLKTLDGREVIYGETSDAAAIVAAERSATNKTSREHCLCLLLHHMSRLLECHAELREALLEAGSGCSTG 180
            +G +++AVGK +  L  VP  V +  T L+LS N++R L G+E F+ V  LS+  NL+    ++  L+ LA L  L+L GNP+C   NYR  VV++    L+ LD  ++   E   A  + A + +     ++ H     L  +++L+  H E    ++   +G STG
Sbjct:   77 DGARLNAVGKGVHVLGRVPPTVCASVTALYLSQNNMRSLEGIEQFAAVRLLSVGGNLIASDNEVARLNELAQLRNLNLMGNPLCDQPNYRLRVVAMLKK-LQVLDNTDITKKEREAAPNVAAQDDALRTMVTQNHFDIHKLQRIAQLIALHKEFYGCVM---AGVSTG 240          
BLAST of mRNA_Ecto-sp13_S_contig146.3528.1 vs. uniprot
Match: A0A0P1A6A7_PLAHL (Leucine-rich repeat n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6A7_PLAHL)

HSP 1 Score: 85.5 bits (210), Expect = 8.260e-15
Identity = 53/151 (35.10%), Postives = 84/151 (55.63%), Query Frame = 0
Query:   13 EGLKVSAVGKHITSLEGVPSGVSSRATHLFLSNNSLRWLRGVEAFSGVVCLSISHNLVRRTEDLHPLSLLAHLETLSLEGNPVCGAANYRAHVVSLTSACLKTLDGREVIYGETSDAAAIVAAERSATNKTSREHCLCLLLHHMSRLLECH 163
            +G +++AVGK I  L  VP  VS+  T L+LS N+LR L G++ F+ V  LSI  NL+    ++  L+ LA L  L+L GNPVC   NYR   +++ +  L+ LD  +V   E + A  I A + +  +  ++ H     L  +++L+  H
Sbjct:   74 DGARLNAVGKGIHLLGYVPPTVSASITALYLSQNNLRSLEGIDQFAAVRLLSIGGNLISSDMEVERLTELAQLRNLNLMGNPVCDLPNYRLRAIAILTK-LQVLDNADVTKKERALAPDIAAQDHALRSMVTQNHFNIQKLQRIAQLISLH 223          
BLAST of mRNA_Ecto-sp13_S_contig146.3528.1 vs. uniprot
Match: A0A329SNP0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SNP0_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 8.620e-15
Identity = 51/151 (33.77%), Postives = 84/151 (55.63%), Query Frame = 0
Query:   13 EGLKVSAVGKHITSLEGVPSGVSSRATHLFLSNNSLRWLRGVEAFSGVVCLSISHNLVRRTEDLHPLSLLAHLETLSLEGNPVCGAANYRAHVVSLTSACLKTLDGREVIYGETSDAAAIVAAERSATNKTSREHCLCLLLHHMSRLLECH 163
            +G +++AVGK I +L  VP  VS+  T L+LS N+L  L G++ FS V  LS+  NL+   +++  L+ LA L  L+L GNP+C   NYR  +++L +  L+ LD  ++   E   A  + A + +     S+ H     L  +++L+  H
Sbjct:   74 DGARLNAVGKGIHALGRVPPTVSASITALYLSQNNLLSLEGIDQFSAVRLLSVGGNLISSDKEVARLNELAQLRNLNLMGNPLCDQPNYRLRIIALLTK-LQVLDNSDITKRERDTAPHVAAQDNALRTMVSQNHFDIQKLQRIAQLILLH 223          
BLAST of mRNA_Ecto-sp13_S_contig146.3528.1 vs. uniprot
Match: A0A225WXC1_9STRA (LRRcap domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WXC1_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 8.820e-15
Identity = 60/168 (35.71%), Postives = 86/168 (51.19%), Query Frame = 0
Query:   13 EGLKVSAVGKHITSLEGVPSGVSSRATHLFLSNNSLRWLRGVEAFSGVVCLSISHNLVRRTEDLHPLSLLAHLETLSLEGNPVCGAANYRAHVVSLTSACLKTLDGREVIYGETSDAAAIVAAERSATNKTSREHCLCLLLHHMSRLLECHAELREALLEAGSGCSTG 180
            +G +++AVGK I SL  VP  + +  T L+LS N+LR L GVE FS V  LS+  NL+    +L  LS L  L  L+L GNP+C   NYR  VV+L    L+ LD  +V   E   A    A + +        H     L  +++L+  H E    ++   +G +TG
Sbjct:    5 DGARLNAVGKSIHSLGHVPPTICASVTALYLSQNNLRALEGVEQFSVVRLLSVGGNLIASDTELARLSELRQLRNLNLVGNPLCDQPNYRLRVVALLPK-LQVLDNCDVTKKERDAAPHAAAQDNALRMMVMHNHFDIQKLQRIAQLISFHKEFYGCVM---AGVATG 168          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig146.3528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JU58_9PHAE6.980e-13366.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLH8_ECTSI2.590e-9156.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C7E2_9STRA5.500e-2338.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A662WF45_9STRA2.670e-1634.42Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
D0MZL8_PHYIT1.450e-1534.44Uncharacterized protein n=3 Tax=Phytophthora infes... [more]
H3GNS2_PHYRM1.780e-1535.95Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6A4G9R2_9STRA3.270e-1532.14Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A0P1A6A7_PLAHL8.260e-1535.10Leucine-rich repeat n=1 Tax=Plasmopara halstedii T... [more]
A0A329SNP0_9STRA8.620e-1533.77Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
A0A225WXC1_9STRA8.820e-1535.71LRRcap domain-containing protein n=1 Tax=Phytophth... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 21..122
e-value: 7.0E-16
score: 59.9
NoneNo IPR availablePFAMPF14580LRR_9coord: 24..138
e-value: 9.6E-8
score: 31.7
NoneNo IPR availablePANTHERPTHR10552U2 SMALL NUCLEAR RIBONUCLEOPROTEIN Acoord: 21..144
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 21..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig146contigEcto-sp13_S_contig146:484..2784 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig146.3528.1mRNA_Ecto-sp13_S_contig146.3528.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig146 483..2784 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig146.3528.1 ID=prot_Ecto-sp13_S_contig146.3528.1|Name=mRNA_Ecto-sp13_S_contig146.3528.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=301bp
QVLRTVGGLVGGEGLKVSAVGKHITSLEGVPSGVSSRATHLFLSNNSLRW
LRGVEAFSGVVCLSISHNLVRRTEDLHPLSLLAHLETLSLEGNPVCGAAN
YRAHVVSLTSACLKTLDGREVIYGETSDAAAIVAAERSATNKTSREHCLC
LLLHHMSRLLECHAELREALLEAGSGCSTGGGGIGGDQLPWRFRRGGRVF
DGRRVAWRQRMAVAMPVHQMLAVLQADSWPVFDQSELEVLERQTLDEAAE
VLADVVTSRRTAGQRTNELLESAVATLNSPGTRMWVQVLGEVQRRTEGKV
S
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf