prot_Ecto-sp13_S_contig1459.3520.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1459.3520.1
Unique Nameprot_Ecto-sp13_S_contig1459.3520.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length256
Homology
BLAST of mRNA_Ecto-sp13_S_contig1459.3520.1 vs. uniprot
Match: A0A6H5KDJ3_9PHAE (Eukaryotic translation initiation factor 6 n=2 Tax=PX clade TaxID=569578 RepID=A0A6H5KDJ3_9PHAE)

HSP 1 Score: 349 bits (896), Expect = 2.530e-119
Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0
Query:   75 GNKRGLLVPNTTTDQELQHLRNALPDSVVIQRVEERLSALGNCIVTNDHVALVHTDLDRETEDLVADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDSLT 255
            GNKRGLLVPNTTTDQELQHLRNALPDSVVIQRVEERLSALGNCIVTNDHVALVHTDLDRETEDL+ADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDSLT
Sbjct:   65 GNKRGLLVPNTTTDQELQHLRNALPDSVVIQRVEERLSALGNCIVTNDHVALVHTDLDRETEDLLADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDSLT 245          
BLAST of mRNA_Ecto-sp13_S_contig1459.3520.1 vs. uniprot
Match: A0A4D9D8K6_9STRA (Eukaryotic translation initiation factor 6 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8K6_9STRA)

HSP 1 Score: 311 bits (797), Expect = 2.880e-104
Identity = 156/184 (84.78%), Postives = 175/184 (95.11%), Query Frame = 0
Query:   72 RVT-GNKRGLLVPNTTTDQELQHLRNALPDSVVIQRVEERLSALGNCIVTNDHVALVHTDLDRETEDLVADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDSL 254
            RVT GNKRGLLVP+TTTDQELQH+RN+LPD+VV+QRVEERLSALGNCIV NDHVALVHTDLDRETE+++ADVLGVEVFRQTIAGNALVGSY+ ITNQGGMVHP+T++ED+EELSSLLQIPLVAGTVNRGSDVLGAG+VANDW AFCGLDTTSTEISVVESIFKL +  P N+V ++R+SLIDSL
Sbjct:   61 RVTIGNKRGLLVPSTTTDQELQHIRNSLPDAVVVQRVEERLSALGNCIVANDHVALVHTDLDRETEEILADVLGVEVFRQTIAGNALVGSYSYITNQGGMVHPKTTVEDLEELSSLLQIPLVAGTVNRGSDVLGAGLVANDWAAFCGLDTTSTEISVVESIFKLQDNMPVNVVKTLRTSLIDSL 244          
BLAST of mRNA_Ecto-sp13_S_contig1459.3520.1 vs. uniprot
Match: W7UBL7_9STRA (Eukaryotic translation initiation factor 6 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBL7_9STRA)

HSP 1 Score: 312 bits (800), Expect = 1.150e-103
Identity = 157/184 (85.33%), Postives = 175/184 (95.11%), Query Frame = 0
Query:   72 RVT-GNKRGLLVPNTTTDQELQHLRNALPDSVVIQRVEERLSALGNCIVTNDHVALVHTDLDRETEDLVADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDSL 254
            RVT GNKRGLLVP+TTTDQELQH+RN+LPD+VV+QRVEERLSALGNCIV NDHVALVHTDLDRETE++VADVLGVEVFRQTIAGNALVGSY+ ITNQGGMVHP+T++ED+EELSSLLQIPLVAGTVNRGSDVLGAG+VANDW AFCGLDTTSTEISVVESIFKL +  P N+V ++R+SLIDSL
Sbjct:  133 RVTIGNKRGLLVPSTTTDQELQHIRNSLPDAVVVQRVEERLSALGNCIVANDHVALVHTDLDRETEEIVADVLGVEVFRQTIAGNALVGSYSYITNQGGMVHPKTTVEDLEELSSLLQIPLVAGTVNRGSDVLGAGLVANDWAAFCGLDTTSTEISVVESIFKLQDNMPVNVVKTLRTSLIDSL 316          
BLAST of mRNA_Ecto-sp13_S_contig1459.3520.1 vs. uniprot
Match: H3G8Q6_PHYRM (Eukaryotic translation initiation factor 6 n=27 Tax=Oomycota TaxID=4762 RepID=H3G8Q6_PHYRM)

HSP 1 Score: 303 bits (775), Expect = 6.350e-101
Identity = 149/185 (80.54%), Postives = 169/185 (91.35%), Query Frame = 0
Query:   71 RRVTGNKRGLLVPNTTTDQELQHLRNALPDSVVIQRVEERLSALGNCIVTNDHVALVHTDLDRETEDLVADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDSLT 255
            R   GNKRGLL+P+TTTDQE+QH+RNALPDSVV+QRVEERLSALGNCI TNDHVALVHTDLDRETE++VAD LGVEVFRQT+AGNALVGSY+ ++NQG +VHPRTS+ED EELSSLLQ+P+VAGTVNRGSDV+GAG+V NDWTAFCGLDTTSTEISVVESIFKL    P+ I  SMRS+LIDS+T
Sbjct:   61 RVAVGNKRGLLLPSTTTDQEMQHIRNALPDSVVVQRVEERLSALGNCIATNDHVALVHTDLDRETEEIVADTLGVEVFRQTVAGNALVGSYSALSNQGCLVHPRTSVEDQEELSSLLQVPVVAGTVNRGSDVIGAGLVVNDWTAFCGLDTTSTEISVVESIFKLQNAQPTAIATSMRSALIDSMT 245          
BLAST of mRNA_Ecto-sp13_S_contig1459.3520.1 vs. uniprot
Match: A0A7S2R9W4_9STRA (Eukaryotic translation initiation factor 6 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9W4_9STRA)

HSP 1 Score: 304 bits (779), Expect = 2.360e-100
Identity = 151/187 (80.75%), Postives = 171/187 (91.44%), Query Frame = 0
Query:   69 ITRRVTGNKRGLLVPNTTTDQELQHLRNALPDSVVIQRVEERLSALGNCIVTNDHVALVHTDLDRETEDLVADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDSLT 255
            I R   GN+RGLLVP+  TD ELQHLRN+LPD VVIQRVEERLSALGNCIV NDHVALVHTDLDRETED+VADVLGVEVFRQT+AGNALVGSY  I+NQGG+VHPRTS+ED+EELS+LLQ+PLVAGTVNRGSDVLGAG+V NDW+AFCGLDTTSTEISV+E+IF+LNE GP+ IV+ +RSSL+D LT
Sbjct:  140 IGRTTVGNRRGLLVPSNCTDGELQHLRNSLPDGVVIQRVEERLSALGNCIVANDHVALVHTDLDRETEDIVADVLGVEVFRQTVAGNALVGSYCRISNQGGIVHPRTSVEDMEELSALLQVPLVAGTVNRGSDVLGAGMVVNDWSAFCGLDTTSTEISVMEAIFRLNEAGPAAIVSDLRSSLMDQLT 326          
BLAST of mRNA_Ecto-sp13_S_contig1459.3520.1 vs. uniprot
Match: A0A482RUG4_9ARCH (Translation initiation factor 6 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUG4_9ARCH)

HSP 1 Score: 297 bits (761), Expect = 8.510e-99
Identity = 148/185 (80.00%), Postives = 167/185 (90.27%), Query Frame = 0
Query:   72 RVT-GNKRGLLVPNTTTDQELQHLRNALPDSVVIQRVEERLSALGNCIVTNDHVALVHTDLDRETEDLVADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDSLT 255
            RVT GNKRGLLVP+T TD ELQHLRNALP+S+VIQRVEERLSALGNCIVTNDHVALVHTD+DRETED++ADVLGVEVFRQT+AGNALVGSY  I+NQGG+VHPRT++ED+EELSSLLQ+PLVAGTVNRGSDV+GAG+V NDW AFCG+DTTSTE+SVVE IF+L       I   MRSSLIDSL+
Sbjct:   61 RVTVGNKRGLLVPSTCTDTELQHLRNALPESIVIQRVEERLSALGNCIVTNDHVALVHTDIDRETEDIIADVLGVEVFRQTVAGNALVGSYCKISNQGGLVHPRTTVEDLEELSSLLQVPLVAGTVNRGSDVVGAGLVVNDWAAFCGMDTTSTELSVVEGIFRLGGNDAQRIAKDMRSSLIDSLS 245          
BLAST of mRNA_Ecto-sp13_S_contig1459.3520.1 vs. uniprot
Match: D8R476_SELML (Eukaryotic translation initiation factor 6 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R476_SELML)

HSP 1 Score: 297 bits (760), Expect = 1.210e-98
Identity = 145/186 (77.96%), Postives = 168/186 (90.32%), Query Frame = 0
Query:   69 ITRRVTGNKRGLLVPNTTTDQELQHLRNALPDSVVIQRVEERLSALGNCIVTNDHVALVHTDLDRETEDLVADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDSL 254
            I R   GNK GLL+PN+TTDQEL H+RN+LPD VV+QRVEERLSALGNCI TND+V+LVHTDLD+ETE+LVADVLGVEVFRQTIAGN LVGSY V +N+GG+VHP TSIED++ELSSLLQ+PLVAGTVNRGSDV+GAG++ NDWTAFCGLDTT+TE+SVVES+FKL E  PS IVN MR+SLID+L
Sbjct:   59 IGRMCVGNKNGLLLPNSTTDQELLHIRNSLPDRVVVQRVEERLSALGNCIATNDYVSLVHTDLDKETEELVADVLGVEVFRQTIAGNVLVGSYGVFSNRGGLVHPHTSIEDLDELSSLLQVPLVAGTVNRGSDVIGAGLIVNDWTAFCGLDTTTTELSVVESVFKLRESQPSAIVNEMRASLIDTL 244          
BLAST of mRNA_Ecto-sp13_S_contig1459.3520.1 vs. uniprot
Match: A0A7S2BNU0_9STRA (Eukaryotic translation initiation factor 6 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BNU0_9STRA)

HSP 1 Score: 297 bits (761), Expect = 1.510e-98
Identity = 147/187 (78.61%), Postives = 166/187 (88.77%), Query Frame = 0
Query:   69 ITRRVTGNKRGLLVPNTTTDQELQHLRNALPDSVVIQRVEERLSALGNCIVTNDHVALVHTDLDRETEDLVADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDSLT 255
            I R   GN+RGLLVP+T TDQELQ+LRN LPD VVIQRVEERLSALGNCI  NDHVALVHTD+DRETED+++DVLGV+VFRQT+AGNALVGSY   +N GGMVHPRT IED+EELS+LLQ+PLVAGTVNRGSDVLGAG+V NDWTAF GLDTTSTE+SV+E+IFKL EQGPS IV  +RSSL+D LT
Sbjct:   76 IGRTTVGNRRGLLVPSTCTDQELQYLRNCLPDGVVIQRVEERLSALGNCIAANDHVALVHTDIDRETEDIISDVLGVDVFRQTVAGNALVGSYCRFSNVGGMVHPRTPIEDMEELSALLQVPLVAGTVNRGSDVLGAGMVVNDWTAFTGLDTTSTEVSVIEAIFKLQEQGPSAIVTDLRSSLLDQLT 262          
BLAST of mRNA_Ecto-sp13_S_contig1459.3520.1 vs. uniprot
Match: A8HUE0_CHLRE (Eukaryotic translation initiation factor 6 n=9 Tax=Chlamydomonadales TaxID=3042 RepID=A8HUE0_CHLRE)

HSP 1 Score: 296 bits (759), Expect = 1.710e-98
Identity = 139/184 (75.54%), Postives = 168/184 (91.30%), Query Frame = 0
Query:   71 RRVTGNKRGLLVPNTTTDQELQHLRNALPDSVVIQRVEERLSALGNCIVTNDHVALVHTDLDRETEDLVADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDSL 254
            R   GN+ GLL+PNTT+DQELQH+RN LPD VV+QR++ERLSALGNCIV ND+VAL+H D+DRETE++VADVLGVEVFRQT+AGN LVGSYA +TNQGG+VHP+TSIED++ELSSLLQIPLVAGT+NRGSDV+GAG+VANDW AFCGLDTTSTE+SV+ES+FKL +  P NIVN +R+SLID++
Sbjct:   61 RLTVGNRNGLLLPNTTSDQELQHIRNCLPDEVVVQRIDERLSALGNCIVCNDYVALIHPDIDRETEEIVADVLGVEVFRQTVAGNVLVGSYAALTNQGGLVHPKTSIEDLDELSSLLQIPLVAGTINRGSDVIGAGLVANDWAAFCGLDTTSTELSVIESVFKLRDAQPMNIVNDLRASLIDTM 244          
BLAST of mRNA_Ecto-sp13_S_contig1459.3520.1 vs. uniprot
Match: A9NTP3_PICSI (Eukaryotic translation initiation factor 6 n=2 Tax=Pinidae TaxID=3313 RepID=A9NTP3_PICSI)

HSP 1 Score: 295 bits (756), Expect = 4.900e-98
Identity = 142/183 (77.60%), Postives = 166/183 (90.71%), Query Frame = 0
Query:   71 RRVTGNKRGLLVPNTTTDQELQHLRNALPDSVVIQRVEERLSALGNCIVTNDHVALVHTDLDRETEDLVADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDS 253
            R   GNK G L+PNTTTDQELQHLRN+LPD VV+QRVEERLSALGNC+V NDHVAL+HTDLDRETE+L+ADVLGVEVFRQTIAGN LVGSY V++N+GG+VHP TSIED++ELS+LLQ+PLVAGTVNRGS+V+GAG++ NDWTAFCGLDTT+TE+SVVES+FKL E  PS IV+ MR SLID+
Sbjct:   61 RLCAGNKNGPLLPNTTTDQELQHLRNSLPDKVVVQRVEERLSALGNCVVCNDHVALIHTDLDRETEELIADVLGVEVFRQTIAGNILVGSYCVLSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGMIVNDWTAFCGLDTTATELSVVESVFKLRESQPSAIVDEMRKSLIDT 243          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1459.3520.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDJ3_9PHAE2.530e-11999.45Eukaryotic translation initiation factor 6 n=2 Tax... [more]
A0A4D9D8K6_9STRA2.880e-10484.78Eukaryotic translation initiation factor 6 n=1 Tax... [more]
W7UBL7_9STRA1.150e-10385.33Eukaryotic translation initiation factor 6 n=1 Tax... [more]
H3G8Q6_PHYRM6.350e-10180.54Eukaryotic translation initiation factor 6 n=27 Ta... [more]
A0A7S2R9W4_9STRA2.360e-10080.75Eukaryotic translation initiation factor 6 n=1 Tax... [more]
A0A482RUG4_9ARCH8.510e-9980.00Translation initiation factor 6 n=1 Tax=archaeon T... [more]
D8R476_SELML1.210e-9877.96Eukaryotic translation initiation factor 6 n=2 Tax... [more]
A0A7S2BNU0_9STRA1.510e-9878.61Eukaryotic translation initiation factor 6 n=1 Tax... [more]
A8HUE0_CHLRE1.710e-9875.54Eukaryotic translation initiation factor 6 n=9 Tax... [more]
A9NTP3_PICSI4.900e-9877.60Eukaryotic translation initiation factor 6 n=2 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002769Translation initiation factor IF6SMARTSM00654eIF6neu2coord: 24..214
e-value: 6.3E-79
score: 278.2
IPR002769Translation initiation factor IF6PFAMPF01912eIF-6coord: 66..213
e-value: 1.3E-60
score: 204.2
IPR002769Translation initiation factor IF6TIGRFAMTIGR00323TIGR00323coord: 73..234
e-value: 7.1E-60
score: 200.0
IPR002769Translation initiation factor IF6PANTHERPTHR10784EUKARYOTIC TRANSLATION INITIATION FACTOR 6coord: 65..253
IPR002769Translation initiation factor IF6HAMAPMF_00032eIF_6coord: 1..255
score: 97.355
NoneNo IPR availableGENE3D3.75.10.10coord: 62..235
e-value: 9.2E-81
score: 272.2
NoneNo IPR availablePANTHERPTHR10784:SF4EUKARYOTIC TRANSLATION INITIATION FACTOR 6-1-RELATEDcoord: 65..253
NoneNo IPR availableSUPERFAMILY55909Penteincoord: 66..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1459contigEcto-sp13_S_contig1459:331..2049 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1459.3520.1mRNA_Ecto-sp13_S_contig1459.3520.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1459 309..2840 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1459.3520.1 ID=prot_Ecto-sp13_S_contig1459.3520.1|Name=mRNA_Ecto-sp13_S_contig1459.3520.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=256bp
MAWSIFHDEETQFLVNTRESSHLFEGRKRVSEHGPLSHTCLPHSPYLPDR
LITRFKSQPLPPLTSATTITRRVTGNKRGLLVPNTTTDQELQHLRNALPD
SVVIQRVEERLSALGNCIVTNDHVALVHTDLDRETEDLVADVLGVEVFRQ
TIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGS
DVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSL
IDSLT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002769eIF6