prot_Ecto-sp13_S_contig14587.3517.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14587.3517.1
Unique Nameprot_Ecto-sp13_S_contig14587.3517.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length393
Homology
BLAST of mRNA_Ecto-sp13_S_contig14587.3517.1 vs. uniprot
Match: D7FKD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD6_ECTSI)

HSP 1 Score: 686 bits (1770), Expect = 2.110e-243
Identity = 357/393 (90.84%), Postives = 363/393 (92.37%), Query Frame = 0
Query:    1 GRFGKGPATRAGGLASTMPVQGTLGQRPKPFFATALMLSRSDDSPASEGGSPFEGWGAGKSRRGTGRTDSIFTQGPNDPGVEAVIQAKVTTLISRRGPELEALLLLRDPERSGNIPVKAFSECLRAWVSSDSERGGGGAADHTRAGKRDGPSQAAELTHADRKVLYRRWAVRGQVRYVDFLGASGYFNAPLPRYSEISTAVAAAPAASAAPVVPDKLARHSVIGKRASGRLPSGDTTGMNARRADAGEEETGLLARARVVLVHLSEVLRDEGEEVYFAAFEAHDYGNYRCLDEDGFVDAIGTLAPEVTAEQVHDVFLVRSRIEASDDKANYDELFKDLRKLAQIGGFLSGDAVELRVESRGGRVDWVPAQVVSRDGDGTYTVRFKSPTKVPGA 393
            GRFGK P TRAGGLA TMPVQGTLGQRPKPFFATALMLSRSDD PASE GSPF+GWGAGKSRRGTGRTDSIFTQGPNDPGVEA IQ KV+TLISRRGPELEALLLLRDPERSGNIPVKAFSECLRAW SSDSERGGGGA   TRAGKR+GPSQAAELTHADRKVLYRRW VRGQVRYVDFLGASGYFNAPLPRYSEISTAVAAAPAA+AAPVV D  ARH V  KRASG L SGD  GM+AR ADAGEEETGLL R+RVVLVHLSEVLRDEGEE YFAAFEA DYGNYRCLDEDGFVDAI TLAPEVTAEQVHDVFLVRSRIE SDDKANYDELFKDLRKLAQIGGF SGDAVELRVESRG RVDWVPAQVVSRDGDGTYTVRFKSPTKVPGA
Sbjct:  241 GRFGKCPTTRAGGLACTMPVQGTLGQRPKPFFATALMLSRSDDPPASERGSPFDGWGAGKSRRGTGRTDSIFTQGPNDPGVEAPIQEKVSTLISRRGPELEALLLLRDPERSGNIPVKAFSECLRAWASSDSERGGGGAG--TRAGKREGPSQAAELTHADRKVLYRRWVVRGQVRYVDFLGASGYFNAPLPRYSEISTAVAAAPAAAAAPVVTDAPARHPVTRKRASGSLLSGDKAGMHARNADAGEEETGLLERSRVVLVHLSEVLRDEGEEAYFAAFEAQDYGNYRCLDEDGFVDAIETLAPEVTAEQVHDVFLVRSRIEGSDDKANYDELFKDLRKLAQIGGFQSGDAVELRVESRGSRVDWVPAQVVSRDGDGTYTVRFKSPTKVPGA 631          
BLAST of mRNA_Ecto-sp13_S_contig14587.3517.1 vs. uniprot
Match: A0A6H5JE59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE59_9PHAE)

HSP 1 Score: 594 bits (1532), Expect = 4.820e-211
Identity = 314/375 (83.73%), Postives = 324/375 (86.40%), Query Frame = 0
Query:   37 MLSRSDDSPASEGGSPFEGWGAGKSRRGTGRTDSIFTQGPNDPGVEAVIQAKVTTLISRRGPELEALLLLRDPERSGNIPVKAFSECLRAWVSSDSERGGGGAADHTRAGKRDGPSQAAELTHADRKVLYRRWAVRGQVRYVDFLGASGYFNAPLPRYSEISTAVAAAPAASAAPVVPDKLARHSVIGKRASGRLPSGDTTGMNARRADAGEEETGLLARARVVLVHLSEVLRDEGEEVYFAAFEAHDYGNYRCLDEDGFVDAIGTLAPEVTAEQVHDVFLVRSRIEASDDKANYDELFK------------------DLRKLAQIGGFLSGDAVELRVESRGGRVDWVPAQVVSRDGDGTYTVRFKSPTKVPGA 393
            MLSRSDDSPASEGGSPF+GWGAGK+RRGTGRTDSIFTQG NDPGVEA +Q K+ TLISRRGPELEALLLLRDPERSG+I VK FSECLRAWVSSDSE GGGG    TR GKR+GPSQAAELTHADRKVLYRRWAVRGQVRYVDFLGASG FNAPLPRYSEISTAVAAAP      VV DK ARH V GKRASGRLPSGD  GM+AR ADAGEEET L ARARVVLVHLSEVLRDEGEE YFAAFEA DYGNYRCLDEDGFV+AI TLAPEVTAEQVHDVFLVRSRIE SDDKANYDELFK                  DLRKLAQIGGF SGDAVELRVESRGGRVDWVPAQVVSRDGDGT+TVRF+SPTKVPGA
Sbjct:    1 MLSRSDDSPASEGGSPFDGWGAGKNRRGTGRTDSIFTQGRNDPGVEAAVQEKLATLISRRGPELEALLLLRDPERSGSISVKTFSECLRAWVSSDSEHGGGGTG--TRGGKREGPSQAAELTHADRKVLYRRWAVRGQVRYVDFLGASGCFNAPLPRYSEISTAVAAAPXXXXXXVVADKPARHPVTGKRASGRLPSGDKAGMHARNADAGEEETDLFARARVVLVHLSEVLRDEGEEAYFAAFEAQDYGNYRCLDEDGFVNAIETLAPEVTAEQVHDVFLVRSRIEGSDDKANYDELFKLGCAFPYPSPRPSITARKDLRKLAQIGGFQSGDAVELRVESRGGRVDWVPAQVVSRDGDGTFTVRFRSPTKVPGA 373          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14587.3517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKD6_ECTSI2.110e-24390.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JE59_9PHAE4.820e-21183.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14587contigEcto-sp13_S_contig14587:15..4380 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14587.3517.1mRNA_Ecto-sp13_S_contig14587.3517.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14587 15..4380 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14587.3517.1 ID=prot_Ecto-sp13_S_contig14587.3517.1|Name=mRNA_Ecto-sp13_S_contig14587.3517.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=393bp
GRFGKGPATRAGGLASTMPVQGTLGQRPKPFFATALMLSRSDDSPASEGG
SPFEGWGAGKSRRGTGRTDSIFTQGPNDPGVEAVIQAKVTTLISRRGPEL
EALLLLRDPERSGNIPVKAFSECLRAWVSSDSERGGGGAADHTRAGKRDG
PSQAAELTHADRKVLYRRWAVRGQVRYVDFLGASGYFNAPLPRYSEISTA
VAAAPAASAAPVVPDKLARHSVIGKRASGRLPSGDTTGMNARRADAGEEE
TGLLARARVVLVHLSEVLRDEGEEVYFAAFEAHDYGNYRCLDEDGFVDAI
GTLAPEVTAEQVHDVFLVRSRIEASDDKANYDELFKDLRKLAQIGGFLSG
DAVELRVESRGGRVDWVPAQVVSRDGDGTYTVRFKSPTKVPGA
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